RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 BIRC2Q13490 618 aa6.59□□□□□ -1.35
HMGB4-202ENST00000458277 CDC37Q16543 378 aaPredicted RBP6.59□□□□□ -1.35
HMGB4-202ENST00000458277 ZSCAN26Q16670 478 aa6.59□□□□□ -1.35
HMGB4-202ENST00000458277 CCDC27Q2M243 656 aa6.59□□□□□ -1.35
HMGB4-202ENST00000458277 LEKR1Q6ZMV7 388 aa6.59□□□□□ -1.35
HMGB4-202ENST00000458277 SRLQ86TD4 932 aa6.59□□□□□ -1.35
HMGB4-202ENST00000458277 ERC1Q8IUD2 1116 aa6.59□□□□□ -1.35
HMGB4-202ENST00000458277 EFCAB13Q8IY85 973 aa6.59□□□□□ -1.35
HMGB4-202ENST00000458277 EXOC8Q8IYI6 725 aa6.59□□□□□ -1.35
HMGB4-202ENST00000458277 KLHL23Q8NBE8 558 aa6.59□□□□□ -1.35
HMGB4-202ENST00000458277 CCDC112Q8NEF3 446 aa6.59□□□□□ -1.35
HMGB4-202ENST00000458277 FBXO18Q8NFZ0 1043 aa6.59□□□□□ -1.35
HMGB4-202ENST00000458277 GIMAP7Q8NHV1 300 aa6.59□□□□□ -1.35
HMGB4-202ENST00000458277 CHMP4CQ96CF2 233 aa6.59□□□□□ -1.35
HMGB4-202ENST00000458277 SLC4A9Q96Q91 983 aa6.59□□□□□ -1.35
HMGB4-202ENST00000458277 KRTAP4-11Q9BYQ6 195 aa6.59□□□□□ -1.35
HMGB4-202ENST00000458277 CWC22Q9HCG8 908 aaKnown RBP6.59□□□□□ -1.35
HMGB4-202ENST00000458277 BRD7Q9NPI1 651 aa6.59□□□□□ -1.35
HMGB4-202ENST00000458277 KIF15Q9NS87 1388 aa6.58□□□□□ -1.36
HMGB4-202ENST00000458277 MYBBP1AQ9BQG0 1328 aaKnown RBP6.58□□□□□ -1.36
HMGB4-202ENST00000458277 ERICH4A6NGS2 130 aa6.58□□□□□ -1.36
HMGB4-202ENST00000458277 TMEM229AB2RXF0 380 aa6.58□□□□□ -1.36
HMGB4-202ENST00000458277 PTCD1O75127 700 aaKnown RBP6.58□□□□□ -1.36
HMGB4-202ENST00000458277 RGS9O75916 674 aaPredicted RBP6.58□□□□□ -1.36
HMGB4-202ENST00000458277 BAG4O95429 457 aaKnown RBP6.58□□□□□ -1.36
HMGB4-202ENST00000458277 DHX8Q14562 1220 aaKnown RBP6.58□□□□□ -1.36
HMGB4-202ENST00000458277 RBBP5Q15291 538 aaKnown RBP6.58□□□□□ -1.36
HMGB4-202ENST00000458277 ZSCAN23Q3MJ62 389 aa6.58□□□□□ -1.36
HMGB4-202ENST00000458277 CCDC184Q52MB2 194 aa6.58□□□□□ -1.36
HMGB4-202ENST00000458277 WWC2Q6AWC2 1192 aa6.58□□□□□ -1.36
HMGB4-202ENST00000458277 FBXO11Q86XK2 927 aa6.58□□□□□ -1.36
HMGB4-202ENST00000458277 C10orf67Q8IYJ2 551 aa6.58□□□□□ -1.36
HMGB4-202ENST00000458277 TMTC2Q8N394 836 aa6.58□□□□□ -1.36
HMGB4-202ENST00000458277 ZNF513Q8N8E2 541 aaPredicted RBP6.58□□□□□ -1.36
HMGB4-202ENST00000458277 ZDHHC1Q8WTX9 485 aa6.58□□□□□ -1.36
HMGB4-202ENST00000458277 DNAAF4Q8WXU2 420 aa6.58□□□□□ -1.36
HMGB4-202ENST00000458277 L3MBTL2Q969R5 705 aa6.58□□□□□ -1.36
HMGB4-202ENST00000458277 CALR3Q96L12 384 aaKnown RBP6.58□□□□□ -1.36
HMGB4-202ENST00000458277 DRC1Q96MC2 740 aa6.58□□□□□ -1.36
HMGB4-202ENST00000458277 CEP63Q96MT8 703 aa6.58□□□□□ -1.36
HMGB4-202ENST00000458277 C22orf23Q9BZE7 217 aa6.58□□□□□ -1.36
HMGB4-202ENST00000458277 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.58□□□□□ -1.36
HMGB4-202ENST00000458277 NLRP1Q9C000 1473 aa6.58□□□□□ -1.36
HMGB4-202ENST00000458277 PLEKHG2Q9H7P9 1386 aa6.57□□□□□ -1.36
HMGB4-202ENST00000458277 HMGB1P1B2RPK0 211 aaPredicted RBP6.57□□□□□ -1.36
HMGB4-202ENST00000458277 EML1O00423 815 aa6.57□□□□□ -1.36
HMGB4-202ENST00000458277 MAGEA8P43361 318 aa6.57□□□□□ -1.36
HMGB4-202ENST00000458277 CD151P48509 253 aa6.57□□□□□ -1.36
HMGB4-202ENST00000458277 SRPK2P78362 688 aaKnown RBP6.57□□□□□ -1.36
HMGB4-202ENST00000458277 ADCY2Q08462 1091 aa6.57□□□□□ -1.36
HMGB4-202ENST00000458277 NCBP1Q09161 790 aaKnown RBP6.57□□□□□ -1.36
HMGB4-202ENST00000458277 PDE3AQ14432 1141 aa6.57□□□□□ -1.36
HMGB4-202ENST00000458277 CDCA8Q53HL2 280 aa6.57□□□□□ -1.36
HMGB4-202ENST00000458277 ZC3H12AQ5D1E8 599 aaKnown RBP6.57□□□□□ -1.36
HMGB4-202ENST00000458277 LCE4AQ5TA78 99 aa6.57□□□□□ -1.36
HMGB4-202ENST00000458277 MSL1Q68DK7 614 aa6.57□□□□□ -1.36
HMGB4-202ENST00000458277 ILDR2Q71H61 639 aa6.57□□□□□ -1.36
HMGB4-202ENST00000458277 CCDC191Q8NCU4 936 aa6.57□□□□□ -1.36
HMGB4-202ENST00000458277 SNRNP27Q8WVK2 155 aaKnown RBP6.57□□□□□ -1.36
HMGB4-202ENST00000458277 TCP11Q8WWU5 503 aa6.57□□□□□ -1.36
HMGB4-202ENST00000458277 EXOC4Q96A65 974 aa6.57□□□□□ -1.36
HMGB4-202ENST00000458277 ERO1AQ96HE7 468 aa6.57□□□□□ -1.36
HMGB4-202ENST00000458277 TSPY26PQ9H489 355 aa6.57□□□□□ -1.36
HMGB4-202ENST00000458277 ETAA1Q9NY74 926 aa6.57□□□□□ -1.36
HMGB4-202ENST00000458277 CPSF2Q9P2I0 782 aaKnown RBP6.57□□□□□ -1.36
HMGB4-202ENST00000458277 NAGPAQ9UK23 515 aa6.57□□□□□ -1.36
HMGB4-202ENST00000458277 RRP15Q9Y3B9 282 aaKnown RBP6.57□□□□□ -1.36
HMGB4-202ENST00000458277 NDUFB9Q9Y6M9 179 aa6.57□□□□□ -1.36
HMGB4-202ENST00000458277 IPO8O15397 1037 aaKnown RBP6.56□□□□□ -1.36
HMGB4-202ENST00000458277 RPS6KA5O75582 802 aa6.56□□□□□ -1.36
HMGB4-202ENST00000458277 ALX3O95076 343 aa6.56□□□□□ -1.36
HMGB4-202ENST00000458277 PRPHP41219 470 aa6.56□□□□□ -1.36
HMGB4-202ENST00000458277 CRYMQ14894 314 aa6.56□□□□□ -1.36
HMGB4-202ENST00000458277 PPP2R5AQ15172 486 aa6.56□□□□□ -1.36
HMGB4-202ENST00000458277 IGF2-ASQ6U949 168 aa6.56□□□□□ -1.36
HMGB4-202ENST00000458277 KRBA2Q6ZNG9 492 aa6.56□□□□□ -1.36
HMGB4-202ENST00000458277 KIAA1328Q86T90 577 aa6.56□□□□□ -1.36
HMGB4-202ENST00000458277 CHMP7Q8WUX9 453 aaPredicted RBP6.56□□□□□ -1.36
HMGB4-202ENST00000458277 RBSNQ9H1K0 784 aa6.56□□□□□ -1.36
HMGB4-202ENST00000458277 SPATS2LQ9NUQ6 558 aaKnown RBP6.56□□□□□ -1.36
HMGB4-202ENST00000458277 POLKQ9UBT6 870 aa6.56□□□□□ -1.36
HMGB4-202ENST00000458277 ZNF232Q9UNY5 417 aa6.56□□□□□ -1.36
HMGB4-202ENST00000458277 KCNH4Q9UQ05 1017 aa6.56□□□□□ -1.36
HMGB4-202ENST00000458277 CEP170Q5SW79 1584 aa6.56□□□□□ -1.36
HMGB4-202ENST00000458277 KIAA0586Q9BVV6 1533 aa6.55□□□□□ -1.36
HMGB4-202ENST00000458277 ELP1O95163 1332 aa6.55□□□□□ -1.36
HMGB4-202ENST00000458277 SHROOM2Q13796 1616 aa6.55□□□□□ -1.36
HMGB4-202ENST00000458277 A0A1B0GUA9 196 aa6.55□□□□□ -1.36
HMGB4-202ENST00000458277 PPFIA2O75334 1257 aa6.55□□□□□ -1.36
HMGB4-202ENST00000458277 NOS2P35228 1153 aa6.55□□□□□ -1.36
HMGB4-202ENST00000458277 EIF5P55010 431 aaKnown RBP6.55□□□□□ -1.36
HMGB4-202ENST00000458277 TMED1Q13445 227 aa6.55□□□□□ -1.36
HMGB4-202ENST00000458277 NEDD9Q14511 834 aa6.55□□□□□ -1.36
HMGB4-202ENST00000458277 MCM6Q14566 821 aa6.55□□□□□ -1.36
HMGB4-202ENST00000458277 MAP9Q49MG5 647 aa6.55□□□□□ -1.36
HMGB4-202ENST00000458277 FILIP1LQ4L180 1135 aa6.55□□□□□ -1.36
HMGB4-202ENST00000458277 SYT10Q6XYQ8 523 aa6.55□□□□□ -1.36
HMGB4-202ENST00000458277 EP400NLQ6ZTU2 488 aa6.55□□□□□ -1.36
HMGB4-202ENST00000458277 ANKRD18AQ8IVF6 992 aa6.55□□□□□ -1.36
HMGB4-202ENST00000458277 DZIP1LQ8IYY4 767 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms