RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 BMP2KLQ5H9B9 411 aa10.48□□□□□ -0.73
CLTCL1-204ENST00000458188 APOBEC3HQ6NTF7 200 aaKnown RBP10.48□□□□□ -0.73
CLTCL1-204ENST00000458188 CHADLQ6NUI6 762 aa10.48□□□□□ -0.73
CLTCL1-204ENST00000458188 CWC27Q6UX04 472 aaKnown RBP10.48□□□□□ -0.73
CLTCL1-204ENST00000458188 DLK2Q6UY11 383 aa10.48□□□□□ -0.73
CLTCL1-204ENST00000458188 SH3RF3Q8TEJ3 882 aaPredicted RBP10.48□□□□□ -0.73
CLTCL1-204ENST00000458188 OSBP2Q969R2 916 aa10.48□□□□□ -0.73
CLTCL1-204ENST00000458188 L3MBTL3Q96JM7 780 aaPredicted RBP10.48□□□□□ -0.73
CLTCL1-204ENST00000458188 TAF1DQ9H5J8 278 aaPredicted RBP10.48□□□□□ -0.73
CLTCL1-204ENST00000458188 ARMT1Q9H993 441 aa10.48□□□□□ -0.73
CLTCL1-204ENST00000458188 SERPINA10Q9UK55 444 aa10.48□□□□□ -0.73
CLTCL1-204ENST00000458188 CLEC11AQ9Y240 323 aa10.48□□□□□ -0.73
CLTCL1-204ENST00000458188 SUGT1Q9Y2Z0 365 aa10.48□□□□□ -0.73
CLTCL1-204ENST00000458188 CCDC88AQ3V6T2 1871 aa10.47□□□□□ -0.73
CLTCL1-204ENST00000458188 A0A0D9SFI3 127 aa10.47□□□□□ -0.73
CLTCL1-204ENST00000458188 MAGEB6P1A0A0J9YX57 407 aa10.47□□□□□ -0.73
CLTCL1-204ENST00000458188 SPDYE2BA6NHP3 402 aa10.47□□□□□ -0.73
CLTCL1-204ENST00000458188 WNT10BO00744 389 aa10.47□□□□□ -0.73
CLTCL1-204ENST00000458188 PRKAB2O43741 272 aa10.47□□□□□ -0.73
CLTCL1-204ENST00000458188 MBD4O95243 580 aa10.47□□□□□ -0.73
CLTCL1-204ENST00000458188 LDHCP07864 332 aa10.47□□□□□ -0.73
CLTCL1-204ENST00000458188 SPDYE6P0CI01 402 aa10.47□□□□□ -0.73
CLTCL1-204ENST00000458188 CHMLP26374 656 aa10.47□□□□□ -0.73
CLTCL1-204ENST00000458188 UBE3CQ15386 1083 aa10.47□□□□□ -0.73
CLTCL1-204ENST00000458188 ZSCAN25Q6NSZ9 544 aa10.47□□□□□ -0.73
CLTCL1-204ENST00000458188 CDC42EP5Q6NZY7 148 aa10.47□□□□□ -0.73
CLTCL1-204ENST00000458188 HHIPL2Q6UWX4 724 aa10.47□□□□□ -0.73
CLTCL1-204ENST00000458188 LCORLQ8N3X6 602 aa10.47□□□□□ -0.73
CLTCL1-204ENST00000458188 ZDHHC15Q96MV8 337 aa10.47□□□□□ -0.73
CLTCL1-204ENST00000458188 IL25Q9H293 177 aa10.47□□□□□ -0.73
CLTCL1-204ENST00000458188 VEZTQ9HBM0 779 aa10.47□□□□□ -0.73
CLTCL1-204ENST00000458188 ADARB2Q9NS39 739 aaKnown RBP10.47□□□□□ -0.73
CLTCL1-204ENST00000458188 MROH7-TTC4A0A0A0MT08 1334 aa10.47□□□□□ -0.73
CLTCL1-204ENST00000458188 GPR75-ASB3A0A0A6YYF3 556 aa10.46□□□□□ -0.73
CLTCL1-204ENST00000458188 TCP10L2B9ZVM9 353 aa10.46□□□□□ -0.73
CLTCL1-204ENST00000458188 RGS19P49795 217 aa10.46□□□□□ -0.73
CLTCL1-204ENST00000458188 PICALMQ13492 652 aa10.46□□□□□ -0.73
CLTCL1-204ENST00000458188 SLC4A8Q2Y0W8 1093 aa10.46□□□□□ -0.73
CLTCL1-204ENST00000458188 ZMYM1Q5SVZ6 1142 aa10.46□□□□□ -0.73
CLTCL1-204ENST00000458188 ANGEL2Q5VTE6 544 aaKnown RBP10.46□□□□□ -0.73
CLTCL1-204ENST00000458188 PRAMEF18Q5VWM3 479 aa10.46□□□□□ -0.73
CLTCL1-204ENST00000458188 SLF2Q8IX21 1173 aa10.46□□□□□ -0.73
CLTCL1-204ENST00000458188 FAM163AQ96GL9 167 aaPredicted RBP10.46□□□□□ -0.73
CLTCL1-204ENST00000458188 NOL10Q9BSC4 688 aaKnown RBP10.46□□□□□ -0.73
CLTCL1-204ENST00000458188 DIAPH3Q9NSV4 1193 aa10.46□□□□□ -0.73
CLTCL1-204ENST00000458188 WBP1LQ9NX94 342 aa10.46□□□□□ -0.73
CLTCL1-204ENST00000458188 ZNF70Q9UC06 446 aaPredicted RBP10.46□□□□□ -0.73
CLTCL1-204ENST00000458188 MAST3O60307 1309 aa10.46□□□□□ -0.73
CLTCL1-204ENST00000458188 CNTNAP1P78357 1384 aa10.46□□□□□ -0.74
CLTCL1-204ENST00000458188 GAKO14976 1311 aa10.45□□□□□ -0.74
CLTCL1-204ENST00000458188 IQCA1LA6NCM1 817 aa10.45□□□□□ -0.74
CLTCL1-204ENST00000458188 BAG3O95817 575 aa10.45□□□□□ -0.74
CLTCL1-204ENST00000458188 ZFYP08048 801 aaPredicted RBP10.45□□□□□ -0.74
CLTCL1-204ENST00000458188 RHBDL3P58872 404 aa10.45□□□□□ -0.74
CLTCL1-204ENST00000458188 HDLBPQ00341 1268 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-204ENST00000458188 TCP10Q12799 353 aa10.45□□□□□ -0.74
CLTCL1-204ENST00000458188 NFIAQ12857 509 aa10.45□□□□□ -0.74
CLTCL1-204ENST00000458188 ZNF589Q86UQ0 364 aaPredicted RBP10.45□□□□□ -0.74
CLTCL1-204ENST00000458188 ZFPM1Q8IX07 1006 aa10.45□□□□□ -0.74
CLTCL1-204ENST00000458188 TEX11Q8IYF3 940 aa10.45□□□□□ -0.74
CLTCL1-204ENST00000458188 TGFBRAP1Q8WUH2 860 aa10.45□□□□□ -0.74
CLTCL1-204ENST00000458188 SDR42E1Q8WUS8 393 aa10.45□□□□□ -0.74
CLTCL1-204ENST00000458188 APPBP2Q92624 585 aa10.45□□□□□ -0.74
CLTCL1-204ENST00000458188 ZBED3Q96IU2 234 aaPredicted RBP10.45□□□□□ -0.74
CLTCL1-204ENST00000458188 RIOK1Q9BRS2 568 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-204ENST00000458188 MRIQ9BWK5 157 aa10.45□□□□□ -0.74
CLTCL1-204ENST00000458188 SLC4A4Q9Y6R1 1079 aa10.45□□□□□ -0.74
CLTCL1-204ENST00000458188 TIAM2Q8IVF5 1701 aa10.44□□□□□ -0.74
CLTCL1-204ENST00000458188 GPAA1O43292 621 aa10.44□□□□□ -0.74
CLTCL1-204ENST00000458188 CDC45O75419 566 aa10.44□□□□□ -0.74
CLTCL1-204ENST00000458188 APPP05067 770 aa10.44□□□□□ -0.74
CLTCL1-204ENST00000458188 VEGFBP49765 207 aa10.44□□□□□ -0.74
CLTCL1-204ENST00000458188 PPP4CP60510 307 aa10.44□□□□□ -0.74
CLTCL1-204ENST00000458188 MAP2K1Q02750 393 aaPredicted RBP10.44□□□□□ -0.74
CLTCL1-204ENST00000458188 LRRFIP1Q32MZ4 808 aaKnown RBP10.44□□□□□ -0.74
CLTCL1-204ENST00000458188 MCMDC2Q4G0Z9 681 aa10.44□□□□□ -0.74
CLTCL1-204ENST00000458188 VPS53Q5VIR6 699 aa10.44□□□□□ -0.74
CLTCL1-204ENST00000458188 MAP1SQ66K74 1059 aaPredicted RBP10.44□□□□□ -0.74
CLTCL1-204ENST00000458188 USP50Q70EL3 339 aaPredicted RBP10.44□□□□□ -0.74
CLTCL1-204ENST00000458188 USP48Q86UV5 1035 aa10.44□□□□□ -0.74
CLTCL1-204ENST00000458188 MAPKAPK5Q8IW41 473 aa10.44□□□□□ -0.74
CLTCL1-204ENST00000458188 MTMR14Q8NCE2 650 aa10.44□□□□□ -0.74
CLTCL1-204ENST00000458188 STRBPQ96SI9 672 aaKnown RBP10.44□□□□□ -0.74
CLTCL1-204ENST00000458188 DDX4Q9NQI0 724 aaKnown RBP10.44□□□□□ -0.74
CLTCL1-204ENST00000458188 GGA3Q9NZ52 723 aa10.44□□□□□ -0.74
CLTCL1-204ENST00000458188 SAP30BPQ9UHR5 308 aaKnown RBP10.44□□□□□ -0.74
CLTCL1-204ENST00000458188 AKAP11Q9UKA4 1901 aa10.43□□□□□ -0.74
CLTCL1-204ENST00000458188 TMEM88BA6NKF7 163 aa10.43□□□□□ -0.74
CLTCL1-204ENST00000458188 ADM5C9JUS6 153 aa10.43□□□□□ -0.74
CLTCL1-204ENST00000458188 MYO1BO43795 1136 aa10.43□□□□□ -0.74
CLTCL1-204ENST00000458188 WDHD1O75717 1129 aaPredicted RBP10.43□□□□□ -0.74
CLTCL1-204ENST00000458188 SLURP2P0DP57 97 aa10.43□□□□□ -0.74
CLTCL1-204ENST00000458188 USP5P45974 858 aa10.43□□□□□ -0.74
CLTCL1-204ENST00000458188 EVX2Q03828 476 aa10.43□□□□□ -0.74
CLTCL1-204ENST00000458188 FMR1Q06787 632 aaKnown RBP eCLIP10.43□□□□□ -0.74
CLTCL1-204ENST00000458188 SPDYE2Q495Y8 402 aa10.43□□□□□ -0.74
CLTCL1-204ENST00000458188 CDAN1Q8IWY9 1227 aa10.43□□□□□ -0.74
CLTCL1-204ENST00000458188 STK11IPQ8N1F8 1099 aa10.43□□□□□ -0.74
CLTCL1-204ENST00000458188 HELLSQ9NRZ9 838 aa10.43□□□□□ -0.74
CLTCL1-204ENST00000458188 FAM198AQ9UFP1 575 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms