RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 FAM163AQ96GL9 167 aaPredicted RBP12.27□□□□□ -0.45
ATG4A-206ENST00000457035 ZDHHC15Q96MV8 337 aa12.27□□□□□ -0.45
ATG4A-206ENST00000457035 BOLA2Q9H3K6 86 aa12.27□□□□□ -0.45
ATG4A-206ENST00000457035 ANTXR1Q9H6X2 564 aa12.27□□□□□ -0.45
ATG4A-206ENST00000457035 AOX1Q06278 1338 aa12.27□□□□□ -0.45
ATG4A-206ENST00000457035 SALL3Q9BXA9 1300 aa12.27□□□□□ -0.45
ATG4A-206ENST00000457035 CNTNAP1P78357 1384 aa12.27□□□□□ -0.45
ATG4A-206ENST00000457035 RBM5P52756 815 aaKnown RBP eCLIP12.26□□□□□ -0.45
ATG4A-206ENST00000457035 NUCB1Q02818 461 aa12.26□□□□□ -0.45
ATG4A-206ENST00000457035 MECOMQ03112 1051 aa12.26□□□□□ -0.45
ATG4A-206ENST00000457035 DIXDC1Q155Q3 683 aa12.26□□□□□ -0.45
ATG4A-206ENST00000457035 ANGEL2Q5VTE6 544 aaKnown RBP12.26□□□□□ -0.45
ATG4A-206ENST00000457035 CDC37L1Q7L3B6 337 aa12.26□□□□□ -0.45
ATG4A-206ENST00000457035 TEKT1Q969V4 418 aa12.26□□□□□ -0.45
ATG4A-206ENST00000457035 NSUN4Q96CB9 384 aaKnown RBP12.26□□□□□ -0.45
ATG4A-206ENST00000457035 HAUS7Q99871 368 aa12.26□□□□□ -0.45
ATG4A-206ENST00000457035 PIH1D3Q9NQM4 214 aaKnown RBP12.26□□□□□ -0.45
ATG4A-206ENST00000457035 ECHDC1Q9NTX5 307 aa12.26□□□□□ -0.45
ATG4A-206ENST00000457035 MAST3O60307 1309 aa12.26□□□□□ -0.45
ATG4A-206ENST00000457035 DOCK2Q92608 1830 aa12.25□□□□□ -0.45
ATG4A-206ENST00000457035 TMEM88BA6NKF7 163 aa12.25□□□□□ -0.45
ATG4A-206ENST00000457035 MAP3K13O43283 966 aa12.25□□□□□ -0.45
ATG4A-206ENST00000457035 IGSF3O75054 1194 aa12.25□□□□□ -0.45
ATG4A-206ENST00000457035 FMR1Q06787 632 aaKnown RBP eCLIP12.25□□□□□ -0.45
ATG4A-206ENST00000457035 DLK2Q6UY11 383 aa12.25□□□□□ -0.45
ATG4A-206ENST00000457035 USP48Q86UV5 1035 aa12.25□□□□□ -0.45
ATG4A-206ENST00000457035 CHD1LQ86WJ1 897 aa12.25□□□□□ -0.45
ATG4A-206ENST00000457035 DCPSQ96C86 337 aaKnown RBP12.25□□□□□ -0.45
ATG4A-206ENST00000457035 GLIS2Q9BZE0 524 aaPredicted RBP12.25□□□□□ -0.45
ATG4A-206ENST00000457035 LNPKQ9C0E8 428 aa12.25□□□□□ -0.45
ATG4A-206ENST00000457035 GGA3Q9NZ52 723 aa12.25□□□□□ -0.45
ATG4A-206ENST00000457035 LRP2BPQ9P2M1 347 aa12.25□□□□□ -0.45
ATG4A-206ENST00000457035 DAGLAQ9Y4D2 1042 aa12.25□□□□□ -0.45
ATG4A-206ENST00000457035 PITPNM2Q9BZ72 1349 aa12.25□□□□□ -0.45
ATG4A-206ENST00000457035 GAKO14976 1311 aa12.24□□□□□ -0.45
ATG4A-206ENST00000457035 MYH7P12883 1935 aa12.24□□□□□ -0.45
ATG4A-206ENST00000457035 VEGFBP49765 207 aa12.24□□□□□ -0.45
ATG4A-206ENST00000457035 AK9Q5TCS8 1911 aa12.24□□□□□ -0.45
ATG4A-206ENST00000457035 TSHZ3Q63HK5 1081 aa12.24□□□□□ -0.45
ATG4A-206ENST00000457035 TTC41PQ6P2S7 1318 aa12.24□□□□□ -0.45
ATG4A-206ENST00000457035 KRT26Q7Z3Y9 468 aa12.24□□□□□ -0.45
ATG4A-206ENST00000457035 DZIP1Q86YF9 867 aaKnown RBP12.24□□□□□ -0.45
ATG4A-206ENST00000457035 PI4K2BQ8TCG2 481 aa12.24□□□□□ -0.45
ATG4A-206ENST00000457035 EDC3Q96F86 508 aaKnown RBP12.24□□□□□ -0.45
ATG4A-206ENST00000457035 TDRD3Q9H7E2 651 aaKnown RBP12.24□□□□□ -0.45
ATG4A-206ENST00000457035 RAI14Q9P0K7 980 aa12.24□□□□□ -0.45
ATG4A-206ENST00000457035 ZNF70Q9UC06 446 aaPredicted RBP12.24□□□□□ -0.45
ATG4A-206ENST00000457035 STAP2Q9UGK3 403 aa12.24□□□□□ -0.45
ATG4A-206ENST00000457035 SCAF8Q9UPN6 1271 aaKnown RBP12.24□□□□□ -0.45
ATG4A-206ENST00000457035 GPR75-ASB3A0A0A6YYF3 556 aa12.23□□□□□ -0.45
ATG4A-206ENST00000457035 GOLIM4O00461 696 aa12.23□□□□□ -0.45
ATG4A-206ENST00000457035 TRAF5O00463 557 aa12.23□□□□□ -0.45
ATG4A-206ENST00000457035 FOXN1O15353 648 aa12.23□□□□□ -0.45
ATG4A-206ENST00000457035 MYO1BO43795 1136 aa12.23□□□□□ -0.45
ATG4A-206ENST00000457035 LDHCP07864 332 aa12.23□□□□□ -0.45
ATG4A-206ENST00000457035 MX1P20591 662 aa12.23□□□□□ -0.45
ATG4A-206ENST00000457035 PDE1AP54750 535 aa12.23□□□□□ -0.45
ATG4A-206ENST00000457035 TTF1Q15361 905 aaPredicted RBP12.23□□□□□ -0.45
ATG4A-206ENST00000457035 SLF2Q8IX21 1173 aa12.23□□□□□ -0.45
ATG4A-206ENST00000457035 SPOCK2Q92563 424 aa12.23□□□□□ -0.45
ATG4A-206ENST00000457035 DNAJC2Q99543 621 aaKnown RBP12.23□□□□□ -0.45
ATG4A-206ENST00000457035 PAG1Q9NWQ8 432 aa12.23□□□□□ -0.45
ATG4A-206ENST00000457035 CLRN2A0PK11 232 aa12.22□□□□□ -0.45
ATG4A-206ENST00000457035 ADM5C9JUS6 153 aa12.22□□□□□ -0.45
ATG4A-206ENST00000457035 NEFLP07196 543 aa12.22□□□□□ -0.45
ATG4A-206ENST00000457035 GSTO1P78417 241 aa12.22□□□□□ -0.45
ATG4A-206ENST00000457035 CST9Q5W186 159 aa12.22□□□□□ -0.45
ATG4A-206ENST00000457035 NAA16Q6N069 864 aaPredicted RBP12.22□□□□□ -0.45
ATG4A-206ENST00000457035 CDC42EP5Q6NZY7 148 aa12.22□□□□□ -0.45
ATG4A-206ENST00000457035 PLEKHM2Q8IWE5 1019 aa12.22□□□□□ -0.45
ATG4A-206ENST00000457035 SULF1Q8IWU6 871 aa12.22□□□□□ -0.45
ATG4A-206ENST00000457035 AIDAQ96BJ3 306 aa12.22□□□□□ -0.45
ATG4A-206ENST00000457035 GPATCH3Q96I76 525 aa12.22□□□□□ -0.45
ATG4A-206ENST00000457035 ABT1Q9ULW3 272 aaKnown RBP12.22□□□□□ -0.45
ATG4A-206ENST00000457035 MROH7-TTC4A0A0A0MT08 1334 aa12.21□□□□□ -0.45
ATG4A-206ENST00000457035 ERC2O15083 957 aa12.21□□□□□ -0.45
ATG4A-206ENST00000457035 IDH1O75874 414 aaKnown RBP12.21□□□□□ -0.45
ATG4A-206ENST00000457035 GLRX3O76003 335 aaKnown RBP12.21□□□□□ -0.45
ATG4A-206ENST00000457035 MAP3K12Q12852 859 aa12.21□□□□□ -0.45
ATG4A-206ENST00000457035 GSE1Q14687 1217 aa12.21□□□□□ -0.45
ATG4A-206ENST00000457035 FKBP1CQ5VVH2 108 aa12.21□□□□□ -0.45
ATG4A-206ENST00000457035 PRAMEF18Q5VWM3 479 aa12.21□□□□□ -0.45
ATG4A-206ENST00000457035 ERICH6BQ5W0A0 696 aa12.21□□□□□ -0.45
ATG4A-206ENST00000457035 ADGRA1Q86SQ6 560 aa12.21□□□□□ -0.45
ATG4A-206ENST00000457035 APOBEC3FQ8IUX4 373 aaKnown RBP12.21□□□□□ -0.45
ATG4A-206ENST00000457035 DEFB129Q9H1M3 183 aa12.21□□□□□ -0.45
ATG4A-206ENST00000457035 OSBPL3Q9H4L5 887 aa12.21□□□□□ -0.45
ATG4A-206ENST00000457035 USP40Q9NVE5 1235 aa12.21□□□□□ -0.45
ATG4A-206ENST00000457035 CDK5RAP2Q96SN8 1893 aa12.21□□□□□ -0.46
ATG4A-206ENST00000457035 THSD7BQ9C0I4 1608 aa12.2□□□□□ -0.46
ATG4A-206ENST00000457035 CYP7A1P22680 504 aa12.2□□□□□ -0.46
ATG4A-206ENST00000457035 PDE4AP27815 886 aa12.2□□□□□ -0.46
ATG4A-206ENST00000457035 BTDP43251 543 aa12.2□□□□□ -0.46
ATG4A-206ENST00000457035 CACNB3P54284 484 aa12.2□□□□□ -0.46
ATG4A-206ENST00000457035 RHBDL3P58872 404 aa12.2□□□□□ -0.46
ATG4A-206ENST00000457035 PPP4CP60510 307 aa12.2□□□□□ -0.46
ATG4A-206ENST00000457035 DEFB115Q30KQ5 88 aa12.2□□□□□ -0.46
ATG4A-206ENST00000457035 TMED8Q6PL24 325 aaPredicted RBP12.2□□□□□ -0.46
ATG4A-206ENST00000457035 PAXIP1Q6ZW49 1069 aaPredicted RBP12.2□□□□□ -0.46
ATG4A-206ENST00000457035 MAGEB6Q8N7X4 407 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms