RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 NMIQ13287 307 aaPredicted RBP10.73□□□□□ -0.69
VPS50-207ENST00000458530 RNF20Q5VTR2 975 aa10.73□□□□□ -0.69
VPS50-207ENST00000458530 CCDC102BQ68D86 513 aa10.73□□□□□ -0.69
VPS50-207ENST00000458530 USP50Q70EL3 339 aaPredicted RBP10.73□□□□□ -0.69
VPS50-207ENST00000458530 SAPCD2Q86UD0 394 aa10.73□□□□□ -0.69
VPS50-207ENST00000458530 SNX21Q969T3 373 aa10.73□□□□□ -0.69
VPS50-207ENST00000458530 SNRKQ9NRH2 765 aa10.73□□□□□ -0.69
VPS50-207ENST00000458530 HELLSQ9NRZ9 838 aa10.73□□□□□ -0.69
VPS50-207ENST00000458530 TAOK2Q9UL54 1235 aa10.73□□□□□ -0.69
VPS50-207ENST00000458530 CCDC171Q6TFL3 1326 aa10.73□□□□□ -0.69
VPS50-207ENST00000458530 MED23Q9ULK4 1368 aa10.73□□□□□ -0.69
VPS50-207ENST00000458530 TRAF5O00463 557 aa10.72□□□□□ -0.69
VPS50-207ENST00000458530 SEMA3EO15041 775 aa10.72□□□□□ -0.69
VPS50-207ENST00000458530 AOC2O75106 756 aa10.72□□□□□ -0.69
VPS50-207ENST00000458530 ALDH1B1P30837 517 aa10.72□□□□□ -0.69
VPS50-207ENST00000458530 MCMDC2Q4G0Z9 681 aa10.72□□□□□ -0.69
VPS50-207ENST00000458530 VPS37DQ86XT2 251 aa10.72□□□□□ -0.69
VPS50-207ENST00000458530 HELBQ8NG08 1087 aaPredicted RBP10.72□□□□□ -0.69
VPS50-207ENST00000458530 CELF1Q92879 486 aaKnown RBP10.72□□□□□ -0.69
VPS50-207ENST00000458530 CRAMP1Q96RY5 1269 aa10.72□□□□□ -0.69
VPS50-207ENST00000458530 BEGAINQ9BUH8 593 aa10.72□□□□□ -0.69
VPS50-207ENST00000458530 PGAP2Q9UHJ9 254 aa10.72□□□□□ -0.69
VPS50-207ENST00000458530 MINPP1Q9UNW1 487 aa10.72□□□□□ -0.69
VPS50-207ENST00000458530 COL4A1P02462 1669 aa10.72□□□□□ -0.69
VPS50-207ENST00000458530 RNF113AO15541 343 aaKnown RBP10.71□□□□□ -0.69
VPS50-207ENST00000458530 IGSF3O75054 1194 aa10.71□□□□□ -0.69
VPS50-207ENST00000458530 TAF5LO75529 589 aa10.71□□□□□ -0.69
VPS50-207ENST00000458530 BBOX1O75936 387 aa10.71□□□□□ -0.69
VPS50-207ENST00000458530 ZKSCAN1P17029 563 aaPredicted RBP10.71□□□□□ -0.69
VPS50-207ENST00000458530 HOXA10P31260 410 aaPredicted RBP10.71□□□□□ -0.69
VPS50-207ENST00000458530 XDHP47989 1333 aa10.71□□□□□ -0.69
VPS50-207ENST00000458530 LAMA4Q16363 1823 aa10.71□□□□□ -0.69
VPS50-207ENST00000458530 PDS5AQ29RF7 1337 aaKnown RBP10.71□□□□□ -0.69
VPS50-207ENST00000458530 CC2D2BQ6DHV5 1058 aa10.71□□□□□ -0.69
VPS50-207ENST00000458530 MFRPQ9BY79 579 aa10.71□□□□□ -0.69
VPS50-207ENST00000458530 LSG1Q9H089 658 aaKnown RBP10.71□□□□□ -0.69
VPS50-207ENST00000458530 TMX4Q9H1E5 349 aaPredicted RBP10.71□□□□□ -0.69
VPS50-207ENST00000458530 HMG20BQ9P0W2 317 aa10.71□□□□□ -0.69
VPS50-207ENST00000458530 TSKSQ9UJT2 592 aa10.71□□□□□ -0.69
VPS50-207ENST00000458530 LEMD3Q9Y2U8 911 aa10.71□□□□□ -0.69
VPS50-207ENST00000458530 ZNF804BA4D1E1 1349 aa10.7□□□□□ -0.7
VPS50-207ENST00000458530 A0A0D9SFI3 127 aa10.7□□□□□ -0.7
VPS50-207ENST00000458530 HSPA4P34932 840 aa10.7□□□□□ -0.7
VPS50-207ENST00000458530 MCAMP43121 646 aa10.7□□□□□ -0.7
VPS50-207ENST00000458530 ZAP70P43403 619 aa10.7□□□□□ -0.7
VPS50-207ENST00000458530 PHKA1P46020 1223 aa10.7□□□□□ -0.7
VPS50-207ENST00000458530 MCM2P49736 904 aa10.7□□□□□ -0.7
VPS50-207ENST00000458530 MAP3K12Q12852 859 aa10.7□□□□□ -0.7
VPS50-207ENST00000458530 GRIPAP1Q4V328 841 aa10.7□□□□□ -0.7
VPS50-207ENST00000458530 ZMYM1Q5SVZ6 1142 aa10.7□□□□□ -0.7
VPS50-207ENST00000458530 TMED8Q6PL24 325 aaPredicted RBP10.7□□□□□ -0.7
VPS50-207ENST00000458530 MICALL2Q8IY33 904 aa10.7□□□□□ -0.7
VPS50-207ENST00000458530 SPATA5Q8NB90 893 aa10.7□□□□□ -0.7
VPS50-207ENST00000458530 FBXO22Q8NEZ5 403 aa10.7□□□□□ -0.7
VPS50-207ENST00000458530 JDP2Q8WYK2 163 aa10.7□□□□□ -0.7
VPS50-207ENST00000458530 IL17RAQ96F46 866 aa10.7□□□□□ -0.7
VPS50-207ENST00000458530 DENND2AQ9ULE3 1009 aa10.7□□□□□ -0.7
VPS50-207ENST00000458530 CASP8AP2Q9UKL3 1982 aa10.7□□□□□ -0.7
VPS50-207ENST00000458530 ATP2B4P23634 1241 aa10.69□□□□□ -0.7
VPS50-207ENST00000458530 EIF6P56537 245 aaKnown RBP10.69□□□□□ -0.7
VPS50-207ENST00000458530 WASHC4Q2M389 1173 aa10.69□□□□□ -0.7
VPS50-207ENST00000458530 APPBP2Q92624 585 aa10.69□□□□□ -0.7
VPS50-207ENST00000458530 EDC3Q96F86 508 aaKnown RBP10.69□□□□□ -0.7
VPS50-207ENST00000458530 FAM227BQ96M60 508 aa10.69□□□□□ -0.7
VPS50-207ENST00000458530 TMEM121BQ9BXQ6 578 aaPredicted RBP10.69□□□□□ -0.7
VPS50-207ENST00000458530 ANKIB1Q9P2G1 1089 aa10.69□□□□□ -0.7
VPS50-207ENST00000458530 FRAT2O75474 233 aaPredicted RBP10.68□□□□□ -0.7
VPS50-207ENST00000458530 LMOD1P29536 600 aaPredicted RBP10.68□□□□□ -0.7
VPS50-207ENST00000458530 KRT32Q14532 448 aa10.68□□□□□ -0.7
VPS50-207ENST00000458530 UBE3CQ15386 1083 aa10.68□□□□□ -0.7
VPS50-207ENST00000458530 ZNF804AQ7Z570 1209 aa10.68□□□□□ -0.7
VPS50-207ENST00000458530 ZGPATQ8N5A5 531 aaKnown RBP10.68□□□□□ -0.7
VPS50-207ENST00000458530 MAP4K1Q92918 833 aa10.68□□□□□ -0.7
VPS50-207ENST00000458530 KIF2CQ99661 725 aa10.68□□□□□ -0.7
VPS50-207ENST00000458530 DSCC1Q9BVC3 393 aa10.68□□□□□ -0.7
VPS50-207ENST00000458530 TBC1D2Q9BYX2 928 aa10.68□□□□□ -0.7
VPS50-207ENST00000458530 ADARB2Q9NS39 739 aaKnown RBP10.68□□□□□ -0.7
VPS50-207ENST00000458530 GPRC5DQ9NZD1 345 aa10.68□□□□□ -0.7
VPS50-207ENST00000458530 K7ELQ4 463 aaPredicted RBP10.67□□□□□ -0.7
VPS50-207ENST00000458530 PPEF1O14829 653 aaPredicted RBP10.67□□□□□ -0.7
VPS50-207ENST00000458530 IDH1O75874 414 aaKnown RBP10.67□□□□□ -0.7
VPS50-207ENST00000458530 HSP90AA1P07900 732 aaKnown RBP10.67□□□□□ -0.7
VPS50-207ENST00000458530 PSMA5P28066 241 aa10.67□□□□□ -0.7
VPS50-207ENST00000458530 HIBADHP31937 336 aaKnown RBP10.67□□□□□ -0.7
VPS50-207ENST00000458530 RASGRF1Q13972 1273 aa10.67□□□□□ -0.7
VPS50-207ENST00000458530 SCARF1Q14162 830 aa10.67□□□□□ -0.7
VPS50-207ENST00000458530 TMEM92Q6UXU6 159 aa10.67□□□□□ -0.7
VPS50-207ENST00000458530 C15orf52Q6ZUT6 534 aaKnown RBP10.67□□□□□ -0.7
VPS50-207ENST00000458530 SLC51AQ86UW1 340 aa10.67□□□□□ -0.7
VPS50-207ENST00000458530 VPS33BQ9H267 617 aa10.67□□□□□ -0.7
VPS50-207ENST00000458530 CTNNA3Q9UI47 895 aa10.67□□□□□ -0.7
VPS50-207ENST00000458530 GGA1Q9UJY5 639 aa10.67□□□□□ -0.7
VPS50-207ENST00000458530 RBM8AQ9Y5S9 174 aaKnown RBP10.67□□□□□ -0.7
VPS50-207ENST00000458530 GJA3Q9Y6H8 435 aa10.67□□□□□ -0.7
VPS50-207ENST00000458530 NDUFB9Q9Y6M9 179 aa10.67□□□□□ -0.7
VPS50-207ENST00000458530 MAST3O60307 1309 aa10.66□□□□□ -0.7
VPS50-207ENST00000458530 CELF2O95319 508 aaKnown RBP10.66□□□□□ -0.7
VPS50-207ENST00000458530 CYP2E1P05181 493 aaPredicted RBP10.66□□□□□ -0.7
VPS50-207ENST00000458530 ADD2P35612 726 aa10.66□□□□□ -0.7
VPS50-207ENST00000458530 BCAMP50895 628 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms