RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 MAP3K11Q16584 847 aa17.31■□□□□ 0.36
HDAC4-205ENST00000454542 C2orf69Q8N8R5 385 aa17.31■□□□□ 0.36
HDAC4-205ENST00000454542 TMOD2Q9NZR1 351 aa17.31■□□□□ 0.36
HDAC4-205ENST00000454542 MYH7P12883 1935 aa17.31■□□□□ 0.36
HDAC4-205ENST00000454542 COL2A1P02458 1487 aaPredicted RBP17.31■□□□□ 0.36
HDAC4-205ENST00000454542 DDX60LQ5H9U9 1706 aaKnown RBP17.3■□□□□ 0.36
HDAC4-205ENST00000454542 TCP10L2B9ZVM9 353 aa17.3■□□□□ 0.36
HDAC4-205ENST00000454542 ATP5JP18859 108 aa17.3■□□□□ 0.36
HDAC4-205ENST00000454542 NF2P35240 595 aa17.3■□□□□ 0.36
HDAC4-205ENST00000454542 TNNI2P48788 182 aa17.3■□□□□ 0.36
HDAC4-205ENST00000454542 CACNB3P54284 484 aa17.3■□□□□ 0.36
HDAC4-205ENST00000454542 RHBDL3P58872 404 aa17.3■□□□□ 0.36
HDAC4-205ENST00000454542 GSTO1P78417 241 aa17.3■□□□□ 0.36
HDAC4-205ENST00000454542 TMED8Q6PL24 325 aaPredicted RBP17.3■□□□□ 0.36
HDAC4-205ENST00000454542 CDAN1Q8IWY9 1227 aa17.3■□□□□ 0.36
HDAC4-205ENST00000454542 IDI2Q9BXS1 227 aa17.3■□□□□ 0.36
HDAC4-205ENST00000454542 ATRNL1Q5VV63 1379 aa17.29■□□□□ 0.36
HDAC4-205ENST00000454542 SALL3Q9BXA9 1300 aa17.29■□□□□ 0.36
HDAC4-205ENST00000454542 WDR33Q9C0J8 1336 aaKnown RBP17.29■□□□□ 0.36
HDAC4-205ENST00000454542 PCNTO95613 3336 aa17.29■□□□□ 0.36
HDAC4-205ENST00000454542 MAP4K4O95819 1239 aaPredicted RBP17.29■□□□□ 0.36
HDAC4-205ENST00000454542 BTDP43251 543 aa17.29■□□□□ 0.36
HDAC4-205ENST00000454542 NFIAQ12857 509 aa17.29■□□□□ 0.36
HDAC4-205ENST00000454542 NBPF12Q5TAG4 269 aaPredicted RBP17.29■□□□□ 0.36
HDAC4-205ENST00000454542 GCC1Q96CN9 775 aa17.29■□□□□ 0.36
HDAC4-205ENST00000454542 CAPNS2Q96L46 248 aa17.29■□□□□ 0.36
HDAC4-205ENST00000454542 TMEM39BQ9GZU3 492 aa17.29■□□□□ 0.36
HDAC4-205ENST00000454542 ANTXR1Q9H6X2 564 aa17.29■□□□□ 0.36
HDAC4-205ENST00000454542 RAI14Q9P0K7 980 aa17.29■□□□□ 0.36
HDAC4-205ENST00000454542 LRP2BPQ9P2M1 347 aa17.29■□□□□ 0.36
HDAC4-205ENST00000454542 FAM198AQ9UFP1 575 aa17.29■□□□□ 0.36
HDAC4-205ENST00000454542 NDUFB9Q9Y6M9 179 aa17.29■□□□□ 0.36
HDAC4-205ENST00000454542 FAM155AB1AL88 458 aaPredicted RBP17.28■□□□□ 0.36
HDAC4-205ENST00000454542 WDHD1O75717 1129 aaPredicted RBP17.28■□□□□ 0.36
HDAC4-205ENST00000454542 LDHCP07864 332 aa17.28■□□□□ 0.36
HDAC4-205ENST00000454542 ECE1P42892 770 aa17.28■□□□□ 0.36
HDAC4-205ENST00000454542 CYP4F22Q6NT55 531 aa17.28■□□□□ 0.36
HDAC4-205ENST00000454542 RGMBQ6NW40 437 aa17.28■□□□□ 0.36
HDAC4-205ENST00000454542 SIPA1L1O43166 1804 aa17.27■□□□□ 0.36
HDAC4-205ENST00000454542 NPM3O75607 178 aaKnown RBP17.27■□□□□ 0.36
HDAC4-205ENST00000454542 SLC10A3P09131 477 aa17.27■□□□□ 0.36
HDAC4-205ENST00000454542 SUPT20HL1Q3ZLR7 823 aa17.27■□□□□ 0.36
HDAC4-205ENST00000454542 LDLRAD1Q5T700 205 aa17.27■□□□□ 0.36
HDAC4-205ENST00000454542 NAA16Q6N069 864 aaPredicted RBP17.27■□□□□ 0.36
HDAC4-205ENST00000454542 MOB2Q70IA6 237 aa17.27■□□□□ 0.36
HDAC4-205ENST00000454542 ADGRA1Q86SQ6 560 aa17.27■□□□□ 0.36
HDAC4-205ENST00000454542 SMC5Q8IY18 1101 aa17.27■□□□□ 0.36
HDAC4-205ENST00000454542 FAM151AQ8WW52 585 aa17.27■□□□□ 0.36
HDAC4-205ENST00000454542 HAUS7Q99871 368 aa17.27■□□□□ 0.36
HDAC4-205ENST00000454542 USP40Q9NVE5 1235 aa17.27■□□□□ 0.36
HDAC4-205ENST00000454542 UNCXA6NJT0 531 aa17.26■□□□□ 0.35
HDAC4-205ENST00000454542 ENTPD3O75355 529 aa17.26■□□□□ 0.35
HDAC4-205ENST00000454542 PPP4CP60510 307 aa17.26■□□□□ 0.35
HDAC4-205ENST00000454542 TTF1Q15361 905 aaPredicted RBP17.26■□□□□ 0.35
HDAC4-205ENST00000454542 RASAL3Q86YV0 1011 aa17.26■□□□□ 0.35
HDAC4-205ENST00000454542 DDX4Q9NQI0 724 aaKnown RBP17.26■□□□□ 0.35
HDAC4-205ENST00000454542 ECHDC1Q9NTX5 307 aa17.26■□□□□ 0.35
HDAC4-205ENST00000454542 IDH1O75874 414 aaKnown RBP17.25■□□□□ 0.35
HDAC4-205ENST00000454542 ARMC9Q7Z3E5 817 aa17.25■□□□□ 0.35
HDAC4-205ENST00000454542 TTC41PQ6P2S7 1318 aa17.24■□□□□ 0.35
HDAC4-205ENST00000454542 UBE2Q2LH0YL09 131 aa17.24■□□□□ 0.35
HDAC4-205ENST00000454542 PPP1R12BO60237 982 aaPredicted RBP17.24■□□□□ 0.35
HDAC4-205ENST00000454542 RGS3P49796 1198 aa17.24■□□□□ 0.35
HDAC4-205ENST00000454542 DNAJC2Q99543 621 aaKnown RBP17.24■□□□□ 0.35
HDAC4-205ENST00000454542 BOLA2Q9H3K6 86 aa17.24■□□□□ 0.35
HDAC4-205ENST00000454542 PAG1Q9NWQ8 432 aa17.24■□□□□ 0.35
HDAC4-205ENST00000454542 ANGEL1Q9UNK9 670 aaKnown RBP17.24■□□□□ 0.35
HDAC4-205ENST00000454542 FZD1Q9UP38 647 aa17.24■□□□□ 0.35
HDAC4-205ENST00000454542 NAV1Q8NEY1 1877 aa17.23■□□□□ 0.35
HDAC4-205ENST00000454542 GOLIM4O00461 696 aa17.23■□□□□ 0.35
HDAC4-205ENST00000454542 USP2O75604 605 aaPredicted RBP17.23■□□□□ 0.35
HDAC4-205ENST00000454542 MAP2K2P36507 400 aa17.23■□□□□ 0.35
HDAC4-205ENST00000454542 MAP3K12Q12852 859 aa17.23■□□□□ 0.35
HDAC4-205ENST00000454542 NOGQ13253 232 aa17.23■□□□□ 0.35
HDAC4-205ENST00000454542 PAXIP1Q6ZW49 1069 aaPredicted RBP17.23■□□□□ 0.35
HDAC4-205ENST00000454542 MAGEB6Q8N7X4 407 aa17.23■□□□□ 0.35
HDAC4-205ENST00000454542 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.23■□□□□ 0.35
HDAC4-205ENST00000454542 PI4K2BQ8TCG2 481 aa17.23■□□□□ 0.35
HDAC4-205ENST00000454542 OTUD7AQ8TE49 926 aaPredicted RBP17.23■□□□□ 0.35
HDAC4-205ENST00000454542 CCDC102AQ96A19 550 aa17.23■□□□□ 0.35
HDAC4-205ENST00000454542 EDC3Q96F86 508 aaKnown RBP17.23■□□□□ 0.35
HDAC4-205ENST00000454542 GPATCH3Q96I76 525 aa17.23■□□□□ 0.35
HDAC4-205ENST00000454542 RWDD1Q9H446 243 aaPredicted RBP17.23■□□□□ 0.35
HDAC4-205ENST00000454542 TCRBV5S4A2TA0A5A2 114 aa17.22■□□□□ 0.35
HDAC4-205ENST00000454542 AOC2O75106 756 aa17.22■□□□□ 0.35
HDAC4-205ENST00000454542 IGHDP01880 384 aa17.22■□□□□ 0.35
HDAC4-205ENST00000454542 PDE6AP16499 860 aa17.22■□□□□ 0.35
HDAC4-205ENST00000454542 IREB2P48200 963 aaKnown RBP17.22■□□□□ 0.35
HDAC4-205ENST00000454542 ZNF157P51786 506 aaPredicted RBP17.22■□□□□ 0.35
HDAC4-205ENST00000454542 IRX6P78412 446 aaPredicted RBP17.22■□□□□ 0.35
HDAC4-205ENST00000454542 TTLL12Q14166 644 aaPredicted RBP17.22■□□□□ 0.35
HDAC4-205ENST00000454542 SH3BP5LQ7L8J4 393 aa17.22■□□□□ 0.35
HDAC4-205ENST00000454542 CERS3Q8IU89 383 aa17.22■□□□□ 0.35
HDAC4-205ENST00000454542 ZFPM1Q8IX07 1006 aa17.22■□□□□ 0.35
HDAC4-205ENST00000454542 HOOK2Q96ED9 719 aa17.22■□□□□ 0.35
HDAC4-205ENST00000454542 AATFQ9NY61 560 aaKnown RBP eCLIP17.22■□□□□ 0.35
HDAC4-205ENST00000454542 BAG3O95817 575 aa17.21■□□□□ 0.35
HDAC4-205ENST00000454542 PLCG2P16885 1265 aa17.21■□□□□ 0.35
HDAC4-205ENST00000454542 CYP7A1P22680 504 aa17.21■□□□□ 0.35
HDAC4-205ENST00000454542 TCP10Q12799 353 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms