RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 SCAF8Q9UPN6 1271 aaKnown RBP14.67□□□□□ -0.06
SMPD4-212ENST00000451542 MROH7-TTC4A0A0A0MT08 1334 aa14.66□□□□□ -0.06
SMPD4-212ENST00000451542 GAKO14976 1311 aa14.66□□□□□ -0.06
SMPD4-212ENST00000451542 PAPPA2Q9BXP8 1791 aa14.66□□□□□ -0.06
SMPD4-212ENST00000451542 PLCG2P16885 1265 aa14.66□□□□□ -0.06
SMPD4-212ENST00000451542 ZAP70P43403 619 aa14.66□□□□□ -0.06
SMPD4-212ENST00000451542 IREB2P48200 963 aaKnown RBP14.66□□□□□ -0.06
SMPD4-212ENST00000451542 VEGFBP49765 207 aa14.66□□□□□ -0.06
SMPD4-212ENST00000451542 HDAC1Q13547 482 aaPredicted RBP14.66□□□□□ -0.06
SMPD4-212ENST00000451542 PRAMEF18Q5VWM3 479 aa14.66□□□□□ -0.06
SMPD4-212ENST00000451542 DLK2Q6UY11 383 aa14.66□□□□□ -0.06
SMPD4-212ENST00000451542 CERS3Q8IU89 383 aa14.66□□□□□ -0.06
SMPD4-212ENST00000451542 JMYQ8N9B5 988 aa14.66□□□□□ -0.06
SMPD4-212ENST00000451542 NSUN4Q96CB9 384 aaKnown RBP14.66□□□□□ -0.06
SMPD4-212ENST00000451542 WDR33Q9C0J8 1336 aaKnown RBP14.66□□□□□ -0.06
SMPD4-212ENST00000451542 AKAP11Q9UKA4 1901 aa14.65□□□□□ -0.06
SMPD4-212ENST00000451542 UNCXA6NJT0 531 aa14.65□□□□□ -0.06
SMPD4-212ENST00000451542 IDH1O75874 414 aaKnown RBP14.65□□□□□ -0.06
SMPD4-212ENST00000451542 CYP2E1P05181 493 aaPredicted RBP14.65□□□□□ -0.06
SMPD4-212ENST00000451542 MAP2K2P36507 400 aa14.65□□□□□ -0.06
SMPD4-212ENST00000451542 BTDP43251 543 aa14.65□□□□□ -0.06
SMPD4-212ENST00000451542 ZNF157P51786 506 aaPredicted RBP14.65□□□□□ -0.06
SMPD4-212ENST00000451542 NOGQ13253 232 aa14.65□□□□□ -0.06
SMPD4-212ENST00000451542 CDC42EP5Q6NZY7 148 aa14.65□□□□□ -0.06
SMPD4-212ENST00000451542 BEGAINQ9BUH8 593 aa14.65□□□□□ -0.06
SMPD4-212ENST00000451542 ANGEL1Q9UNK9 670 aaKnown RBP14.65□□□□□ -0.06
SMPD4-212ENST00000451542 GPR75-ASB3A0A0A6YYF3 556 aa14.64□□□□□ -0.07
SMPD4-212ENST00000451542 ATP5JP18859 108 aa14.64□□□□□ -0.07
SMPD4-212ENST00000451542 MAP2K1Q02750 393 aaPredicted RBP14.64□□□□□ -0.07
SMPD4-212ENST00000451542 DCAF15Q66K64 600 aa14.64□□□□□ -0.07
SMPD4-212ENST00000451542 CYP4F22Q6NT55 531 aa14.64□□□□□ -0.07
SMPD4-212ENST00000451542 FAM151AQ8WW52 585 aa14.64□□□□□ -0.07
SMPD4-212ENST00000451542 ECHDC1Q9NTX5 307 aa14.64□□□□□ -0.07
SMPD4-212ENST00000451542 AK9Q5TCS8 1911 aa14.64□□□□□ -0.07
SMPD4-212ENST00000451542 ERC2O15083 957 aa14.63□□□□□ -0.07
SMPD4-212ENST00000451542 ENTPD3O75355 529 aa14.63□□□□□ -0.07
SMPD4-212ENST00000451542 CACNB3P54284 484 aa14.63□□□□□ -0.07
SMPD4-212ENST00000451542 PRKG1Q13976 671 aa14.63□□□□□ -0.07
SMPD4-212ENST00000451542 NBPF12Q5TAG4 269 aaPredicted RBP14.63□□□□□ -0.07
SMPD4-212ENST00000451542 REM2Q8IYK8 340 aaPredicted RBP14.63□□□□□ -0.07
SMPD4-212ENST00000451542 EXOC6Q8TAG9 804 aa14.63□□□□□ -0.07
SMPD4-212ENST00000451542 AIDAQ96BJ3 306 aa14.63□□□□□ -0.07
SMPD4-212ENST00000451542 DNAJC2Q99543 621 aaKnown RBP14.63□□□□□ -0.07
SMPD4-212ENST00000451542 IDI2Q9BXS1 227 aa14.63□□□□□ -0.07
SMPD4-212ENST00000451542 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.63□□□□□ -0.071e-6■■■■□ 21.2
SMPD4-212ENST00000451542 TMEM39BQ9GZU3 492 aa14.63□□□□□ -0.07
SMPD4-212ENST00000451542 AOX1Q06278 1338 aa14.63□□□□□ -0.07
SMPD4-212ENST00000451542 RPAP1Q9BWH6 1393 aaPredicted RBP14.62□□□□□ -0.07
SMPD4-212ENST00000451542 UBE2Q2LH0YL09 131 aa14.62□□□□□ -0.07
SMPD4-212ENST00000451542 SMARCA5O60264 1052 aaPredicted RBP14.62□□□□□ -0.07
SMPD4-212ENST00000451542 NPM3O75607 178 aaKnown RBP14.62□□□□□ -0.07
SMPD4-212ENST00000451542 CYP7A1P22680 504 aa14.62□□□□□ -0.07
SMPD4-212ENST00000451542 TCP10Q12799 353 aa14.62□□□□□ -0.07
SMPD4-212ENST00000451542 MAP3K11Q16584 847 aa14.62□□□□□ -0.07
SMPD4-212ENST00000451542 ANKRD45Q5TZF3 282 aa14.62□□□□□ -0.07
SMPD4-212ENST00000451542 ZSCAN29Q8IWY8 852 aaPredicted RBP14.62□□□□□ -0.07
SMPD4-212ENST00000451542 ANKRD13AQ8IZ07 590 aa14.62□□□□□ -0.07
SMPD4-212ENST00000451542 BOLA2Q9H3K6 86 aa14.62□□□□□ -0.07
SMPD4-212ENST00000451542 PIH1D3Q9NQM4 214 aaKnown RBP14.62□□□□□ -0.07
SMPD4-212ENST00000451542 GOLIM4O00461 696 aa14.61□□□□□ -0.07
SMPD4-212ENST00000451542 LRRFIP1Q32MZ4 808 aaKnown RBP14.61□□□□□ -0.07
SMPD4-212ENST00000451542 ZSCAN25Q6NSZ9 544 aa14.61□□□□□ -0.07
SMPD4-212ENST00000451542 SLC10A4Q96EP9 437 aa14.61□□□□□ -0.07
SMPD4-212ENST00000451542 PAG1Q9NWQ8 432 aa14.61□□□□□ -0.07
SMPD4-212ENST00000451542 TTC41PQ6P2S7 1318 aa14.61□□□□□ -0.07
SMPD4-212ENST00000451542 MAST2Q6P0Q8 1798 aa14.6□□□□□ -0.07
SMPD4-212ENST00000451542 RGS3P49796 1198 aa14.6□□□□□ -0.07
SMPD4-212ENST00000451542 PPP4CP60510 307 aa14.6□□□□□ -0.07
SMPD4-212ENST00000451542 TEX11Q8IYF3 940 aa14.6□□□□□ -0.07
SMPD4-212ENST00000451542 MAGEB6Q8N7X4 407 aa14.6□□□□□ -0.07
SMPD4-212ENST00000451542 TEPSINQ96N21 525 aa14.6□□□□□ -0.07
SMPD4-212ENST00000451542 HAUS7Q99871 368 aa14.6□□□□□ -0.07
SMPD4-212ENST00000451542 ZNF341Q9BYN7 854 aa14.6□□□□□ -0.07
SMPD4-212ENST00000451542 AATFQ9NY61 560 aaKnown RBP eCLIP14.6□□□□□ -0.07
SMPD4-212ENST00000451542 CSADQ9Y600 493 aa14.6□□□□□ -0.07
SMPD4-212ENST00000451542 USP2O75604 605 aaPredicted RBP14.59□□□□□ -0.07
SMPD4-212ENST00000451542 SLC10A3P09131 477 aa14.59□□□□□ -0.07
SMPD4-212ENST00000451542 MAP3K9P80192 1104 aa14.59□□□□□ -0.07
SMPD4-212ENST00000451542 NFIAQ12857 509 aa14.59□□□□□ -0.07
SMPD4-212ENST00000451542 PICALMQ13492 652 aa14.59□□□□□ -0.07
SMPD4-212ENST00000451542 LDLRAD1Q5T700 205 aa14.59□□□□□ -0.07
SMPD4-212ENST00000451542 SLC9C2Q5TAH2 1124 aa14.59□□□□□ -0.07
SMPD4-212ENST00000451542 MOB2Q70IA6 237 aa14.59□□□□□ -0.07
SMPD4-212ENST00000451542 ANTXR1Q9H6X2 564 aa14.59□□□□□ -0.07
SMPD4-212ENST00000451542 CA12O43570 354 aa14.58□□□□□ -0.08
SMPD4-212ENST00000451542 GLRX3O76003 335 aaKnown RBP14.58□□□□□ -0.08
SMPD4-212ENST00000451542 RHBDL3P58872 404 aa14.58□□□□□ -0.08
SMPD4-212ENST00000451542 ZNF384Q8TF68 577 aa14.58□□□□□ -0.08
SMPD4-212ENST00000451542 CSRNP1Q96S65 589 aa14.58□□□□□ -0.08
SMPD4-212ENST00000451542 FAM198AQ9UFP1 575 aa14.58□□□□□ -0.08
SMPD4-212ENST00000451542 NDUFB9Q9Y6M9 179 aa14.58□□□□□ -0.08
SMPD4-212ENST00000451542 WDHD1O75717 1129 aaPredicted RBP14.57□□□□□ -0.08
SMPD4-212ENST00000451542 HSPA1AP0DMV8 641 aaKnown RBP14.57□□□□□ -0.08
SMPD4-212ENST00000451542 HSPA1BP0DMV9 641 aaKnown RBP14.57□□□□□ -0.08
SMPD4-212ENST00000451542 MX1P20591 662 aa14.57□□□□□ -0.08
SMPD4-212ENST00000451542 RASAL3Q86YV0 1011 aa14.57□□□□□ -0.08
SMPD4-212ENST00000451542 SMC5Q8IY18 1101 aa14.57□□□□□ -0.08
SMPD4-212ENST00000451542 DHX36Q9H2U1 1008 aaKnown RBP14.57□□□□□ -0.08
SMPD4-212ENST00000451542 MYO5AQ9Y4I1 1855 aaKnown RBP14.57□□□□□ -0.08
SMPD4-212ENST00000451542 MAGEB6P1A0A0J9YX57 407 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms