RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 POLR3GO15318 223 aaPredicted RBP12.88□□□□□ -0.35
DDR1-239ENST00000452441 PDE8AO60658 829 aa12.88□□□□□ -0.35
DDR1-239ENST00000452441 GIGYF2Q6Y7W6 1299 aaKnown RBP12.88□□□□□ -0.35
DDR1-239ENST00000452441 USP5P45974 858 aa12.88□□□□□ -0.35
DDR1-239ENST00000452441 PNOCQ13519 176 aa12.88□□□□□ -0.35
DDR1-239ENST00000452441 DPCR1Q3MIW9 517 aa12.88□□□□□ -0.35
DDR1-239ENST00000452441 MEGF6O75095 1541 aa12.87□□□□□ -0.35
DDR1-239ENST00000452441 RIMBP2O15034 1052 aa12.87□□□□□ -0.35
DDR1-239ENST00000452441 UBASH3AP57075 661 aa12.87□□□□□ -0.35
DDR1-239ENST00000452441 CCDC102BQ68D86 513 aa12.87□□□□□ -0.35
DDR1-239ENST00000452441 APPBP2Q92624 585 aa12.87□□□□□ -0.35
DDR1-239ENST00000452441 SETDB2Q96T68 719 aa12.87□□□□□ -0.35
DDR1-239ENST00000452441 CDC5LQ99459 802 aaKnown RBP12.87□□□□□ -0.35
DDR1-239ENST00000452441 HELLSQ9NRZ9 838 aa12.87□□□□□ -0.35
DDR1-239ENST00000452441 CCDC87Q9NVE4 849 aa12.87□□□□□ -0.35
DDR1-239ENST00000452441 STX8Q9UNK0 236 aa12.87□□□□□ -0.35
DDR1-239ENST00000452441 NLRP10Q86W26 655 aa12.87□□□□□ -0.35
DDR1-239ENST00000452441 GRAMD1CQ8IYS0 662 aa12.87□□□□□ -0.35
DDR1-239ENST00000452441 GOLPH3LQ9H4A5 285 aa12.87□□□□□ -0.35
DDR1-239ENST00000452441 ELP1O95163 1332 aa12.87□□□□□ -0.35
DDR1-239ENST00000452441 MAP3K15Q6ZN16 1313 aa12.87□□□□□ -0.35
DDR1-239ENST00000452441 ZNF202O95125 648 aa12.87□□□□□ -0.35
DDR1-239ENST00000452441 ZFYP08048 801 aaPredicted RBP12.87□□□□□ -0.35
DDR1-239ENST00000452441 GTF2F1P35269 517 aaKnown RBP eCLIP12.87□□□□□ -0.35
DDR1-239ENST00000452441 SSRP1Q08945 709 aaKnown RBP12.87□□□□□ -0.35
DDR1-239ENST00000452441 TTF1Q15361 905 aaPredicted RBP12.87□□□□□ -0.35
DDR1-239ENST00000452441 CCDC144BQ3MJ40 725 aa12.87□□□□□ -0.35
DDR1-239ENST00000452441 AMOTL1Q8IY63 956 aa12.87□□□□□ -0.35
DDR1-239ENST00000452441 KCNB2Q92953 911 aa12.87□□□□□ -0.35
DDR1-239ENST00000452441 DHX58Q96C10 678 aa12.87□□□□□ -0.35
DDR1-239ENST00000452441 TNS3Q68CZ2 1445 aa12.86□□□□□ -0.35
DDR1-239ENST00000452441 LOC102724428A0A0B4J2F2 783 aa12.86□□□□□ -0.35
DDR1-239ENST00000452441 CRKLP46109 303 aaKnown RBP12.86□□□□□ -0.35
DDR1-239ENST00000452441 SIK1P57059 783 aa12.86□□□□□ -0.35
DDR1-239ENST00000452441 FOXO4P98177 505 aa12.86□□□□□ -0.35
DDR1-239ENST00000452441 KARSQ15046 597 aaKnown RBP12.86□□□□□ -0.35
DDR1-239ENST00000452441 AK7Q96M32 723 aa12.86□□□□□ -0.35
DDR1-239ENST00000452441 CABP5Q9NP86 173 aa12.86□□□□□ -0.35
DDR1-239ENST00000452441 LMO7Q8WWI1 1683 aa12.86□□□□□ -0.35
DDR1-239ENST00000452441 BAZ2BQ9UIF8 2168 aaKnown RBP12.86□□□□□ -0.35
DDR1-239ENST00000452441 CHD2O14647 1828 aaKnown RBP12.86□□□□□ -0.35
DDR1-239ENST00000452441 CYP2D7A0A087X1C5 515 aa12.86□□□□□ -0.35
DDR1-239ENST00000452441 GOLGB1Q14789 3259 aaKnown RBP12.86□□□□□ -0.35
DDR1-239ENST00000452441 TOM1O60784 492 aa12.86□□□□□ -0.35
DDR1-239ENST00000452441 PCCAP05165 728 aaPredicted RBP12.86□□□□□ -0.35
DDR1-239ENST00000452441 TOP1P11387 765 aaKnown RBP12.86□□□□□ -0.35
DDR1-239ENST00000452441 FAM160A1Q05DH4 1040 aa12.86□□□□□ -0.35
DDR1-239ENST00000452441 GPR101Q96P66 508 aaPredicted RBP12.86□□□□□ -0.35
DDR1-239ENST00000452441 XPO4Q9C0E2 1151 aaKnown RBP12.86□□□□□ -0.35
DDR1-239ENST00000452441 SENP2Q9HC62 589 aa12.86□□□□□ -0.35
DDR1-239ENST00000452441 USP27XA6NNY8 438 aa12.85□□□□□ -0.35
DDR1-239ENST00000452441 UQCRFS1P1P0C7P4 283 aa12.85□□□□□ -0.35
DDR1-239ENST00000452441 MKNK2Q9HBH9 465 aa12.85□□□□□ -0.35
DDR1-239ENST00000452441 PRDM4Q9UKN5 801 aa12.85□□□□□ -0.35
DDR1-239ENST00000452441 BTBD18B2RXH4 712 aa12.85□□□□□ -0.35
DDR1-239ENST00000452441 SNW1Q13573 536 aaKnown RBP12.85□□□□□ -0.35
DDR1-239ENST00000452441 JMYQ8N9B5 988 aa12.85□□□□□ -0.35
DDR1-239ENST00000452441 TTLL11Q8NHH1 800 aa12.85□□□□□ -0.35
DDR1-239ENST00000452441 CRYBG1Q9Y4K1 1723 aa12.85□□□□□ -0.35
DDR1-239ENST00000452441 ATP1A3P13637 1013 aa12.85□□□□□ -0.35
DDR1-239ENST00000452441 PDIA4P13667 645 aaKnown RBP12.85□□□□□ -0.35
DDR1-239ENST00000452441 CASP1P29466 404 aa12.85□□□□□ -0.35
DDR1-239ENST00000452441 DNA2P51530 1060 aa12.85□□□□□ -0.35
DDR1-239ENST00000452441 TEX35Q5T0J7 233 aa12.85□□□□□ -0.35
DDR1-239ENST00000452441 KIF18AQ8NI77 898 aa12.85□□□□□ -0.35
DDR1-239ENST00000452441 NLRP3Q96P20 1036 aa12.85□□□□□ -0.35
DDR1-239ENST00000452441 SRP68Q9UHB9 627 aaKnown RBP12.85□□□□□ -0.35
DDR1-239ENST00000452441 CDKL5O76039 1030 aa12.84□□□□□ -0.35
DDR1-239ENST00000452441 WTAPQ15007 396 aa12.84□□□□□ -0.35
DDR1-239ENST00000452441 PUM3Q15397 648 aaKnown RBP12.84□□□□□ -0.35
DDR1-239ENST00000452441 KRT40Q6A162 431 aa12.84□□□□□ -0.35
DDR1-239ENST00000452441 ATG9AQ7Z3C6 839 aa12.84□□□□□ -0.35
DDR1-239ENST00000452441 LONRF3Q496Y0 759 aa12.84□□□□□ -0.35
DDR1-239ENST00000452441 SUSD4Q5VX71 490 aa12.84□□□□□ -0.35
DDR1-239ENST00000452441 RGPD5Q99666 1765 aa12.84□□□□□ -0.35
DDR1-239ENST00000452441 A0A0U1RQG5 324 aaPredicted RBP12.84□□□□□ -0.35
DDR1-239ENST00000452441 POLR2DO15514 142 aaKnown RBP12.84□□□□□ -0.35
DDR1-239ENST00000452441 PDE6AP16499 860 aa12.84□□□□□ -0.35
DDR1-239ENST00000452441 RESTQ13127 1097 aa12.84□□□□□ -0.35
DDR1-239ENST00000452441 PICALMQ13492 652 aa12.84□□□□□ -0.35
DDR1-239ENST00000452441 ENOX2Q16206 610 aaKnown RBP12.84□□□□□ -0.35
DDR1-239ENST00000452441 NAA16Q6N069 864 aaPredicted RBP12.84□□□□□ -0.35
DDR1-239ENST00000452441 SPATA5Q8NB90 893 aa12.84□□□□□ -0.35
DDR1-239ENST00000452441 ZNF622Q969S3 477 aaKnown RBP eCLIP12.84□□□□□ -0.35
DDR1-239ENST00000452441 HINFPQ9BQA5 517 aa12.84□□□□□ -0.35
DDR1-239ENST00000452441 TRIM34Q9BYJ4 488 aa12.84□□□□□ -0.35
DDR1-239ENST00000452441 KDM6AO15550 1401 aaPredicted RBP12.83□□□□□ -0.36
DDR1-239ENST00000452441 MPHOSPH10O00566 681 aaKnown RBP12.83□□□□□ -0.36
DDR1-239ENST00000452441 XBP1P17861 261 aa12.83□□□□□ -0.36
DDR1-239ENST00000452441 CDC25AP30304 524 aa12.83□□□□□ -0.36
DDR1-239ENST00000452441 PPARDQ03181 441 aa12.83□□□□□ -0.36
DDR1-239ENST00000452441 ANO1Q5XXA6 986 aa12.83□□□□□ -0.36
DDR1-239ENST00000452441 PDE8BO95263 885 aa12.83□□□□□ -0.36
DDR1-239ENST00000452441 MCAMP43121 646 aa12.83□□□□□ -0.36
DDR1-239ENST00000452441 ZNF174Q15697 407 aa12.83□□□□□ -0.36
DDR1-239ENST00000452441 ZMYM1Q5SVZ6 1142 aa12.83□□□□□ -0.36
DDR1-239ENST00000452441 LZTFL1Q9NQ48 299 aa12.83□□□□□ -0.36
DDR1-239ENST00000452441 CCNL1Q9UK58 526 aaPredicted RBP12.83□□□□□ -0.36
DDR1-239ENST00000452441 COL15A1P39059 1388 aa12.83□□□□□ -0.36
DDR1-239ENST00000452441 TSPY2A6NKD2 308 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms