RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 MMP14P50281 582 aa7.54□□□□□ -1.2
HLA-DPA3-207ENST00000454398 SNAPC2Q13487 334 aa7.54□□□□□ -1.2
HLA-DPA3-207ENST00000454398 RABL6Q3YEC7 729 aaPredicted RBP7.54□□□□□ -1.2
HLA-DPA3-207ENST00000454398 INTS3Q68E01 1043 aaKnown RBP7.54□□□□□ -1.2
HLA-DPA3-207ENST00000454398 CHRDL2Q6WN34 429 aa7.54□□□□□ -1.2
HLA-DPA3-207ENST00000454398 WDR63Q8IWG1 891 aa7.54□□□□□ -1.2
HLA-DPA3-207ENST00000454398 ZFPM1Q8IX07 1006 aa7.54□□□□□ -1.2
HLA-DPA3-207ENST00000454398 ZDHHC15Q96MV8 337 aa7.54□□□□□ -1.2
HLA-DPA3-207ENST00000454398 TMEM106CQ9BVX2 250 aa7.54□□□□□ -1.2
HLA-DPA3-207ENST00000454398 TMOD2Q9NZR1 351 aa7.54□□□□□ -1.2
HLA-DPA3-207ENST00000454398 DAGLAQ9Y4D2 1042 aa7.54□□□□□ -1.2
HLA-DPA3-207ENST00000454398 ATRNL1Q5VV63 1379 aa7.54□□□□□ -1.2
HLA-DPA3-207ENST00000454398 ALPK3Q96L96 1907 aa7.54□□□□□ -1.2
HLA-DPA3-207ENST00000454398 MYH2Q9UKX2 1941 aa7.54□□□□□ -1.2
HLA-DPA3-207ENST00000454398 UTYO14607 1347 aa7.53□□□□□ -1.2
HLA-DPA3-207ENST00000454398 PHIPQ8WWQ0 1821 aa7.53□□□□□ -1.2
HLA-DPA3-207ENST00000454398 FAM196BA6NMK8 535 aa7.53□□□□□ -1.2
HLA-DPA3-207ENST00000454398 TLR2O60603 784 aa7.53□□□□□ -1.2
HLA-DPA3-207ENST00000454398 PDE8BO95263 885 aa7.53□□□□□ -1.2
HLA-DPA3-207ENST00000454398 CETPP11597 493 aa7.53□□□□□ -1.2
HLA-DPA3-207ENST00000454398 FGFR2P21802 821 aa7.53□□□□□ -1.2
HLA-DPA3-207ENST00000454398 ADORA1P30542 326 aa7.53□□□□□ -1.2
HLA-DPA3-207ENST00000454398 PRKCZQ05513 592 aa7.53□□□□□ -1.2
HLA-DPA3-207ENST00000454398 PPIL2Q13356 520 aa7.53□□□□□ -1.2
HLA-DPA3-207ENST00000454398 PUM3Q15397 648 aaKnown RBP7.53□□□□□ -1.2
HLA-DPA3-207ENST00000454398 CAVIN4Q5BKX8 364 aa7.53□□□□□ -1.2
HLA-DPA3-207ENST00000454398 ERO1BQ86YB8 467 aa7.53□□□□□ -1.2
HLA-DPA3-207ENST00000454398 MRPL50Q8N5N7 158 aaKnown RBP7.53□□□□□ -1.2
HLA-DPA3-207ENST00000454398 SSH1Q8WYL5 1049 aa7.53□□□□□ -1.2
HLA-DPA3-207ENST00000454398 GCC1Q96CN9 775 aa7.53□□□□□ -1.2
HLA-DPA3-207ENST00000454398 RFX7Q2KHR2 1363 aa7.53□□□□□ -1.2
HLA-DPA3-207ENST00000454398 MYPNQ86TC9 1320 aa7.52□□□□□ -1.2
HLA-DPA3-207ENST00000454398 DOCK3Q8IZD9 2030 aa7.52□□□□□ -1.2
HLA-DPA3-207ENST00000454398 A0A0C4DFX4 3053 aa7.52□□□□□ -1.21
HLA-DPA3-207ENST00000454398 PDHXO00330 501 aa7.52□□□□□ -1.21
HLA-DPA3-207ENST00000454398 ANP32CO43423 234 aa7.52□□□□□ -1.21
HLA-DPA3-207ENST00000454398 ELNP15502 786 aa7.52□□□□□ -1.21
HLA-DPA3-207ENST00000454398 OSBPP22059 807 aa7.52□□□□□ -1.21
HLA-DPA3-207ENST00000454398 PSMC4P43686 418 aa7.52□□□□□ -1.21
HLA-DPA3-207ENST00000454398 PHKA1P46020 1223 aa7.52□□□□□ -1.21
HLA-DPA3-207ENST00000454398 CDC42EP5Q6NZY7 148 aa7.52□□□□□ -1.21
HLA-DPA3-207ENST00000454398 SH3BP5LQ7L8J4 393 aa7.52□□□□□ -1.21
HLA-DPA3-207ENST00000454398 UBE2Q1Q7Z7E8 422 aa7.52□□□□□ -1.21
HLA-DPA3-207ENST00000454398 TBC1D22AQ8WUA7 517 aa7.52□□□□□ -1.21
HLA-DPA3-207ENST00000454398 FAM198AQ9UFP1 575 aa7.52□□□□□ -1.21
HLA-DPA3-207ENST00000454398 TAOK2Q9UL54 1235 aa7.52□□□□□ -1.21
HLA-DPA3-207ENST00000454398 PA2G4Q9UQ80 394 aaKnown RBP7.52□□□□□ -1.21
HLA-DPA3-207ENST00000454398 ATAD5Q96QE3 1844 aa7.52□□□□□ -1.21
HLA-DPA3-207ENST00000454398 UNCXA6NJT0 531 aa7.51□□□□□ -1.21
HLA-DPA3-207ENST00000454398 FMNL1O95466 1100 aaPredicted RBP7.51□□□□□ -1.21
HLA-DPA3-207ENST00000454398 IFIT1P09914 478 aaKnown RBP7.51□□□□□ -1.21
HLA-DPA3-207ENST00000454398 CCL5P13501 91 aa7.51□□□□□ -1.21
HLA-DPA3-207ENST00000454398 SLC5A1P13866 664 aa7.51□□□□□ -1.21
HLA-DPA3-207ENST00000454398 ZEB1P37275 1124 aaPredicted RBP7.51□□□□□ -1.21
HLA-DPA3-207ENST00000454398 PICALMQ13492 652 aa7.51□□□□□ -1.21
HLA-DPA3-207ENST00000454398 ATP2B3Q16720 1220 aa7.51□□□□□ -1.21
HLA-DPA3-207ENST00000454398 DCAF15Q66K64 600 aa7.51□□□□□ -1.21
HLA-DPA3-207ENST00000454398 GPAT2Q6NUI2 795 aa7.51□□□□□ -1.21
HLA-DPA3-207ENST00000454398 C17orf99Q6UX52 265 aa7.51□□□□□ -1.21
HLA-DPA3-207ENST00000454398 ATG9AQ7Z3C6 839 aa7.51□□□□□ -1.21
HLA-DPA3-207ENST00000454398 RAET1EQ8TD07 263 aa7.51□□□□□ -1.21
HLA-DPA3-207ENST00000454398 ZNF384Q8TF68 577 aa7.51□□□□□ -1.21
HLA-DPA3-207ENST00000454398 ZNF341Q9BYN7 854 aa7.51□□□□□ -1.21
HLA-DPA3-207ENST00000454398 USP44Q9H0E7 712 aa7.51□□□□□ -1.21
HLA-DPA3-207ENST00000454398 UNC93B1Q9H1C4 597 aa7.51□□□□□ -1.21
HLA-DPA3-207ENST00000454398 PRO3102Q9H379 93 aa7.51□□□□□ -1.21
HLA-DPA3-207ENST00000454398 RBM27Q9P2N5 1060 aaKnown RBP7.51□□□□□ -1.21
HLA-DPA3-207ENST00000454398 SRRDQ9UH36 339 aa7.51□□□□□ -1.21
HLA-DPA3-207ENST00000454398 GABRQQ9UN88 632 aa7.51□□□□□ -1.21
HLA-DPA3-207ENST00000454398 LOC285556D6RIA3 1793 aa7.51□□□□□ -1.21
HLA-DPA3-207ENST00000454398 MAST3O60307 1309 aa7.51□□□□□ -1.21
HLA-DPA3-207ENST00000454398 SIPA1L1O43166 1804 aa7.5□□□□□ -1.21
HLA-DPA3-207ENST00000454398 TRIM75PA6NK02 468 aa7.5□□□□□ -1.21
HLA-DPA3-207ENST00000454398 EYA2O00167 538 aa7.5□□□□□ -1.21
HLA-DPA3-207ENST00000454398 RGS3P49796 1198 aa7.5□□□□□ -1.21
HLA-DPA3-207ENST00000454398 HDLBPQ00341 1268 aaKnown RBP7.5□□□□□ -1.21
HLA-DPA3-207ENST00000454398 RASGRF1Q13972 1273 aa7.5□□□□□ -1.21
HLA-DPA3-207ENST00000454398 KIF22Q14807 665 aa7.5□□□□□ -1.21
HLA-DPA3-207ENST00000454398 NCBP3Q53F19 620 aaKnown RBP7.5□□□□□ -1.21
HLA-DPA3-207ENST00000454398 PI16Q6UXB8 463 aa7.5□□□□□ -1.21
HLA-DPA3-207ENST00000454398 GADL1Q6ZQY3 521 aa7.5□□□□□ -1.21
HLA-DPA3-207ENST00000454398 NBPF11Q86T75 865 aa7.5□□□□□ -1.21
HLA-DPA3-207ENST00000454398 FAM83AQ86UY5 434 aa7.5□□□□□ -1.21
HLA-DPA3-207ENST00000454398 CDCA7LQ96GN5 454 aa7.5□□□□□ -1.21
HLA-DPA3-207ENST00000454398 DDX4Q9NQI0 724 aaKnown RBP7.5□□□□□ -1.21
HLA-DPA3-207ENST00000454398 SMC4Q9NTJ3 1288 aa7.5□□□□□ -1.21
HLA-DPA3-207ENST00000454398 BIN2Q9UBW5 565 aaPredicted RBP7.5□□□□□ -1.21
HLA-DPA3-207ENST00000454398 LRRFIP2Q9Y608 721 aaKnown RBP7.5□□□□□ -1.21
HLA-DPA3-207ENST00000454398 MAST2Q6P0Q8 1798 aa7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 LAMA2P24043 3122 aaKnown RBP7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 SOX1O00570 391 aaPredicted RBP7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 PEX10O60683 326 aa7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 FARP2O94887 1054 aaPredicted RBP7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 LDHBP07195 334 aaKnown RBP7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 GRK4P32298 578 aa7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 PPATQ06203 517 aa7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 RRP1BQ14684 758 aaKnown RBP7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 SHROOM1Q2M3G4 852 aaPredicted RBP7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 TREML2Q5T2D2 321 aa7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 HHIPL2Q6UWX4 724 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms