RNA–Protein interactions for RNA: ENST00000458337.5

COMMD1-206, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-206ENST00000458337 MYH2Q9UKX2 1941 aa16.35■□□□□ 0.21
COMMD1-206ENST00000458337 CACNB3P54284 484 aa16.35■□□□□ 0.21
COMMD1-206ENST00000458337 MECOMQ03112 1051 aa16.35■□□□□ 0.21
COMMD1-206ENST00000458337 TTC39AQ5SRH9 613 aa16.35■□□□□ 0.21
COMMD1-206ENST00000458337 TBC1D9Q6ZT07 1266 aa16.35■□□□□ 0.21
COMMD1-206ENST00000458337 RASAL3Q86YV0 1011 aa16.35■□□□□ 0.21
COMMD1-206ENST00000458337 NSUN4Q96CB9 384 aaKnown RBP16.35■□□□□ 0.21
COMMD1-206ENST00000458337 USP40Q9NVE5 1235 aa16.35■□□□□ 0.21
COMMD1-206ENST00000458337 TLR7Q9NYK1 1049 aaKnown RBP16.35■□□□□ 0.21
COMMD1-206ENST00000458337 TMOD2Q9NZR1 351 aa16.35■□□□□ 0.21
COMMD1-206ENST00000458337 ANGEL1Q9UNK9 670 aaKnown RBP16.35■□□□□ 0.21
COMMD1-206ENST00000458337 GPR75-ASB3A0A0A6YYF3 556 aa16.34■□□□□ 0.21
COMMD1-206ENST00000458337 CYP2E1P05181 493 aaPredicted RBP16.34■□□□□ 0.21
COMMD1-206ENST00000458337 KIF23Q02241 960 aaPredicted RBP16.34■□□□□ 0.21
COMMD1-206ENST00000458337 PRKG1Q13976 671 aa16.34■□□□□ 0.21
COMMD1-206ENST00000458337 DZIP1Q86YF9 867 aaKnown RBP16.34■□□□□ 0.21
COMMD1-206ENST00000458337 CDAN1Q8IWY9 1227 aa16.34■□□□□ 0.21
COMMD1-206ENST00000458337 REM2Q8IYK8 340 aaPredicted RBP16.34■□□□□ 0.21
COMMD1-206ENST00000458337 FAM151AQ8WW52 585 aa16.34■□□□□ 0.21
COMMD1-206ENST00000458337 AIDAQ96BJ3 306 aa16.34■□□□□ 0.21
COMMD1-206ENST00000458337 FZD1Q9UP38 647 aa16.34■□□□□ 0.21
COMMD1-206ENST00000458337 LDHCP07864 332 aa16.33■□□□□ 0.2
COMMD1-206ENST00000458337 CTCFP49711 727 aaPredicted RBP16.33■□□□□ 0.2
COMMD1-206ENST00000458337 AACSQ86V21 672 aa16.33■□□□□ 0.2
COMMD1-206ENST00000458337 CLASRPQ8N2M8 674 aaKnown RBP16.33■□□□□ 0.2
COMMD1-206ENST00000458337 CSRNP1Q96S65 589 aa16.33■□□□□ 0.2
COMMD1-206ENST00000458337 IDI2Q9BXS1 227 aa16.33■□□□□ 0.2
COMMD1-206ENST00000458337 IL1RAPL2Q9NP60 686 aa16.33■□□□□ 0.2
COMMD1-206ENST00000458337 SNRKQ9NRH2 765 aa16.33■□□□□ 0.2
COMMD1-206ENST00000458337 MROH7-TTC4A0A0A0MT08 1334 aa16.32■□□□□ 0.2
COMMD1-206ENST00000458337 CA12O43570 354 aa16.32■□□□□ 0.2
COMMD1-206ENST00000458337 MAP4K4O95819 1239 aaPredicted RBP16.32■□□□□ 0.2
COMMD1-206ENST00000458337 ZAP70P43403 619 aa16.32■□□□□ 0.2
COMMD1-206ENST00000458337 IREB2P48200 963 aaKnown RBP16.32■□□□□ 0.2
COMMD1-206ENST00000458337 GSTO1P78417 241 aa16.32■□□□□ 0.2
COMMD1-206ENST00000458337 NFIAQ12857 509 aa16.32■□□□□ 0.2
COMMD1-206ENST00000458337 SLC10A4Q96EP9 437 aa16.32■□□□□ 0.2
COMMD1-206ENST00000458337 BEGAINQ9BUH8 593 aa16.32■□□□□ 0.2
COMMD1-206ENST00000458337 DCTPP1Q9H773 170 aa16.32■□□□□ 0.2
COMMD1-206ENST00000458337 PRDM10Q9NQV6 1147 aa16.32■□□□□ 0.2
COMMD1-206ENST00000458337 LRP2BPQ9P2M1 347 aa16.32■□□□□ 0.2
COMMD1-206ENST00000458337 FAM198AQ9UFP1 575 aa16.32■□□□□ 0.2
COMMD1-206ENST00000458337 RPAP1Q9BWH6 1393 aaPredicted RBP16.31■□□□□ 0.2
COMMD1-206ENST00000458337 NPM3O75607 178 aaKnown RBP16.31■□□□□ 0.2
COMMD1-206ENST00000458337 ANKRD13AQ8IZ07 590 aa16.31■□□□□ 0.2
COMMD1-206ENST00000458337 HOOK2Q96ED9 719 aa16.31■□□□□ 0.2
COMMD1-206ENST00000458337 RAI14Q9P0K7 980 aa16.31■□□□□ 0.2
COMMD1-206ENST00000458337 PCDHB15Q9Y5E8 787 aa16.31■□□□□ 0.2
COMMD1-206ENST00000458337 APBB1O00213 710 aa16.3■□□□□ 0.2
COMMD1-206ENST00000458337 ENTPD3O75355 529 aa16.3■□□□□ 0.2
COMMD1-206ENST00000458337 HSPA8P11142 646 aaKnown RBP16.3■□□□□ 0.2
COMMD1-206ENST00000458337 BTDP43251 543 aa16.3■□□□□ 0.2
COMMD1-206ENST00000458337 TM4SF4P48230 202 aa16.3■□□□□ 0.2
COMMD1-206ENST00000458337 RHBDL3P58872 404 aa16.3■□□□□ 0.2
COMMD1-206ENST00000458337 COL13A1Q5TAT6 717 aaPredicted RBP16.3■□□□□ 0.2
COMMD1-206ENST00000458337 SPRYD7Q5W111 196 aa16.3■□□□□ 0.2
COMMD1-206ENST00000458337 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.3■□□□□ 0.2
COMMD1-206ENST00000458337 CLMNQ96JQ2 1002 aa16.3■□□□□ 0.2
COMMD1-206ENST00000458337 WDHD1O75717 1129 aaPredicted RBP16.29■□□□□ 0.2
COMMD1-206ENST00000458337 PPP4CP60510 307 aa16.29■□□□□ 0.2
COMMD1-206ENST00000458337 MAP3K9P80192 1104 aa16.29■□□□□ 0.2
COMMD1-206ENST00000458337 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.29■□□□□ 0.2
COMMD1-206ENST00000458337 ZFPM1Q8IX07 1006 aa16.29■□□□□ 0.2
COMMD1-206ENST00000458337 PIH1D3Q9NQM4 214 aaKnown RBP16.29■□□□□ 0.2
COMMD1-206ENST00000458337 RFX7Q2KHR2 1363 aa16.28■□□□□ 0.2
COMMD1-206ENST00000458337 IFIT2P09913 472 aaKnown RBP16.28■□□□□ 0.2
COMMD1-206ENST00000458337 ZBTB48P10074 688 aaPredicted RBP16.28■□□□□ 0.2
COMMD1-206ENST00000458337 RGS3P49796 1198 aa16.28■□□□□ 0.2
COMMD1-206ENST00000458337 LBX1P52954 281 aa16.28■□□□□ 0.2
COMMD1-206ENST00000458337 MAP3K10Q02779 954 aa16.28■□□□□ 0.2
COMMD1-206ENST00000458337 TCP10Q12799 353 aa16.28■□□□□ 0.2
COMMD1-206ENST00000458337 TMED8Q6PL24 325 aaPredicted RBP16.28■□□□□ 0.2
COMMD1-206ENST00000458337 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.28■□□□□ 0.2
COMMD1-206ENST00000458337 LRRCC1Q9C099 1032 aa16.28■□□□□ 0.2
COMMD1-206ENST00000458337 SAGE1Q9NXZ1 904 aa16.28■□□□□ 0.2
COMMD1-206ENST00000458337 ZNF112Q9UJU3 913 aa16.28■□□□□ 0.2
COMMD1-206ENST00000458337 MYO5AQ9Y4I1 1855 aaKnown RBP16.28■□□□□ 0.2
COMMD1-206ENST00000458337 INHBEP58166 350 aa16.27■□□□□ 0.2
COMMD1-206ENST00000458337 DCAF15Q66K64 600 aa16.27■□□□□ 0.2
COMMD1-206ENST00000458337 NAA16Q6N069 864 aaPredicted RBP16.27■□□□□ 0.2
COMMD1-206ENST00000458337 CRBNQ96SW2 442 aa16.27■□□□□ 0.2
COMMD1-206ENST00000458337 DDX4Q9NQI0 724 aaKnown RBP16.27■□□□□ 0.2
COMMD1-206ENST00000458337 RNF186Q9NXI6 227 aa16.27■□□□□ 0.2
COMMD1-206ENST00000458337 ATP5JP18859 108 aa16.26■□□□□ 0.19
COMMD1-206ENST00000458337 AAMPQ13685 434 aa16.26■□□□□ 0.19
COMMD1-206ENST00000458337 SH3BP5LQ7L8J4 393 aa16.26■□□□□ 0.19
COMMD1-206ENST00000458337 WNK4Q96J92 1243 aa16.26■□□□□ 0.19
COMMD1-206ENST00000458337 ANTXR1Q9H6X2 564 aa16.26■□□□□ 0.19
COMMD1-206ENST00000458337 NDUFB9Q9Y6M9 179 aa16.26■□□□□ 0.19
COMMD1-206ENST00000458337 AK9Q5TCS8 1911 aa16.25■□□□□ 0.19
COMMD1-206ENST00000458337 BAG3O95817 575 aa16.25■□□□□ 0.19
COMMD1-206ENST00000458337 GJA5P36382 358 aa16.25■□□□□ 0.19
COMMD1-206ENST00000458337 TTF1Q15361 905 aaPredicted RBP16.25■□□□□ 0.19
COMMD1-206ENST00000458337 ADGRA1Q86SQ6 560 aa16.25■□□□□ 0.19
COMMD1-206ENST00000458337 ZNF341Q9BYN7 854 aa16.25■□□□□ 0.19
COMMD1-206ENST00000458337 ATRNL1Q5VV63 1379 aa16.25■□□□□ 0.19
COMMD1-206ENST00000458337 DDTLA6NHG4 134 aaPredicted RBP16.24■□□□□ 0.19
COMMD1-206ENST00000458337 MANSC4A6NHS7 340 aaPredicted RBP16.24■□□□□ 0.19
COMMD1-206ENST00000458337 SMARCA5O60264 1052 aaPredicted RBP16.24■□□□□ 0.19
COMMD1-206ENST00000458337 TRPA1O75762 1119 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms