RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 UQCRFS1P1P0C7P4 283 aa22.01■■□□□ 1.11
MSH6-207ENST00000456246 DCAF15Q66K64 600 aa22.01■■□□□ 1.11
MSH6-207ENST00000456246 ABCF2Q9UG63 623 aa22.01■■□□□ 1.11
MSH6-207ENST00000456246 CSADQ9Y600 493 aa22.01■■□□□ 1.11
MSH6-207ENST00000456246 SURF6O75683 361 aaKnown RBP22■■□□□ 1.11
MSH6-207ENST00000456246 ARID4AP29374 1257 aaPredicted RBP22■■□□□ 1.11
MSH6-207ENST00000456246 MAP3K9P80192 1104 aa22■■□□□ 1.11
MSH6-207ENST00000456246 CDC42EP5Q6NZY7 148 aa22■■□□□ 1.11
MSH6-207ENST00000456246 CDAN1Q8IWY9 1227 aa22■■□□□ 1.11
MSH6-207ENST00000456246 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22■■□□□ 1.11
MSH6-207ENST00000456246 FAM151AQ8WW52 585 aa22■■□□□ 1.11
MSH6-207ENST00000456246 C1orf115Q9H7X2 142 aa22■■□□□ 1.11
MSH6-207ENST00000456246 NOP58Q9Y2X3 529 aaKnown RBP22■■□□□ 1.11
MSH6-207ENST00000456246 GAKO14976 1311 aa22■■□□□ 1.11
MSH6-207ENST00000456246 FAM163AQ96GL9 167 aaPredicted RBP21.99■■□□□ 1.11
MSH6-207ENST00000456246 MYH2Q9UKX2 1941 aa21.98■■□□□ 1.11
MSH6-207ENST00000456246 DGKZQ13574 1117 aa21.98■■□□□ 1.11
MSH6-207ENST00000456246 TNNI3KQ59H18 835 aa21.98■■□□□ 1.11
MSH6-207ENST00000456246 OTUD7BQ6GQQ9 843 aa21.98■■□□□ 1.11
MSH6-207ENST00000456246 ERICH6Q7L0X2 663 aa21.98■■□□□ 1.11
MSH6-207ENST00000456246 SPATA5Q8NB90 893 aa21.98■■□□□ 1.11
MSH6-207ENST00000456246 PANK1Q8TE04 598 aa21.98■■□□□ 1.11
MSH6-207ENST00000456246 MCOLN1Q9GZU1 580 aa21.98■■□□□ 1.11
MSH6-207ENST00000456246 CHMP4BQ9H444 224 aaKnown RBP21.98■■□□□ 1.11
MSH6-207ENST00000456246 USP40Q9NVE5 1235 aa21.98■■□□□ 1.11
MSH6-207ENST00000456246 HMG20BQ9P0W2 317 aa21.98■■□□□ 1.11
MSH6-207ENST00000456246 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.98■■□□□ 1.11
MSH6-207ENST00000456246 FPGT-TNNI3KV9GXZ4 949 aa21.98■■□□□ 1.11
MSH6-207ENST00000456246 VGLL4Q14135 290 aa21.97■■□□□ 1.11
MSH6-207ENST00000456246 CCDC158Q5M9N0 1113 aa21.97■■□□□ 1.11
MSH6-207ENST00000456246 CEP85Q6P2H3 762 aa21.97■■□□□ 1.11
MSH6-207ENST00000456246 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.97■■□□□ 1.11
MSH6-207ENST00000456246 OPTNQ96CV9 577 aa21.97■■□□□ 1.11
MSH6-207ENST00000456246 ELP3Q9H9T3 547 aa21.97■■□□□ 1.11
MSH6-207ENST00000456246 RCAN3Q9UKA8 241 aa21.97■■□□□ 1.11
MSH6-207ENST00000456246 DDX19BQ9UMR2 479 aa21.97■■□□□ 1.11
MSH6-207ENST00000456246 GSTO1P78417 241 aa21.96■■□□□ 1.11
MSH6-207ENST00000456246 IFNL1Q8IU54 200 aa21.96■■□□□ 1.11
MSH6-207ENST00000456246 IDI2Q9BXS1 227 aa21.96■■□□□ 1.11
MSH6-207ENST00000456246 ZNF341Q9BYN7 854 aa21.96■■□□□ 1.11
MSH6-207ENST00000456246 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.96■■□□□ 1.11
MSH6-207ENST00000456246 TESPA1A2RU30 521 aaPredicted RBP21.95■■□□□ 1.1
MSH6-207ENST00000456246 IGSF3O75054 1194 aa21.95■■□□□ 1.1
MSH6-207ENST00000456246 TBC1D8O95759 1140 aa21.95■■□□□ 1.1
MSH6-207ENST00000456246 MAP4K4O95819 1239 aaPredicted RBP21.95■■□□□ 1.1
MSH6-207ENST00000456246 LDHCP07864 332 aa21.95■■□□□ 1.1
MSH6-207ENST00000456246 ERC1Q8IUD2 1116 aa21.95■■□□□ 1.1
MSH6-207ENST00000456246 WRNIP1Q96S55 665 aa21.95■■□□□ 1.1
MSH6-207ENST00000456246 MROH7-TTC4A0A0A0MT08 1334 aa21.95■■□□□ 1.1
MSH6-207ENST00000456246 SPDYE5A6NIY4 337 aa21.94■■□□□ 1.1
MSH6-207ENST00000456246 GPR25O00155 361 aa21.94■■□□□ 1.1
MSH6-207ENST00000456246 ENTPD3O75355 529 aa21.94■■□□□ 1.1
MSH6-207ENST00000456246 GJA5P36382 358 aa21.94■■□□□ 1.1
MSH6-207ENST00000456246 HSP90AB4PQ58FF6 505 aa21.94■■□□□ 1.1
MSH6-207ENST00000456246 TTC39AQ5SRH9 613 aa21.94■■□□□ 1.1
MSH6-207ENST00000456246 CTU1Q7Z7A3 348 aaKnown RBP21.94■■□□□ 1.1
MSH6-207ENST00000456246 ZNF512BQ96KM6 892 aaPredicted RBP21.94■■□□□ 1.1
MSH6-207ENST00000456246 MCAMP43121 646 aa21.93■■□□□ 1.1
MSH6-207ENST00000456246 GTF2A2P52657 109 aa21.93■■□□□ 1.1
MSH6-207ENST00000456246 MECOMQ03112 1051 aa21.93■■□□□ 1.1
MSH6-207ENST00000456246 TCP10Q12799 353 aa21.93■■□□□ 1.1
MSH6-207ENST00000456246 NFIAQ12857 509 aa21.93■■□□□ 1.1
MSH6-207ENST00000456246 RFX7Q2KHR2 1363 aa21.93■■□□□ 1.1
MSH6-207ENST00000456246 ERO1BQ86YB8 467 aa21.93■■□□□ 1.1
MSH6-207ENST00000456246 ZNF296Q8WUU4 475 aaPredicted RBP21.93■■□□□ 1.1
MSH6-207ENST00000456246 FAM198AQ9UFP1 575 aa21.93■■□□□ 1.1
MSH6-207ENST00000456246 AK9Q5TCS8 1911 aa21.92■■□□□ 1.1
MSH6-207ENST00000456246 IGF2BP3O00425 579 aaKnown RBP eCLIP21.92■■□□□ 1.1
MSH6-207ENST00000456246 BTDP43251 543 aa21.92■■□□□ 1.1
MSH6-207ENST00000456246 PKN2Q16513 984 aaKnown RBP21.92■■□□□ 1.1
MSH6-207ENST00000456246 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.92■■□□□ 1.1
MSH6-207ENST00000456246 DBNDD2Q9BQY9 259 aa21.92■■□□□ 1.1
MSH6-207ENST00000456246 GPR75-ASB3A0A0A6YYF3 556 aa21.91■■□□□ 1.1
MSH6-207ENST00000456246 HMMRO75330 724 aa21.91■■□□□ 1.1
MSH6-207ENST00000456246 NPM3O75607 178 aaKnown RBP21.91■■□□□ 1.1
MSH6-207ENST00000456246 PI16Q6UXB8 463 aa21.91■■□□□ 1.1
MSH6-207ENST00000456246 RPAP2Q8IXW5 612 aaPredicted RBP21.91■■□□□ 1.1
MSH6-207ENST00000456246 NSUN4Q96CB9 384 aaKnown RBP21.91■■□□□ 1.1
MSH6-207ENST00000456246 OTUD5Q96G74 571 aa21.91■■□□□ 1.1
MSH6-207ENST00000456246 RAI14Q9P0K7 980 aa21.91■■□□□ 1.1
MSH6-207ENST00000456246 LRP2BPQ9P2M1 347 aa21.91■■□□□ 1.1
MSH6-207ENST00000456246 SNCAIPQ9Y6H5 919 aa21.91■■□□□ 1.1
MSH6-207ENST00000456246 FKTNO75072 461 aa21.9■■□□□ 1.1
MSH6-207ENST00000456246 RGS3P49796 1198 aa21.9■■□□□ 1.1
MSH6-207ENST00000456246 MS4A4AQ96JQ5 239 aa21.9■■□□□ 1.1
MSH6-207ENST00000456246 ZNF112Q9UJU3 913 aa21.9■■□□□ 1.1
MSH6-207ENST00000456246 DOCK2Q92608 1830 aa21.9■■□□□ 1.1
MSH6-207ENST00000456246 CCDC85CA6NKD9 419 aa21.89■■□□□ 1.09
MSH6-207ENST00000456246 WDHD1O75717 1129 aaPredicted RBP21.89■■□□□ 1.09
MSH6-207ENST00000456246 PPIL2Q13356 520 aa21.89■■□□□ 1.09
MSH6-207ENST00000456246 MIGA2Q7L4E1 593 aa21.89■■□□□ 1.09
MSH6-207ENST00000456246 ZBTB40Q9NUA8 1239 aa21.89■■□□□ 1.09
MSH6-207ENST00000456246 DBNLQ9UJU6 430 aaKnown RBP21.89■■□□□ 1.09
MSH6-207ENST00000456246 COG6Q9Y2V7 657 aa21.89■■□□□ 1.09
MSH6-207ENST00000456246 MAST2Q6P0Q8 1798 aa21.89■■□□□ 1.09
MSH6-207ENST00000456246 CCL15-CCL14A0A0B4J2E2 113 aa21.88■■□□□ 1.09
MSH6-207ENST00000456246 PPATQ06203 517 aa21.88■■□□□ 1.09
MSH6-207ENST00000456246 PDE3AQ14432 1141 aa21.88■■□□□ 1.09
MSH6-207ENST00000456246 CCL15Q16663 113 aa21.88■■□□□ 1.09
MSH6-207ENST00000456246 NOL9Q5SY16 702 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms