RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 SLC5A1P13866 664 aa14.47□□□□□ -0.09
LINC00959-201ENST00000456581 GTF2E1P29083 439 aaPredicted RBP14.47□□□□□ -0.09
LINC00959-201ENST00000456581 ISM2Q6H9L7 571 aa14.47□□□□□ -0.09
LINC00959-201ENST00000456581 NBPF3Q9H094 633 aa14.47□□□□□ -0.09
LINC00959-201ENST00000456581 POLR3DP05423 398 aaPredicted RBP14.47□□□□□ -0.09
LINC00959-201ENST00000456581 STK11IPQ8N1F8 1099 aa14.47□□□□□ -0.09
LINC00959-201ENST00000456581 MAGEB6Q8N7X4 407 aa14.47□□□□□ -0.09
LINC00959-201ENST00000456581 CELF1Q92879 486 aaKnown RBP14.47□□□□□ -0.09
LINC00959-201ENST00000456581 ABCC12Q96J65 1359 aa14.46□□□□□ -0.09
LINC00959-201ENST00000456581 A0A0U1RQG5 324 aaPredicted RBP14.46□□□□□ -0.09
LINC00959-201ENST00000456581 GOLGA6L19H0YKK7 550 aa14.46□□□□□ -0.09
LINC00959-201ENST00000456581 BIN1O00499 593 aa14.46□□□□□ -0.09
LINC00959-201ENST00000456581 GYG1P46976 350 aa14.46□□□□□ -0.09
LINC00959-201ENST00000456581 ZBTB9Q96C00 473 aa14.46□□□□□ -0.09
LINC00959-201ENST00000456581 CCNL1Q9UK58 526 aaPredicted RBP14.46□□□□□ -0.09
LINC00959-201ENST00000456581 ZNF652Q9Y2D9 606 aa14.46□□□□□ -0.09
LINC00959-201ENST00000456581 MEX3CQ5U5Q3 659 aaKnown RBP14.46□□□□□ -0.1
LINC00959-201ENST00000456581 LRRC8AQ8IWT6 810 aa14.46□□□□□ -0.1
LINC00959-201ENST00000456581 DHX40Q8IX18 779 aaKnown RBP14.46□□□□□ -0.1
LINC00959-201ENST00000456581 AOPEPQ8N6M6 819 aa14.46□□□□□ -0.1
LINC00959-201ENST00000456581 FSIP1Q8NA03 581 aa14.46□□□□□ -0.1
LINC00959-201ENST00000456581 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.46□□□□□ -0.1
LINC00959-201ENST00000456581 COL5A3P25940 1745 aaPredicted RBP14.45□□□□□ -0.1
LINC00959-201ENST00000456581 TCRBV5S4A2TA0A5A2 114 aa14.45□□□□□ -0.1
LINC00959-201ENST00000456581 IMMTQ16891 758 aaKnown RBP14.45□□□□□ -0.1
LINC00959-201ENST00000456581 ZNF215Q9UL58 517 aaPredicted RBP14.45□□□□□ -0.1
LINC00959-201ENST00000456581 PRKAB2O43741 272 aa14.45□□□□□ -0.1
LINC00959-201ENST00000456581 TPM3P06753 285 aa14.45□□□□□ -0.1
LINC00959-201ENST00000456581 KLRK1P26718 216 aa14.45□□□□□ -0.1
LINC00959-201ENST00000456581 ANTXR2P58335 489 aa14.45□□□□□ -0.1
LINC00959-201ENST00000456581 TBC1D10CQ8IV04 446 aa14.45□□□□□ -0.1
LINC00959-201ENST00000456581 SMARCC2Q8TAQ2 1214 aa14.45□□□□□ -0.1
LINC00959-201ENST00000456581 AK7Q96M32 723 aa14.45□□□□□ -0.1
LINC00959-201ENST00000456581 RREB1Q92766 1687 aa14.45□□□□□ -0.1
LINC00959-201ENST00000456581 ZBTB22O15209 634 aa14.44□□□□□ -0.1
LINC00959-201ENST00000456581 PFKFB2O60825 505 aa14.44□□□□□ -0.1
LINC00959-201ENST00000456581 PDIA3P30101 505 aaKnown RBP14.44□□□□□ -0.1
LINC00959-201ENST00000456581 LRRFIP1Q32MZ4 808 aaKnown RBP14.44□□□□□ -0.1
LINC00959-201ENST00000456581 MIGA1Q8NAN2 632 aa14.44□□□□□ -0.1
LINC00959-201ENST00000456581 ZNF512BQ96KM6 892 aaPredicted RBP14.44□□□□□ -0.1
LINC00959-201ENST00000456581 ARMT1Q9H993 441 aa14.44□□□□□ -0.1
LINC00959-201ENST00000456581 CTNNA3Q9UI47 895 aa14.44□□□□□ -0.1
LINC00959-201ENST00000456581 BECN2A8MW95 431 aa14.44□□□□□ -0.1
LINC00959-201ENST00000456581 SKILP12757 684 aa14.44□□□□□ -0.1
LINC00959-201ENST00000456581 FDPSP14324 419 aaKnown RBP14.44□□□□□ -0.1
LINC00959-201ENST00000456581 CLEC4GQ6UXB4 293 aa14.44□□□□□ -0.1
LINC00959-201ENST00000456581 CFAP45Q9UL16 551 aa14.44□□□□□ -0.1
LINC00959-201ENST00000456581 LRP5O75197 1615 aa14.44□□□□□ -0.1
LINC00959-201ENST00000456581 BTAF1O14981 1849 aa14.43□□□□□ -0.1
LINC00959-201ENST00000456581 CCDC69A6NI79 296 aa14.43□□□□□ -0.1
LINC00959-201ENST00000456581 SMIM22K7EJ46 135 aa14.43□□□□□ -0.1
LINC00959-201ENST00000456581 ZNF213O14771 459 aa14.43□□□□□ -0.1
LINC00959-201ENST00000456581 PRC1O43663 620 aa14.43□□□□□ -0.1
LINC00959-201ENST00000456581 MBD4O95243 580 aa14.43□□□□□ -0.1
LINC00959-201ENST00000456581 HMGB1P09429 215 aaKnown RBP14.43□□□□□ -0.1
LINC00959-201ENST00000456581 UQCRFS1P1P0C7P4 283 aa14.43□□□□□ -0.1
LINC00959-201ENST00000456581 ARHGEF1Q92888 912 aaKnown RBP14.43□□□□□ -0.1
LINC00959-201ENST00000456581 SENP2Q9HC62 589 aa14.43□□□□□ -0.1
LINC00959-201ENST00000456581 CLIC4Q9Y696 253 aa14.43□□□□□ -0.1
LINC00959-201ENST00000456581 RXRAP19793 462 aa14.43□□□□□ -0.1
LINC00959-201ENST00000456581 NDUFA8P51970 172 aa14.43□□□□□ -0.1
LINC00959-201ENST00000456581 TTF1Q15361 905 aaPredicted RBP14.43□□□□□ -0.1
LINC00959-201ENST00000456581 CEP135Q66GS9 1140 aa14.43□□□□□ -0.1
LINC00959-201ENST00000456581 AIDAQ96BJ3 306 aa14.43□□□□□ -0.1
LINC00959-201ENST00000456581 GJD4Q96KN9 370 aaPredicted RBP14.43□□□□□ -0.1
LINC00959-201ENST00000456581 STRBPQ96SI9 672 aaKnown RBP14.43□□□□□ -0.1
LINC00959-201ENST00000456581 AGXT2Q9BYV1 514 aa14.43□□□□□ -0.1
LINC00959-201ENST00000456581 ABCF2Q9UG63 623 aa14.43□□□□□ -0.1
LINC00959-201ENST00000456581 PCDHA7Q9UN72 937 aa14.43□□□□□ -0.1
LINC00959-201ENST00000456581 AFF2P51816 1311 aa14.43□□□□□ -0.1
LINC00959-201ENST00000456581 ATRNO75882 1429 aa14.42□□□□□ -0.1
LINC00959-201ENST00000456581 GOLGA8FQ08AF8 430 aa14.42□□□□□ -0.1
LINC00959-201ENST00000456581 GOLGA8DPQ0D2H9 430 aa14.42□□□□□ -0.1
LINC00959-201ENST00000456581 DPCR1Q3MIW9 517 aa14.42□□□□□ -0.1
LINC00959-201ENST00000456581 ZNF772Q68DY9 489 aaPredicted RBP14.42□□□□□ -0.1
LINC00959-201ENST00000456581 CCDC73Q6ZRK6 1079 aa14.42□□□□□ -0.1
LINC00959-201ENST00000456581 ANKRD18AQ8IVF6 992 aa14.42□□□□□ -0.1
LINC00959-201ENST00000456581 MB21D2Q8IYB1 491 aaPredicted RBP14.42□□□□□ -0.1
LINC00959-201ENST00000456581 CCDC112Q8NEF3 446 aa14.42□□□□□ -0.1
LINC00959-201ENST00000456581 EPB41L4AQ9HCS5 686 aaPredicted RBP14.42□□□□□ -0.1
LINC00959-201ENST00000456581 TACC3Q9Y6A5 838 aa14.42□□□□□ -0.1
LINC00959-201ENST00000456581 CNTNAP4Q9C0A0 1308 aa14.42□□□□□ -0.1
LINC00959-201ENST00000456581 KINO60870 393 aaKnown RBP14.42□□□□□ -0.1
LINC00959-201ENST00000456581 RPS6KA4O75676 772 aa14.42□□□□□ -0.1
LINC00959-201ENST00000456581 UBE3CQ15386 1083 aa14.42□□□□□ -0.1
LINC00959-201ENST00000456581 ADGRA1Q86SQ6 560 aa14.42□□□□□ -0.1
LINC00959-201ENST00000456581 NBPF5PQ86XG9 351 aaPredicted RBP14.42□□□□□ -0.1
LINC00959-201ENST00000456581 ENGASEQ8NFI3 743 aa14.42□□□□□ -0.1
LINC00959-201ENST00000456581 RCOR1Q9UKL0 485 aa14.42□□□□□ -0.1
LINC00959-201ENST00000456581 JAG2Q9Y219 1238 aa14.42□□□□□ -0.1
LINC00959-201ENST00000456581 ZPR1O75312 459 aa14.42□□□□□ -0.1
LINC00959-201ENST00000456581 CTDSPL2Q05D32 466 aa14.42□□□□□ -0.1
LINC00959-201ENST00000456581 STX1AQ16623 288 aa14.42□□□□□ -0.1
LINC00959-201ENST00000456581 KMT5BQ4FZB7 885 aa14.42□□□□□ -0.1
LINC00959-201ENST00000456581 CYB5R4Q7L1T6 521 aa14.42□□□□□ -0.1
LINC00959-201ENST00000456581 SETDB2Q96T68 719 aa14.42□□□□□ -0.1
LINC00959-201ENST00000456581 ZSCAN16Q9H4T2 348 aaPredicted RBP14.42□□□□□ -0.1
LINC00959-201ENST00000456581 LRRC4BQ9NT99 713 aa14.42□□□□□ -0.1
LINC00959-201ENST00000456581 NARFQ9UHQ1 456 aa14.42□□□□□ -0.1
LINC00959-201ENST00000456581 SMTNL1A8MU46 457 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms