RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 KLRK1P26718 216 aa10.67□□□□□ -0.7
COL28A1-205ENST00000453441 LMOD1P29536 600 aaPredicted RBP10.67□□□□□ -0.7
COL28A1-205ENST00000453441 GYG1P46976 350 aa10.67□□□□□ -0.7
COL28A1-205ENST00000453441 TIMM10P62072 90 aa10.67□□□□□ -0.7
COL28A1-205ENST00000453441 TSR1Q2NL82 804 aaKnown RBP10.67□□□□□ -0.7
COL28A1-205ENST00000453441 SMC5Q8IY18 1101 aa10.67□□□□□ -0.7
COL28A1-205ENST00000453441 DPF2Q92785 391 aa10.67□□□□□ -0.7
COL28A1-205ENST00000453441 DENND2AQ9ULE3 1009 aa10.67□□□□□ -0.7
COL28A1-205ENST00000453441 SUGT1Q9Y2Z0 365 aa10.67□□□□□ -0.7
COL28A1-205ENST00000453441 WTIPA6NIX2 430 aaPredicted RBP10.66□□□□□ -0.7
COL28A1-205ENST00000453441 IFIT2P09913 472 aaKnown RBP10.66□□□□□ -0.7
COL28A1-205ENST00000453441 ARID4AP29374 1257 aaPredicted RBP10.66□□□□□ -0.7
COL28A1-205ENST00000453441 BCAMP50895 628 aa10.66□□□□□ -0.7
COL28A1-205ENST00000453441 IRX6P78412 446 aaPredicted RBP10.66□□□□□ -0.7
COL28A1-205ENST00000453441 DACT2Q5SW24 774 aa10.66□□□□□ -0.7
COL28A1-205ENST00000453441 CCDC102BQ68D86 513 aa10.66□□□□□ -0.7
COL28A1-205ENST00000453441 TTLL5Q6EMB2 1281 aa10.66□□□□□ -0.7
COL28A1-205ENST00000453441 SMYD5Q6GMV2 418 aa10.66□□□□□ -0.7
COL28A1-205ENST00000453441 RSBN1LQ6PCB5 846 aaPredicted RBP10.66□□□□□ -0.7
COL28A1-205ENST00000453441 AACSQ86V21 672 aa10.66□□□□□ -0.7
COL28A1-205ENST00000453441 ZGPATQ8N5A5 531 aaKnown RBP10.66□□□□□ -0.7
COL28A1-205ENST00000453441 WDR66Q8TBY9 1149 aa10.66□□□□□ -0.7
COL28A1-205ENST00000453441 GPATCH3Q96I76 525 aa10.66□□□□□ -0.7
COL28A1-205ENST00000453441 RABGEF1Q9UJ41 708 aa10.66□□□□□ -0.7
COL28A1-205ENST00000453441 SALL1Q9NSC2 1324 aa10.65□□□□□ -0.7
COL28A1-205ENST00000453441 TESPA1A2RU30 521 aaPredicted RBP10.65□□□□□ -0.7
COL28A1-205ENST00000453441 PSMD14O00487 310 aa10.65□□□□□ -0.7
COL28A1-205ENST00000453441 RAD17O75943 681 aa10.65□□□□□ -0.7
COL28A1-205ENST00000453441 DDNO94850 711 aaPredicted RBP10.65□□□□□ -0.7
COL28A1-205ENST00000453441 VEGFAP15692 232 aaPredicted RBP10.65□□□□□ -0.7
COL28A1-205ENST00000453441 GTF2IP78347 998 aa10.65□□□□□ -0.7
COL28A1-205ENST00000453441 TMED8Q6PL24 325 aaPredicted RBP10.65□□□□□ -0.7
COL28A1-205ENST00000453441 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.65□□□□□ -0.7
COL28A1-205ENST00000453441 EAF2Q96CJ1 260 aaPredicted RBP10.65□□□□□ -0.7
COL28A1-205ENST00000453441 NBPF3Q9H094 633 aa10.65□□□□□ -0.7
COL28A1-205ENST00000453441 GPBP1L1Q9HC44 474 aaPredicted RBP10.65□□□□□ -0.7
COL28A1-205ENST00000453441 HACL1Q9UJ83 578 aa10.65□□□□□ -0.7
COL28A1-205ENST00000453441 DBNLQ9UJU6 430 aaKnown RBP10.65□□□□□ -0.7
COL28A1-205ENST00000453441 GJA3Q9Y6H8 435 aa10.65□□□□□ -0.7
COL28A1-205ENST00000453441 MAST3O60307 1309 aa10.64□□□□□ -0.71
COL28A1-205ENST00000453441 ZNF646O15015 1829 aaPredicted RBP10.64□□□□□ -0.71
COL28A1-205ENST00000453441 H7C1D1 291 aa10.64□□□□□ -0.71
COL28A1-205ENST00000453441 APBB1O00213 710 aa10.64□□□□□ -0.71
COL28A1-205ENST00000453441 ADORA1P30542 326 aa10.64□□□□□ -0.71
COL28A1-205ENST00000453441 PHKA1P46020 1223 aa10.64□□□□□ -0.71
COL28A1-205ENST00000453441 GMPSP49915 693 aaPredicted RBP10.64□□□□□ -0.71
COL28A1-205ENST00000453441 PROX2Q3B8N5 592 aa10.64□□□□□ -0.71
COL28A1-205ENST00000453441 TTC39AQ5SRH9 613 aa10.64□□□□□ -0.71
COL28A1-205ENST00000453441 PNMA8AQ86V59 439 aaPredicted RBP10.64□□□□□ -0.71
COL28A1-205ENST00000453441 OGFOD1Q8N543 542 aa10.64□□□□□ -0.71
COL28A1-205ENST00000453441 DBNDD2Q9BQY9 259 aa10.64□□□□□ -0.71
COL28A1-205ENST00000453441 IL1RAPL2Q9NP60 686 aa10.64□□□□□ -0.71
COL28A1-205ENST00000453441 GPRC5DQ9NZD1 345 aa10.64□□□□□ -0.71
COL28A1-205ENST00000453441 HDAC9Q9UKV0 1011 aa10.64□□□□□ -0.71
COL28A1-205ENST00000453441 TRIM6-TRIM34B2RNG4 842 aa10.63□□□□□ -0.71
COL28A1-205ENST00000453441 USP17L8P0C7I0 530 aa10.63□□□□□ -0.71
COL28A1-205ENST00000453441 MFSD14BQ5SR56 506 aa10.63□□□□□ -0.71
COL28A1-205ENST00000453441 SPTY2D1Q68D10 685 aaPredicted RBP10.63□□□□□ -0.71
COL28A1-205ENST00000453441 SPATA5Q8NB90 893 aa10.63□□□□□ -0.71
COL28A1-205ENST00000453441 GMLQ99445 158 aa10.63□□□□□ -0.71
COL28A1-205ENST00000453441 CCDC8Q9H0W5 538 aaPredicted RBP10.63□□□□□ -0.71
COL28A1-205ENST00000453441 ADARB2Q9NS39 739 aaKnown RBP10.63□□□□□ -0.71
COL28A1-205ENST00000453441 TTC41PQ6P2S7 1318 aa10.62□□□□□ -0.71
COL28A1-205ENST00000453441 SCNN1DP51172 638 aa10.62□□□□□ -0.71
COL28A1-205ENST00000453441 ZNF280AP59817 542 aaPredicted RBP10.62□□□□□ -0.71
COL28A1-205ENST00000453441 HDLBPQ00341 1268 aaKnown RBP10.62□□□□□ -0.71
COL28A1-205ENST00000453441 RASGRF1Q13972 1273 aa10.62□□□□□ -0.71
COL28A1-205ENST00000453441 ANKRD45Q5TZF3 282 aa10.62□□□□□ -0.71
COL28A1-205ENST00000453441 USP50Q70EL3 339 aaPredicted RBP10.62□□□□□ -0.71
COL28A1-205ENST00000453441 CENPQQ7L2Z9 268 aaPredicted RBP10.62□□□□□ -0.71
COL28A1-205ENST00000453441 ZNF784Q8NCA9 323 aaPredicted RBP10.62□□□□□ -0.71
COL28A1-205ENST00000453441 MRIQ9BWK5 157 aa10.62□□□□□ -0.71
COL28A1-205ENST00000453441 CNOT7Q9UIV1 285 aaKnown RBP10.62□□□□□ -0.71
COL28A1-205ENST00000453441 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.62□□□□□ -0.71
COL28A1-205ENST00000453441 ERC2O15083 957 aa10.61□□□□□ -0.71
COL28A1-205ENST00000453441 IGHDP01880 384 aa10.61□□□□□ -0.71
COL28A1-205ENST00000453441 ATP5JP18859 108 aa10.61□□□□□ -0.71
COL28A1-205ENST00000453441 EPHX2P34913 555 aa10.61□□□□□ -0.71
COL28A1-205ENST00000453441 PRSS12P56730 875 aa10.61□□□□□ -0.71
COL28A1-205ENST00000453441 NUCB1Q02818 461 aa10.61□□□□□ -0.71
COL28A1-205ENST00000453441 CHAF1AQ13111 956 aaPredicted RBP10.61□□□□□ -0.71
COL28A1-205ENST00000453441 TTF1Q15361 905 aaPredicted RBP10.61□□□□□ -0.71
COL28A1-205ENST00000453441 CHD1LQ86WJ1 897 aa10.61□□□□□ -0.71
COL28A1-205ENST00000453441 SLF2Q8IX21 1173 aa10.61□□□□□ -0.71
COL28A1-205ENST00000453441 TAF1DQ9H5J8 278 aaPredicted RBP10.61□□□□□ -0.71
COL28A1-205ENST00000453441 KCNQ5Q9NR82 932 aa10.61□□□□□ -0.71
COL28A1-205ENST00000453441 ECHDC1Q9NTX5 307 aa10.61□□□□□ -0.71
COL28A1-205ENST00000453441 TLR7Q9NYK1 1049 aaKnown RBP10.61□□□□□ -0.71
COL28A1-205ENST00000453441 HMG20BQ9P0W2 317 aa10.61□□□□□ -0.71
COL28A1-205ENST00000453441 RBM27Q9P2N5 1060 aaKnown RBP10.61□□□□□ -0.71
COL28A1-205ENST00000453441 COL1A1P02452 1464 aaPredicted RBP10.61□□□□□ -0.71
COL28A1-205ENST00000453441 AOX1Q06278 1338 aa10.6□□□□□ -0.71
COL28A1-205ENST00000453441 AKAP11Q9UKA4 1901 aa10.6□□□□□ -0.71
COL28A1-205ENST00000453441 MCAMP43121 646 aa10.6□□□□□ -0.71
COL28A1-205ENST00000453441 PACS2Q86VP3 889 aa10.6□□□□□ -0.71
COL28A1-205ENST00000453441 C16orf71Q8IYS4 520 aaPredicted RBP10.6□□□□□ -0.71
COL28A1-205ENST00000453441 MTMR14Q8NCE2 650 aa10.6□□□□□ -0.71
COL28A1-205ENST00000453441 ZC3H15Q8WU90 426 aaKnown RBP10.6□□□□□ -0.71
COL28A1-205ENST00000453441 RRAGCQ9HB90 399 aa10.6□□□□□ -0.71
COL28A1-205ENST00000453441 KIAA1468Q9P260 1216 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms