RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 CEP290O15078 2479 aa19.59■□□□□ 0.73
CHCHD3-204ENST00000457942 HDLBPQ00341 1268 aaKnown RBP19.59■□□□□ 0.73
CHCHD3-204ENST00000457942 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.59■□□□□ 0.73
CHCHD3-204ENST00000457942 ATG9AQ7Z3C6 839 aa19.59■□□□□ 0.73
CHCHD3-204ENST00000457942 TRIOBPQ9H2D6 2365 aa19.59■□□□□ 0.73
CHCHD3-204ENST00000457942 UNCXA6NJT0 531 aa19.58■□□□□ 0.72
CHCHD3-204ENST00000457942 CIAO1O76071 339 aa19.58■□□□□ 0.72
CHCHD3-204ENST00000457942 DIEXFQ68CQ4 756 aaKnown RBP19.58■□□□□ 0.72
CHCHD3-204ENST00000457942 FRAT1Q92837 279 aaPredicted RBP19.58■□□□□ 0.72
CHCHD3-204ENST00000457942 GNL3LQ9NVN8 582 aaKnown RBP19.58■□□□□ 0.72
CHCHD3-204ENST00000457942 FBXO3Q9UK99 471 aa19.58■□□□□ 0.72
CHCHD3-204ENST00000457942 PA2G4Q9UQ80 394 aaKnown RBP19.58■□□□□ 0.72
CHCHD3-204ENST00000457942 IPO8O15397 1037 aaKnown RBP19.57■□□□□ 0.72
CHCHD3-204ENST00000457942 GNAI3P08754 354 aa19.57■□□□□ 0.72
CHCHD3-204ENST00000457942 IL15P40933 162 aaPredicted RBP19.57■□□□□ 0.72
CHCHD3-204ENST00000457942 GTF2A2P52657 109 aa19.57■□□□□ 0.72
CHCHD3-204ENST00000457942 CACNB3P54284 484 aa19.57■□□□□ 0.72
CHCHD3-204ENST00000457942 WDR66Q8TBY9 1149 aa19.57■□□□□ 0.72
CHCHD3-204ENST00000457942 SUGT1Q9Y2Z0 365 aa19.57■□□□□ 0.72
CHCHD3-204ENST00000457942 CSADQ9Y600 493 aa19.57■□□□□ 0.72
CHCHD3-204ENST00000457942 ARHGAP45Q92619 1136 aa19.56■□□□□ 0.72
CHCHD3-204ENST00000457942 TEPSINQ96N21 525 aa19.56■□□□□ 0.72
CHCHD3-204ENST00000457942 RANBP2P49792 3224 aaKnown RBP19.56■□□□□ 0.72
CHCHD3-204ENST00000457942 ARHGEF6Q15052 776 aa19.55■□□□□ 0.72
CHCHD3-204ENST00000457942 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.55■□□□□ 0.72
CHCHD3-204ENST00000457942 ZDHHC15Q96MV8 337 aa19.55■□□□□ 0.72
CHCHD3-204ENST00000457942 SRGAP3O43295 1099 aa19.54■□□□□ 0.72
CHCHD3-204ENST00000457942 MAP3K9P80192 1104 aa19.54■□□□□ 0.72
CHCHD3-204ENST00000457942 HNRNPUQ00839 825 aaKnown RBP eCLIP19.54■□□□□ 0.72
CHCHD3-204ENST00000457942 KIF22Q14807 665 aa19.54■□□□□ 0.72
CHCHD3-204ENST00000457942 AK9Q5TCS8 1911 aa19.54■□□□□ 0.72
CHCHD3-204ENST00000457942 TRIM27P14373 513 aa19.53■□□□□ 0.72
CHCHD3-204ENST00000457942 LACTBP83111 547 aaPredicted RBP19.53■□□□□ 0.72
CHCHD3-204ENST00000457942 MTFR1Q15390 333 aa19.53■□□□□ 0.72
CHCHD3-204ENST00000457942 DPF3Q92784 378 aa19.53■□□□□ 0.72
CHCHD3-204ENST00000457942 CLUAP1Q96AJ1 413 aa19.53■□□□□ 0.72
CHCHD3-204ENST00000457942 SHISA4Q96DD7 197 aa19.53■□□□□ 0.72
CHCHD3-204ENST00000457942 COPRSQ9NQ92 184 aa19.53■□□□□ 0.72
CHCHD3-204ENST00000457942 SNCAIPQ9Y6H5 919 aa19.53■□□□□ 0.72
CHCHD3-204ENST00000457942 BTBD19C9JJ37 291 aa19.52■□□□□ 0.72
CHCHD3-204ENST00000457942 BCAR3O75815 825 aa19.52■□□□□ 0.72
CHCHD3-204ENST00000457942 LDHBP07195 334 aaKnown RBP19.52■□□□□ 0.72
CHCHD3-204ENST00000457942 PHKA1P46020 1223 aa19.52■□□□□ 0.72
CHCHD3-204ENST00000457942 APOBEC3HQ6NTF7 200 aaKnown RBP19.52■□□□□ 0.72
CHCHD3-204ENST00000457942 HHIPL2Q6UWX4 724 aa19.52■□□□□ 0.72
CHCHD3-204ENST00000457942 ATF7IPQ6VMQ6 1270 aa19.52■□□□□ 0.72
CHCHD3-204ENST00000457942 ZKSCAN4Q969J2 545 aaPredicted RBP19.52■□□□□ 0.72
CHCHD3-204ENST00000457942 WRNIP1Q96S55 665 aa19.52■□□□□ 0.72
CHCHD3-204ENST00000457942 RBM27Q9P2N5 1060 aaKnown RBP19.52■□□□□ 0.72
CHCHD3-204ENST00000457942 DENND2AQ9ULE3 1009 aa19.52■□□□□ 0.72
CHCHD3-204ENST00000457942 SPDYE5A6NIY4 337 aa19.51■□□□□ 0.71
CHCHD3-204ENST00000457942 ADORA1P30542 326 aa19.51■□□□□ 0.71
CHCHD3-204ENST00000457942 DIXDC1Q155Q3 683 aa19.51■□□□□ 0.71
CHCHD3-204ENST00000457942 MIER1Q8N108 512 aa19.51■□□□□ 0.71
CHCHD3-204ENST00000457942 HOOK2Q96ED9 719 aa19.51■□□□□ 0.71
CHCHD3-204ENST00000457942 MRIQ9BWK5 157 aa19.51■□□□□ 0.71
CHCHD3-204ENST00000457942 CPA4Q9UI42 421 aa19.51■□□□□ 0.71
CHCHD3-204ENST00000457942 SEMA3EO15041 775 aa19.5■□□□□ 0.71
CHCHD3-204ENST00000457942 TLR2O60603 784 aa19.5■□□□□ 0.71
CHCHD3-204ENST00000457942 WDHD1O75717 1129 aaPredicted RBP19.5■□□□□ 0.71
CHCHD3-204ENST00000457942 GNAI2P04899 355 aa19.5■□□□□ 0.71
CHCHD3-204ENST00000457942 CETPP11597 493 aa19.5■□□□□ 0.71
CHCHD3-204ENST00000457942 PRDX5P30044 214 aa19.5■□□□□ 0.71
CHCHD3-204ENST00000457942 FAM83AQ86UY5 434 aa19.5■□□□□ 0.71
CHCHD3-204ENST00000457942 TNNQ9UQP3 1299 aa19.5■□□□□ 0.71
CHCHD3-204ENST00000457942 DAGLAQ9Y4D2 1042 aa19.5■□□□□ 0.71
CHCHD3-204ENST00000457942 IRF6O14896 467 aa19.49■□□□□ 0.71
CHCHD3-204ENST00000457942 CTGFP29279 349 aa19.49■□□□□ 0.71
CHCHD3-204ENST00000457942 FKBP1CQ5VVH2 108 aa19.49■□□□□ 0.71
CHCHD3-204ENST00000457942 DCAF15Q66K64 600 aa19.49■□□□□ 0.71
CHCHD3-204ENST00000457942 CCDC102BQ68D86 513 aa19.49■□□□□ 0.71
CHCHD3-204ENST00000457942 ZGPATQ8N5A5 531 aaKnown RBP19.49■□□□□ 0.71
CHCHD3-204ENST00000457942 AKAP2Q9Y2D5 859 aa19.49■□□□□ 0.71
CHCHD3-204ENST00000457942 MYH2Q9UKX2 1941 aa19.49■□□□□ 0.71
CHCHD3-204ENST00000457942 RPAP1Q9BWH6 1393 aaPredicted RBP19.48■□□□□ 0.71
CHCHD3-204ENST00000457942 TFCP2Q12800 502 aa19.48■□□□□ 0.71
CHCHD3-204ENST00000457942 SNAPC2Q13487 334 aa19.48■□□□□ 0.71
CHCHD3-204ENST00000457942 ZKSCAN2Q63HK3 967 aa19.48■□□□□ 0.71
CHCHD3-204ENST00000457942 DZIP1Q86YF9 867 aaKnown RBP19.48■□□□□ 0.71
CHCHD3-204ENST00000457942 A0A1B0GUL7 405 aa19.47■□□□□ 0.71
CHCHD3-204ENST00000457942 TIMM10P62072 90 aa19.47■□□□□ 0.71
CHCHD3-204ENST00000457942 TCP10Q12799 353 aa19.47■□□□□ 0.71
CHCHD3-204ENST00000457942 GORABQ5T7V8 394 aa19.47■□□□□ 0.71
CHCHD3-204ENST00000457942 ERO1BQ86YB8 467 aa19.47■□□□□ 0.71
CHCHD3-204ENST00000457942 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.47■□□□□ 0.71
CHCHD3-204ENST00000457942 TRIM47Q96LD4 638 aa19.47■□□□□ 0.71
CHCHD3-204ENST00000457942 NEUROD6Q96NK8 337 aa19.47■□□□□ 0.71
CHCHD3-204ENST00000457942 ABCF2Q9UG63 623 aa19.47■□□□□ 0.71
CHCHD3-204ENST00000457942 SALL1Q9NSC2 1324 aa19.47■□□□□ 0.71
CHCHD3-204ENST00000457942 PSMC4P43686 418 aa19.46■□□□□ 0.71
CHCHD3-204ENST00000457942 MTX1Q13505 466 aa19.46■□□□□ 0.71
CHCHD3-204ENST00000457942 MVPQ14764 893 aaKnown RBP19.46■□□□□ 0.71
CHCHD3-204ENST00000457942 CDC42EP5Q6NZY7 148 aa19.46■□□□□ 0.71
CHCHD3-204ENST00000457942 FTSJ3Q8IY81 847 aaKnown RBP19.46■□□□□ 0.71
CHCHD3-204ENST00000457942 TMEM57Q8N5G2 664 aa19.46■□□□□ 0.71
CHCHD3-204ENST00000457942 RAET1EQ8TD07 263 aa19.46■□□□□ 0.71
CHCHD3-204ENST00000457942 XAGE2Q96GT9 111 aa19.46■□□□□ 0.71
CHCHD3-204ENST00000457942 USP40Q9NVE5 1235 aa19.46■□□□□ 0.71
CHCHD3-204ENST00000457942 BIN2Q9UBW5 565 aaPredicted RBP19.46■□□□□ 0.71
CHCHD3-204ENST00000457942 FMNL1O95466 1100 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms