RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	DEFB129	Q9H1M3	183 aa		12.52	□□□□□ -0.41
MRPL55-223	ENST00000459783	ZNF408	Q9H9D4	720 aa		12.52	□□□□□ -0.41
MRPL55-223	ENST00000459783	LRP2BP	Q9P2M1	347 aa		12.52	□□□□□ -0.41
MRPL55-223	ENST00000459783	FAM198A	Q9UFP1	575 aa		12.52	□□□□□ -0.41
MRPL55-223	ENST00000459783	FZD1	Q9UP38	647 aa		12.52	□□□□□ -0.41
MRPL55-223	ENST00000459783	ECM29	Q5VYK3	1845 aa		12.52	□□□□□ -0.41
MRPL55-223	ENST00000459783	DOCK2	Q92608	1830 aa		12.52	□□□□□ -0.41
MRPL55-223	ENST00000459783	GPR75-ASB3	A0A0A6YYF3	556 aa		12.51	□□□□□ -0.41
MRPL55-223	ENST00000459783	TMEM88B	A6NKF7	163 aa		12.51	□□□□□ -0.41
MRPL55-223	ENST00000459783	WDHD1	O75717	1129 aa	Predicted RBP	12.51	□□□□□ -0.41
MRPL55-223	ENST00000459783	IDH1	O75874	414 aa	Known RBP	12.51	□□□□□ -0.41
MRPL55-223	ENST00000459783	ZFPM1	Q8IX07	1006 aa		12.51	□□□□□ -0.41
MRPL55-223	ENST00000459783	TMEM39B	Q9GZU3	492 aa		12.51	□□□□□ -0.41
MRPL55-223	ENST00000459783	DDX4	Q9NQI0	724 aa	Known RBP	12.51	□□□□□ -0.41
MRPL55-223	ENST00000459783	CREBZF	Q9NS37	354 aa		12.51	□□□□□ -0.41
MRPL55-223	ENST00000459783	PAG1	Q9NWQ8	432 aa		12.51	□□□□□ -0.41
MRPL55-223	ENST00000459783	TCRBV5S4A2T	A0A5A2	114 aa		12.5	□□□□□ -0.41
MRPL55-223	ENST00000459783	MYO1B	O43795	1136 aa		12.5	□□□□□ -0.41
MRPL55-223	ENST00000459783	MX1	P20591	662 aa		12.5	□□□□□ -0.41
MRPL55-223	ENST00000459783	PDE4A	P27815	886 aa		12.5	□□□□□ -0.41
MRPL55-223	ENST00000459783	NBPF12	Q5TAG4	269 aa	Predicted RBP	12.5	□□□□□ -0.41
MRPL55-223	ENST00000459783	CHD1L	Q86WJ1	897 aa		12.5	□□□□□ -0.41
MRPL55-223	ENST00000459783	USP40	Q9NVE5	1235 aa		12.5	□□□□□ -0.41
MRPL55-223	ENST00000459783	STAP2	Q9UGK3	403 aa		12.5	□□□□□ -0.41
MRPL55-223	ENST00000459783	MYH2	Q9UKX2	1941 aa		12.5	□□□□□ -0.41
MRPL55-223	ENST00000459783	TRPM7	Q96QT4	1865 aa		12.49	□□□□□ -0.41
MRPL55-223	ENST00000459783	TTC41P	Q6P2S7	1318 aa		12.49	□□□□□ -0.41
MRPL55-223	ENST00000459783	MAP4K4	O95819	1239 aa	Predicted RBP	12.49	□□□□□ -0.41
MRPL55-223	ENST00000459783	SLURP2	P0DP57	97 aa		12.49	□□□□□ -0.41
MRPL55-223	ENST00000459783	PDE6A	P16499	860 aa		12.49	□□□□□ -0.41
MRPL55-223	ENST00000459783	CYP7A1	P22680	504 aa		12.49	□□□□□ -0.41
MRPL55-223	ENST00000459783	PDE1A	P54750	535 aa		12.49	□□□□□ -0.41
MRPL55-223	ENST00000459783	DYNLL1	P63167	89 aa	Known RBP	12.49	□□□□□ -0.41
MRPL55-223	ENST00000459783	COL13A1	Q5TAT6	717 aa	Predicted RBP	12.49	□□□□□ -0.41
MRPL55-223	ENST00000459783	NAA16	Q6N069	864 aa	Predicted RBP	12.49	□□□□□ -0.41
MRPL55-223	ENST00000459783	SH3BP5L	Q7L8J4	393 aa		12.49	□□□□□ -0.41
MRPL55-223	ENST00000459783	MAGEB6	Q8N7X4	407 aa		12.49	□□□□□ -0.41
MRPL55-223	ENST00000459783	GBA2	Q9HCG7	927 aa	Predicted RBP	12.49	□□□□□ -0.41
MRPL55-223	ENST00000459783	TLL2	Q9Y6L7	1015 aa		12.49	□□□□□ -0.41
MRPL55-223	ENST00000459783	RASSF10	A6NK89	507 aa		12.48	□□□□□ -0.41
MRPL55-223	ENST00000459783	PPP4C	P60510	307 aa		12.48	□□□□□ -0.41
MRPL55-223	ENST00000459783	GSTO1	P78417	241 aa		12.48	□□□□□ -0.41
MRPL55-223	ENST00000459783	TCP10	Q12799	353 aa		12.48	□□□□□ -0.41
MRPL55-223	ENST00000459783	FKBP1C	Q5VVH2	108 aa		12.48	□□□□□ -0.41
MRPL55-223	ENST00000459783	SAPCD2	Q86UD0	394 aa		12.48	□□□□□ -0.41
MRPL55-223	ENST00000459783	PLEKHM2	Q8IWE5	1019 aa		12.48	□□□□□ -0.41
MRPL55-223	ENST00000459783	MIGA1	Q8NAN2	632 aa		12.48	□□□□□ -0.41
MRPL55-223	ENST00000459783	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	12.48	□□□□□ -0.41
MRPL55-223	ENST00000459783	IDI2	Q9BXS1	227 aa		12.48	□□□□□ -0.41
MRPL55-223	ENST00000459783	AATF	Q9NY61	560 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
MRPL55-223	ENST00000459783	MKRN1	Q9UHC7	482 aa	Known RBP	12.48	□□□□□ -0.41
MRPL55-223	ENST00000459783	PPP2R3B	Q9Y5P8	575 aa		12.48	□□□□□ -0.41
MRPL55-223	ENST00000459783	ATRNL1	Q5VV63	1379 aa		12.47	□□□□□ -0.41
MRPL55-223	ENST00000459783	ZNF532	Q9HCE3	1301 aa		12.47	□□□□□ -0.41
MRPL55-223	ENST00000459783	CENPB	P07199	599 aa	Predicted RBP	12.47	□□□□□ -0.41
MRPL55-223	ENST00000459783	LDHC	P07864	332 aa		12.47	□□□□□ -0.41
MRPL55-223	ENST00000459783	RGS3	P49796	1198 aa		12.47	□□□□□ -0.41
MRPL55-223	ENST00000459783	MAP3K12	Q12852	859 aa		12.47	□□□□□ -0.41
MRPL55-223	ENST00000459783	PRKG1	Q13976	671 aa		12.47	□□□□□ -0.41
MRPL55-223	ENST00000459783	TTF1	Q15361	905 aa	Predicted RBP	12.47	□□□□□ -0.41
MRPL55-223	ENST00000459783	SLC9C2	Q5TAH2	1124 aa		12.47	□□□□□ -0.41
MRPL55-223	ENST00000459783	FAM83A	Q86UY5	434 aa		12.47	□□□□□ -0.41
MRPL55-223	ENST00000459783	SKAP1	Q86WV1	359 aa		12.47	□□□□□ -0.41
MRPL55-223	ENST00000459783	SLF2	Q8IX21	1173 aa		12.47	□□□□□ -0.41
MRPL55-223	ENST00000459783	RIOK1	Q9BRS2	568 aa	Known RBP	12.47	□□□□□ -0.41
MRPL55-223	ENST00000459783	PAPPA2	Q9BXP8	1791 aa		12.47	□□□□□ -0.41
MRPL55-223	ENST00000459783	RPAP1	Q9BWH6	1393 aa	Predicted RBP	12.46	□□□□□ -0.41
MRPL55-223	ENST00000459783	DDTL	A6NHG4	134 aa	Predicted RBP	12.46	□□□□□ -0.41
MRPL55-223	ENST00000459783	UBE2Q2L	H0YL09	131 aa		12.46	□□□□□ -0.41
MRPL55-223	ENST00000459783	GLRX3	O76003	335 aa	Known RBP	12.46	□□□□□ -0.41
MRPL55-223	ENST00000459783	ADD2	P35612	726 aa		12.46	□□□□□ -0.41
MRPL55-223	ENST00000459783	TNFAIP1	Q13829	316 aa		12.46	□□□□□ -0.41
MRPL55-223	ENST00000459783	KBTBD3	Q8NAB2	608 aa		12.46	□□□□□ -0.41
MRPL55-223	ENST00000459783	FAM151A	Q8WW52	585 aa		12.46	□□□□□ -0.41
MRPL55-223	ENST00000459783	GPATCH3	Q96I76	525 aa		12.46	□□□□□ -0.41
MRPL55-223	ENST00000459783	TMOD2	Q9NZR1	351 aa		12.46	□□□□□ -0.41
MRPL55-223	ENST00000459783	ABT1	Q9ULW3	272 aa	Known RBP	12.46	□□□□□ -0.41
MRPL55-223	ENST00000459783	IGSF3	O75054	1194 aa		12.45	□□□□□ -0.42
MRPL55-223	ENST00000459783	ENTPD3	O75355	529 aa		12.45	□□□□□ -0.42
MRPL55-223	ENST00000459783	USP2	O75604	605 aa	Predicted RBP	12.45	□□□□□ -0.42
MRPL55-223	ENST00000459783	VEGFB	P49765	207 aa		12.45	□□□□□ -0.42
MRPL55-223	ENST00000459783	HUNK	P57058	714 aa		12.45	□□□□□ -0.42
MRPL55-223	ENST00000459783	PICALM	Q13492	652 aa		12.45	□□□□□ -0.42
MRPL55-223	ENST00000459783	CYP4F22	Q6NT55	531 aa		12.45	□□□□□ -0.42
MRPL55-223	ENST00000459783	TEX11	Q8IYF3	940 aa		12.45	□□□□□ -0.42
MRPL55-223	ENST00000459783	LCORL	Q8N3X6	602 aa		12.45	□□□□□ -0.42
MRPL55-223	ENST00000459783	KLRG1	Q96E93	195 aa		12.45	□□□□□ -0.42
MRPL55-223	ENST00000459783	ZIC5	Q96T25	663 aa		12.45	□□□□□ -0.42
MRPL55-223	ENST00000459783	FAM155A	B1AL88	458 aa	Predicted RBP	12.44	□□□□□ -0.42
MRPL55-223	ENST00000459783	ERC2	O15083	957 aa		12.44	□□□□□ -0.42
MRPL55-223	ENST00000459783	TNNI2	P48788	182 aa		12.44	□□□□□ -0.42
MRPL55-223	ENST00000459783	MAP3K11	Q16584	847 aa		12.44	□□□□□ -0.42
MRPL55-223	ENST00000459783	LDLRAD1	Q5T700	205 aa		12.44	□□□□□ -0.42
MRPL55-223	ENST00000459783	C2orf69	Q8N8R5	385 aa		12.44	□□□□□ -0.42
MRPL55-223	ENST00000459783	CLMN	Q96JQ2	1002 aa		12.44	□□□□□ -0.42
MRPL55-223	ENST00000459783	PUS7L	Q9H0K6	701 aa	Known RBP	12.44	□□□□□ -0.42
MRPL55-223	ENST00000459783	OSBPL3	Q9H4L5	887 aa		12.44	□□□□□ -0.42
MRPL55-223	ENST00000459783	FLT1	P17948	1338 aa		12.43	□□□□□ -0.42
MRPL55-223	ENST00000459783	NPM3	O75607	178 aa	Known RBP	12.43	□□□□□ -0.42
MRPL55-223	ENST00000459783	FKBP1B	P68106	108 aa		12.43	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 72 ms