RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 CYP8B1Q9UNU6 501 aa5.77□□□□□ -1.49
HMGB1P15-201ENST00000453854 TRIM33Q9UPN9 1127 aa5.77□□□□□ -1.49
HMGB1P15-201ENST00000453854 ROBO2Q9HCK4 1378 aa5.77□□□□□ -1.49
HMGB1P15-201ENST00000453854 FAM221AA4D161 298 aa5.76□□□□□ -1.49
HMGB1P15-201ENST00000453854 NME2P22392 152 aa5.76□□□□□ -1.49
HMGB1P15-201ENST00000453854 FAM160A1Q05DH4 1040 aa5.76□□□□□ -1.49
HMGB1P15-201ENST00000453854 ADGRE1Q14246 886 aa5.76□□□□□ -1.49
HMGB1P15-201ENST00000453854 MBTPS1Q14703 1052 aa5.76□□□□□ -1.49
HMGB1P15-201ENST00000453854 SOGA3Q5TF21 947 aa5.76□□□□□ -1.49
HMGB1P15-201ENST00000453854 RASIP1Q5U651 963 aa5.76□□□□□ -1.49
HMGB1P15-201ENST00000453854 SCARA3Q6AZY7 606 aa5.76□□□□□ -1.49
HMGB1P15-201ENST00000453854 FAM196AQ6ZSG2 479 aa5.76□□□□□ -1.49
HMGB1P15-201ENST00000453854 SLITRK4Q8IW52 837 aa5.76□□□□□ -1.49
HMGB1P15-201ENST00000453854 DMRTC2Q8IXT2 367 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P15-201ENST00000453854 GOLM1Q8NBJ4 401 aa5.76□□□□□ -1.49
HMGB1P15-201ENST00000453854 DNAJC2Q99543 621 aaKnown RBP5.76□□□□□ -1.49
HMGB1P15-201ENST00000453854 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.76□□□□□ -1.49
HMGB1P15-201ENST00000453854 HIRIP3Q9BW71 556 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P15-201ENST00000453854 LNPKQ9C0E8 428 aa5.76□□□□□ -1.49
HMGB1P15-201ENST00000453854 GPN3Q9UHW5 284 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P15-201ENST00000453854 SAMM50Q9Y512 469 aa5.76□□□□□ -1.49
HMGB1P15-201ENST00000453854 DYRK3O43781 588 aa5.75□□□□□ -1.49
HMGB1P15-201ENST00000453854 ELNP15502 786 aa5.75□□□□□ -1.49
HMGB1P15-201ENST00000453854 ARNTP27540 789 aa5.75□□□□□ -1.49
HMGB1P15-201ENST00000453854 CRKP46108 304 aa5.75□□□□□ -1.49
HMGB1P15-201ENST00000453854 ZNF252P-AS1Q0IIN9 211 aa5.75□□□□□ -1.49
HMGB1P15-201ENST00000453854 STK35Q8TDR2 534 aa5.75□□□□□ -1.49
HMGB1P15-201ENST00000453854 GATAD2BQ8WXI9 593 aa5.75□□□□□ -1.49
HMGB1P15-201ENST00000453854 SOX17Q9H6I2 414 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P15-201ENST00000453854 GINM1Q9NU53 330 aa5.75□□□□□ -1.49
HMGB1P15-201ENST00000453854 CACNA2D2Q9NY47 1150 aa5.75□□□□□ -1.49
HMGB1P15-201ENST00000453854 UBP1Q9NZI7 540 aa5.75□□□□□ -1.49
HMGB1P15-201ENST00000453854 STRIP2Q9ULQ0 834 aa5.75□□□□□ -1.49
HMGB1P15-201ENST00000453854 SOX1O00570 391 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P15-201ENST00000453854 RGS9O75916 674 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P15-201ENST00000453854 EPHA1P21709 976 aa5.74□□□□□ -1.49
HMGB1P15-201ENST00000453854 CDC27P30260 824 aa5.74□□□□□ -1.49
HMGB1P15-201ENST00000453854 NASPP49321 788 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P15-201ENST00000453854 ZNF157P51786 506 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P15-201ENST00000453854 LRRC14Q15048 493 aa5.74□□□□□ -1.49
HMGB1P15-201ENST00000453854 SNAP47Q5SQN1 464 aa5.74□□□□□ -1.49
HMGB1P15-201ENST00000453854 ZMYM1Q5SVZ6 1142 aa5.74□□□□□ -1.49
HMGB1P15-201ENST00000453854 PDZD3Q86UT5 571 aa5.74□□□□□ -1.49
HMGB1P15-201ENST00000453854 SULF2Q8IWU5 870 aa5.74□□□□□ -1.49
HMGB1P15-201ENST00000453854 FMR1NBQ8N0W7 255 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P15-201ENST00000453854 LENG1Q96BZ8 264 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P15-201ENST00000453854 NACC1Q96RE7 527 aa5.74□□□□□ -1.49
HMGB1P15-201ENST00000453854 LACRTQ9GZZ8 138 aa5.74□□□□□ -1.49
HMGB1P15-201ENST00000453854 SH2B1Q9NRF2 756 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P15-201ENST00000453854 EFR3BQ9Y2G0 817 aa5.74□□□□□ -1.49
HMGB1P15-201ENST00000453854 PCDHB5Q9Y5E4 795 aa5.74□□□□□ -1.49
HMGB1P15-201ENST00000453854 C9orf172C9J069 976 aa5.73□□□□□ -1.49
HMGB1P15-201ENST00000453854 H3BRJ5 948 aa5.73□□□□□ -1.49
HMGB1P15-201ENST00000453854 CILPO75339 1184 aa5.73□□□□□ -1.49
HMGB1P15-201ENST00000453854 STK10O94804 968 aaKnown RBP5.73□□□□□ -1.49
HMGB1P15-201ENST00000453854 F13A1P00488 732 aa5.73□□□□□ -1.49
HMGB1P15-201ENST00000453854 APOBRQ0VD83 1088 aa5.73□□□□□ -1.49
HMGB1P15-201ENST00000453854 IKBKEQ14164 716 aa5.73□□□□□ -1.49
HMGB1P15-201ENST00000453854 MPP2Q14168 576 aa5.73□□□□□ -1.49
HMGB1P15-201ENST00000453854 NBPF6Q5VWK0 638 aa5.73□□□□□ -1.49
HMGB1P15-201ENST00000453854 BNC2Q6ZN30 1099 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P15-201ENST00000453854 NBPF4Q96M43 638 aa5.73□□□□□ -1.49
HMGB1P15-201ENST00000453854 MIR1-1HGQ9H1L0 117 aa5.73□□□□□ -1.49
HMGB1P15-201ENST00000453854 CADPSQ9ULU8 1353 aa5.72□□□□□ -1.49
HMGB1P15-201ENST00000453854 EIF4EBP3O60516 100 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P15-201ENST00000453854 RAC1P63000 192 aa5.72□□□□□ -1.49
HMGB1P15-201ENST00000453854 CCDC144BQ3MJ40 725 aa5.72□□□□□ -1.49
HMGB1P15-201ENST00000453854 PRSS36Q5K4E3 855 aa5.72□□□□□ -1.49
HMGB1P15-201ENST00000453854 MSL1Q68DK7 614 aa5.72□□□□□ -1.49
HMGB1P15-201ENST00000453854 LLGL2Q6P1M3 1020 aa5.72□□□□□ -1.49
HMGB1P15-201ENST00000453854 NOP9Q86U38 636 aaKnown RBP5.72□□□□□ -1.49
HMGB1P15-201ENST00000453854 TXNRD3Q86VQ6 643 aa5.72□□□□□ -1.49
HMGB1P15-201ENST00000453854 GRIN3AQ8TCU5 1115 aa5.72□□□□□ -1.49
HMGB1P15-201ENST00000453854 DDX54Q8TDD1 881 aaKnown RBP5.72□□□□□ -1.49
HMGB1P15-201ENST00000453854 WNT8BQ93098 351 aa5.72□□□□□ -1.49
HMGB1P15-201ENST00000453854 NKD1Q969G9 470 aa5.72□□□□□ -1.49
HMGB1P15-201ENST00000453854 GAL3ST3Q96A11 431 aa5.72□□□□□ -1.49
HMGB1P15-201ENST00000453854 EMILIN2Q9BXX0 1053 aa5.72□□□□□ -1.49
HMGB1P15-201ENST00000453854 NRSN2Q9GZP1 204 aa5.72□□□□□ -1.49
HMGB1P15-201ENST00000453854 ZNF408Q9H9D4 720 aa5.72□□□□□ -1.49
HMGB1P15-201ENST00000453854 FAM177BA6PVY3 158 aa5.71□□□□□ -1.5
HMGB1P15-201ENST00000453854 TM4SF5O14894 197 aa5.71□□□□□ -1.5
HMGB1P15-201ENST00000453854 DEAF1O75398 565 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P15-201ENST00000453854 CABP4P57796 275 aa5.71□□□□□ -1.5
HMGB1P15-201ENST00000453854 PIP4K2BP78356 416 aa5.71□□□□□ -1.5
HMGB1P15-201ENST00000453854 NRG1Q02297 640 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P15-201ENST00000453854 AP3B2Q13367 1082 aa5.71□□□□□ -1.5
HMGB1P15-201ENST00000453854 GDF6Q6KF10 455 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P15-201ENST00000453854 GIMAP6Q6P9H5 292 aa5.71□□□□□ -1.5
HMGB1P15-201ENST00000453854 REXO1Q8N1G1 1221 aaKnown RBP5.71□□□□□ -1.5
HMGB1P15-201ENST00000453854 IL22RA1Q8N6P7 574 aa5.71□□□□□ -1.5
HMGB1P15-201ENST00000453854 FBXO27Q8NI29 283 aa5.71□□□□□ -1.5
HMGB1P15-201ENST00000453854 SSBP4Q9BWG4 385 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P15-201ENST00000453854 PPME1Q9Y570 386 aa5.71□□□□□ -1.5
HMGB1P15-201ENST00000453854 TRIM37O94972 964 aa5.7□□□□□ -1.5
HMGB1P15-201ENST00000453854 SSBP05455 408 aaKnown RBP eCLIP5.7□□□□□ -1.5
HMGB1P15-201ENST00000453854 GSTP1P09211 210 aaKnown RBP5.7□□□□□ -1.5
HMGB1P15-201ENST00000453854 ETFBP38117 255 aa5.7□□□□□ -1.5
HMGB1P15-201ENST00000453854 PTPN11Q06124 597 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P15-201ENST00000453854 SERINC3Q13530 473 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms