RNA–Protein interactions for RNA: ENST00000457096.1

CROCCP4-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

BASIC

Gene CROCCP4, Length 498 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-201ENST00000457096 FBXO3Q9UK99 471 aa18.98■□□□□ 0.63
CROCCP4-201ENST00000457096 TRIM17Q9Y577 477 aa18.98■□□□□ 0.63
CROCCP4-201ENST00000457096 LAMB1P07942 1786 aa18.97■□□□□ 0.63
CROCCP4-201ENST00000457096 PNMA6EA0A0J9YXQ4 647 aa18.97■□□□□ 0.63
CROCCP4-201ENST00000457096 INPP5BP32019 993 aa18.97■□□□□ 0.63
CROCCP4-201ENST00000457096 RASGRF1Q13972 1273 aa18.97■□□□□ 0.63
CROCCP4-201ENST00000457096 FBXO46Q6PJ61 603 aaPredicted RBP18.97■□□□□ 0.63
CROCCP4-201ENST00000457096 ATF7IPQ6VMQ6 1270 aa18.97■□□□□ 0.63
CROCCP4-201ENST00000457096 FAM83AQ86UY5 434 aa18.97■□□□□ 0.63
CROCCP4-201ENST00000457096 FAM43AQ8N2R8 423 aa18.97■□□□□ 0.63
CROCCP4-201ENST00000457096 GNL3LQ9NVN8 582 aaKnown RBP18.97■□□□□ 0.63
CROCCP4-201ENST00000457096 FAM198AQ9UFP1 575 aa18.97■□□□□ 0.63
CROCCP4-201ENST00000457096 CSADQ9Y600 493 aa18.97■□□□□ 0.63
CROCCP4-201ENST00000457096 A0A1B0GUL7 405 aa18.96■□□□□ 0.63
CROCCP4-201ENST00000457096 GNAI3P08754 354 aa18.96■□□□□ 0.63
CROCCP4-201ENST00000457096 HNRNPUQ00839 825 aaKnown RBP eCLIP18.96■□□□□ 0.63
CROCCP4-201ENST00000457096 PKN2Q16513 984 aaKnown RBP18.96■□□□□ 0.63
CROCCP4-201ENST00000457096 OTOP1Q7RTM1 612 aa18.96■□□□□ 0.63
CROCCP4-201ENST00000457096 TMEM57Q8N5G2 664 aa18.96■□□□□ 0.63
CROCCP4-201ENST00000457096 XAGE2Q96GT9 111 aa18.96■□□□□ 0.63
CROCCP4-201ENST00000457096 USP40Q9NVE5 1235 aa18.96■□□□□ 0.63
CROCCP4-201ENST00000457096 DENND2AQ9ULE3 1009 aa18.96■□□□□ 0.63
CROCCP4-201ENST00000457096 HTTP42858 3142 aa18.95■□□□□ 0.62
CROCCP4-201ENST00000457096 SPDYE5A6NIY4 337 aa18.95■□□□□ 0.62
CROCCP4-201ENST00000457096 ECM2O94769 699 aaPredicted RBP18.95■□□□□ 0.62
CROCCP4-201ENST00000457096 FKBP1CQ5VVH2 108 aa18.95■□□□□ 0.62
CROCCP4-201ENST00000457096 PI16Q6UXB8 463 aa18.95■□□□□ 0.62
CROCCP4-201ENST00000457096 ABCF2Q9UG63 623 aa18.95■□□□□ 0.62
CROCCP4-201ENST00000457096 MTX1Q13505 466 aa18.94■□□□□ 0.62
CROCCP4-201ENST00000457096 FAM151AQ8WW52 585 aa18.94■□□□□ 0.62
CROCCP4-201ENST00000457096 NEUROD6Q96NK8 337 aa18.94■□□□□ 0.62
CROCCP4-201ENST00000457096 C1orf115Q9H7X2 142 aa18.94■□□□□ 0.62
CROCCP4-201ENST00000457096 SALL1Q9NSC2 1324 aa18.94■□□□□ 0.62
CROCCP4-201ENST00000457096 IRF6O14896 467 aa18.93■□□□□ 0.62
CROCCP4-201ENST00000457096 GNAI2P04899 355 aa18.93■□□□□ 0.62
CROCCP4-201ENST00000457096 GTF2A2P52657 109 aa18.93■□□□□ 0.62
CROCCP4-201ENST00000457096 TAF1CQ15572 869 aaPredicted RBP18.93■□□□□ 0.62
CROCCP4-201ENST00000457096 OTUD7BQ6GQQ9 843 aa18.93■□□□□ 0.62
CROCCP4-201ENST00000457096 HDAC5Q9UQL6 1122 aa18.93■□□□□ 0.62
CROCCP4-201ENST00000457096 RPAP1Q9BWH6 1393 aaPredicted RBP18.93■□□□□ 0.62
CROCCP4-201ENST00000457096 IPO8O15397 1037 aaKnown RBP18.92■□□□□ 0.62
CROCCP4-201ENST00000457096 SP3Q02447 781 aa18.92■□□□□ 0.62
CROCCP4-201ENST00000457096 TBC1D9Q6ZT07 1266 aa18.92■□□□□ 0.62
CROCCP4-201ENST00000457096 ERO1BQ86YB8 467 aa18.92■□□□□ 0.62
CROCCP4-201ENST00000457096 ZNF384Q8TF68 577 aa18.92■□□□□ 0.62
CROCCP4-201ENST00000457096 ZNF341Q9BYN7 854 aa18.92■□□□□ 0.62
CROCCP4-201ENST00000457096 BTBD19C9JJ37 291 aa18.91■□□□□ 0.62
CROCCP4-201ENST00000457096 SEMA3EO15041 775 aa18.91■□□□□ 0.62
CROCCP4-201ENST00000457096 RGS3P49796 1198 aa18.91■□□□□ 0.62
CROCCP4-201ENST00000457096 DCAF15Q66K64 600 aa18.91■□□□□ 0.62
CROCCP4-201ENST00000457096 SH3BP5LQ7L8J4 393 aa18.91■□□□□ 0.62
CROCCP4-201ENST00000457096 DZIP1Q86YF9 867 aaKnown RBP18.91■□□□□ 0.62
CROCCP4-201ENST00000457096 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.91■□□□□ 0.62
CROCCP4-201ENST00000457096 DDX4Q9NQI0 724 aaKnown RBP18.91■□□□□ 0.62
CROCCP4-201ENST00000457096 RLBP1P12271 317 aa18.9■□□□□ 0.62
CROCCP4-201ENST00000457096 DIEXFQ68CQ4 756 aaKnown RBP18.9■□□□□ 0.62
CROCCP4-201ENST00000457096 ERO1AQ96HE7 468 aa18.9■□□□□ 0.62
CROCCP4-201ENST00000457096 ARHGAP39Q9C0H5 1083 aa18.9■□□□□ 0.62
CROCCP4-201ENST00000457096 HMG20BQ9P0W2 317 aa18.9■□□□□ 0.62
CROCCP4-201ENST00000457096 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.9■□□□□ 0.62
CROCCP4-201ENST00000457096 PTPN22Q9Y2R2 807 aa18.9■□□□□ 0.62
CROCCP4-201ENST00000457096 GAKO14976 1311 aa18.9■□□□□ 0.62
CROCCP4-201ENST00000457096 ZSWIM8A7E2V4 1837 aa18.9■□□□□ 0.62
CROCCP4-201ENST00000457096 POTEFA5A3E0 1075 aa18.89■□□□□ 0.61
CROCCP4-201ENST00000457096 BTDP43251 543 aa18.89■□□□□ 0.61
CROCCP4-201ENST00000457096 MECOMQ03112 1051 aa18.89■□□□□ 0.61
CROCCP4-201ENST00000457096 PPIL2Q13356 520 aa18.89■□□□□ 0.61
CROCCP4-201ENST00000457096 PICALMQ13492 652 aa18.89■□□□□ 0.61
CROCCP4-201ENST00000457096 ZKSCAN2Q63HK3 967 aa18.89■□□□□ 0.61
CROCCP4-201ENST00000457096 EFCC1Q9HA90 598 aa18.89■□□□□ 0.61
CROCCP4-201ENST00000457096 ZFYVE28Q9HCC9 887 aa18.89■□□□□ 0.61
CROCCP4-201ENST00000457096 ZNF112Q9UJU3 913 aa18.89■□□□□ 0.61
CROCCP4-201ENST00000457096 AKAP2Q9Y2D5 859 aa18.89■□□□□ 0.61
CROCCP4-201ENST00000457096 ATRNL1Q5VV63 1379 aa18.89■□□□□ 0.61
CROCCP4-201ENST00000457096 DDTLA6NHG4 134 aaPredicted RBP18.88■□□□□ 0.61
CROCCP4-201ENST00000457096 CETPP11597 493 aa18.88■□□□□ 0.61
CROCCP4-201ENST00000457096 SNAPC2Q13487 334 aa18.88■□□□□ 0.61
CROCCP4-201ENST00000457096 MVPQ14764 893 aaKnown RBP18.88■□□□□ 0.61
CROCCP4-201ENST00000457096 RFX7Q2KHR2 1363 aa18.88■□□□□ 0.61
CROCCP4-201ENST00000457096 MYH2Q9UKX2 1941 aa18.88■□□□□ 0.61
CROCCP4-201ENST00000457096 WDHD1O75717 1129 aaPredicted RBP18.87■□□□□ 0.61
CROCCP4-201ENST00000457096 G3BP1Q13283 466 aaKnown RBP eCLIP18.87■□□□□ 0.61
CROCCP4-201ENST00000457096 GORABQ5T7V8 394 aa18.87■□□□□ 0.61
CROCCP4-201ENST00000457096 CCDC84Q86UT8 332 aaPredicted RBP18.87■□□□□ 0.61
CROCCP4-201ENST00000457096 HOOK2Q96ED9 719 aa18.87■□□□□ 0.61
CROCCP4-201ENST00000457096 SNRKQ9NRH2 765 aa18.87■□□□□ 0.61
CROCCP4-201ENST00000457096 CENPFP49454 3210 aa18.87■□□□□ 0.61
CROCCP4-201ENST00000457096 AK9Q5TCS8 1911 aa18.86■□□□□ 0.61
CROCCP4-201ENST00000457096 MROH7-TTC4A0A0A0MT08 1334 aa18.86■□□□□ 0.61
CROCCP4-201ENST00000457096 FAM196BA6NMK8 535 aa18.86■□□□□ 0.61
CROCCP4-201ENST00000457096 MCAMP43121 646 aa18.86■□□□□ 0.61
CROCCP4-201ENST00000457096 PPATQ06203 517 aa18.86■□□□□ 0.61
CROCCP4-201ENST00000457096 MOGSQ13724 837 aa18.86■□□□□ 0.61
CROCCP4-201ENST00000457096 ERICH6Q7L0X2 663 aa18.86■□□□□ 0.61
CROCCP4-201ENST00000457096 ZSCAN29Q8IWY8 852 aaPredicted RBP18.86■□□□□ 0.61
CROCCP4-201ENST00000457096 ZGPATQ8N5A5 531 aaKnown RBP18.86■□□□□ 0.61
CROCCP4-201ENST00000457096 SPATA5Q8NB90 893 aa18.86■□□□□ 0.61
CROCCP4-201ENST00000457096 IDI2Q9BXS1 227 aa18.86■□□□□ 0.61
CROCCP4-201ENST00000457096 PTCH2Q9Y6C5 1203 aa18.86■□□□□ 0.61
CROCCP4-201ENST00000457096 PDS5AQ29RF7 1337 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms