RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 AK9Q5TCS8 1911 aa12.76□□□□□ -0.37
LINC01004-202ENST00000450686 TESPA1A2RU30 521 aaPredicted RBP12.76□□□□□ -0.37
LINC01004-202ENST00000450686 GABBR2O75899 941 aa12.76□□□□□ -0.37
LINC01004-202ENST00000450686 PDE8BO95263 885 aa12.76□□□□□ -0.37
LINC01004-202ENST00000450686 EN2P19622 333 aaPredicted RBP12.76□□□□□ -0.37
LINC01004-202ENST00000450686 MAP3K9P80192 1104 aa12.76□□□□□ -0.37
LINC01004-202ENST00000450686 SP3Q02447 781 aa12.76□□□□□ -0.37
LINC01004-202ENST00000450686 TAF1CQ15572 869 aaPredicted RBP12.76□□□□□ -0.37
LINC01004-202ENST00000450686 MIGA2Q7L4E1 593 aa12.76□□□□□ -0.37
LINC01004-202ENST00000450686 TEKT1Q969V4 418 aa12.76□□□□□ -0.37
LINC01004-202ENST00000450686 CDCA7LQ96GN5 454 aa12.76□□□□□ -0.37
LINC01004-202ENST00000450686 ERO1AQ96HE7 468 aa12.76□□□□□ -0.37
LINC01004-202ENST00000450686 USP44Q9H0E7 712 aa12.76□□□□□ -0.37
LINC01004-202ENST00000450686 SIL1Q9H173 461 aa12.76□□□□□ -0.37
LINC01004-202ENST00000450686 EFCC1Q9HA90 598 aa12.76□□□□□ -0.37
LINC01004-202ENST00000450686 SNCAIPQ9Y6H5 919 aa12.76□□□□□ -0.37
LINC01004-202ENST00000450686 RBBP6Q7Z6E9 1792 aaKnown RBP12.76□□□□□ -0.37
LINC01004-202ENST00000450686 RFX5P48382 616 aaPredicted RBP12.75□□□□□ -0.37
LINC01004-202ENST00000450686 DIXDC1Q155Q3 683 aa12.75□□□□□ -0.37
LINC01004-202ENST00000450686 CAVIN4Q5BKX8 364 aa12.75□□□□□ -0.37
LINC01004-202ENST00000450686 APOBEC3HQ6NTF7 200 aaKnown RBP12.75□□□□□ -0.37
LINC01004-202ENST00000450686 WRNIP1Q96S55 665 aa12.75□□□□□ -0.37
LINC01004-202ENST00000450686 PTCH2Q9Y6C5 1203 aa12.75□□□□□ -0.37
LINC01004-202ENST00000450686 CHRM1P11229 460 aaPredicted RBP12.74□□□□□ -0.37
LINC01004-202ENST00000450686 FGFR2P21802 821 aa12.74□□□□□ -0.37
LINC01004-202ENST00000450686 TNNI2P48788 182 aa12.74□□□□□ -0.37
LINC01004-202ENST00000450686 TCP10Q12799 353 aa12.74□□□□□ -0.37
LINC01004-202ENST00000450686 OTUD7BQ6GQQ9 843 aa12.74□□□□□ -0.37
LINC01004-202ENST00000450686 CSADQ9Y600 493 aa12.74□□□□□ -0.37
LINC01004-202ENST00000450686 SPDYE5A6NIY4 337 aa12.73□□□□□ -0.37
LINC01004-202ENST00000450686 IRF6O14896 467 aa12.73□□□□□ -0.37
LINC01004-202ENST00000450686 SLURP2P0DP57 97 aa12.73□□□□□ -0.37
LINC01004-202ENST00000450686 INPP5BP32019 993 aa12.73□□□□□ -0.37
LINC01004-202ENST00000450686 NFIAQ12857 509 aa12.73□□□□□ -0.37
LINC01004-202ENST00000450686 PUM3Q15397 648 aaKnown RBP12.73□□□□□ -0.37
LINC01004-202ENST00000450686 ATG9AQ7Z3C6 839 aa12.73□□□□□ -0.37
LINC01004-202ENST00000450686 ZDHHC15Q96MV8 337 aa12.73□□□□□ -0.37
LINC01004-202ENST00000450686 PTPRCP08575 1304 aa12.72□□□□□ -0.37
LINC01004-202ENST00000450686 UNCXA6NJT0 531 aa12.72□□□□□ -0.37
LINC01004-202ENST00000450686 BTBD19C9JJ37 291 aa12.72□□□□□ -0.37
LINC01004-202ENST00000450686 EYA2O00167 538 aa12.72□□□□□ -0.37
LINC01004-202ENST00000450686 PYGBP11216 843 aa12.72□□□□□ -0.37
LINC01004-202ENST00000450686 PRDX5P30044 214 aa12.72□□□□□ -0.37
LINC01004-202ENST00000450686 GTF2A2P52657 109 aa12.72□□□□□ -0.37
LINC01004-202ENST00000450686 LHX8Q68G74 356 aa12.72□□□□□ -0.37
LINC01004-202ENST00000450686 ZFPM1Q8IX07 1006 aa12.72□□□□□ -0.37
LINC01004-202ENST00000450686 SH3TC2Q8TF17 1288 aa12.72□□□□□ -0.37
LINC01004-202ENST00000450686 TBC1D22AQ8WUA7 517 aa12.72□□□□□ -0.37
LINC01004-202ENST00000450686 ARMC5Q96C12 935 aa12.72□□□□□ -0.37
LINC01004-202ENST00000450686 ZFYVE28Q9HCC9 887 aa12.72□□□□□ -0.37
LINC01004-202ENST00000450686 TMOD2Q9NZR1 351 aa12.72□□□□□ -0.37
LINC01004-202ENST00000450686 PA2G4Q9UQ80 394 aaKnown RBP12.72□□□□□ -0.37
LINC01004-202ENST00000450686 MAP3K13O43283 966 aa12.71□□□□□ -0.37
LINC01004-202ENST00000450686 IFIT1P09914 478 aaKnown RBP12.71□□□□□ -0.37
LINC01004-202ENST00000450686 SLC5A1P13866 664 aa12.71□□□□□ -0.37
LINC01004-202ENST00000450686 CTGFP29279 349 aa12.71□□□□□ -0.37
LINC01004-202ENST00000450686 ADORA1P30542 326 aa12.71□□□□□ -0.37
LINC01004-202ENST00000450686 SLFN5Q08AF3 891 aa12.71□□□□□ -0.37
LINC01004-202ENST00000450686 CDC42EP5Q6NZY7 148 aa12.71□□□□□ -0.37
LINC01004-202ENST00000450686 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.71□□□□□ -0.37
LINC01004-202ENST00000450686 SMC4Q9NTJ3 1288 aa12.71□□□□□ -0.37
LINC01004-202ENST00000450686 DAGLAQ9Y4D2 1042 aa12.71□□□□□ -0.37
LINC01004-202ENST00000450686 MYH2Q9UKX2 1941 aa12.7□□□□□ -0.38
LINC01004-202ENST00000450686 E9PSI1 815 aa12.7□□□□□ -0.38
LINC01004-202ENST00000450686 PHKA1P46020 1223 aa12.7□□□□□ -0.38
LINC01004-202ENST00000450686 HDLBPQ00341 1268 aaKnown RBP12.7□□□□□ -0.38
LINC01004-202ENST00000450686 SLC9C1Q4G0N8 1177 aa12.7□□□□□ -0.38
LINC01004-202ENST00000450686 ZNF333Q96JL9 665 aa12.7□□□□□ -0.38
LINC01004-202ENST00000450686 CPA4Q9UI42 421 aa12.7□□□□□ -0.38
LINC01004-202ENST00000450686 LRRFIP2Q9Y608 721 aaKnown RBP12.7□□□□□ -0.38
LINC01004-202ENST00000450686 TRIOBPQ9H2D6 2365 aa12.7□□□□□ -0.38
LINC01004-202ENST00000450686 DOCK2Q92608 1830 aa12.69□□□□□ -0.38
LINC01004-202ENST00000450686 GALR2O43603 387 aaPredicted RBP12.69□□□□□ -0.38
LINC01004-202ENST00000450686 CETPP11597 493 aa12.69□□□□□ -0.38
LINC01004-202ENST00000450686 ZEB1P37275 1124 aaPredicted RBP12.69□□□□□ -0.38
LINC01004-202ENST00000450686 PPIL2Q13356 520 aa12.69□□□□□ -0.38
LINC01004-202ENST00000450686 ATP2B3Q16720 1220 aa12.69□□□□□ -0.38
LINC01004-202ENST00000450686 INTS3Q68E01 1043 aaKnown RBP12.69□□□□□ -0.38
LINC01004-202ENST00000450686 FAM83AQ86UY5 434 aa12.69□□□□□ -0.38
LINC01004-202ENST00000450686 ERO1BQ86YB8 467 aa12.69□□□□□ -0.38
LINC01004-202ENST00000450686 LPIN2Q92539 896 aa12.69□□□□□ -0.38
LINC01004-202ENST00000450686 ZNF341Q9BYN7 854 aa12.69□□□□□ -0.38
LINC01004-202ENST00000450686 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.69□□□□□ -0.38
LINC01004-202ENST00000450686 FAM198AQ9UFP1 575 aa12.69□□□□□ -0.38
LINC01004-202ENST00000450686 SZT2Q5T011 3432 aa12.68□□□□□ -0.38
LINC01004-202ENST00000450686 RANBP2P49792 3224 aaKnown RBP12.68□□□□□ -0.38
LINC01004-202ENST00000450686 UBTFL1P0CB47 393 aaPredicted RBP12.68□□□□□ -0.38
LINC01004-202ENST00000450686 SNAPC2Q13487 334 aa12.68□□□□□ -0.38
LINC01004-202ENST00000450686 HHIPL2Q6UWX4 724 aa12.68□□□□□ -0.38
LINC01004-202ENST00000450686 MS4A3Q96HJ5 214 aa12.68□□□□□ -0.38
LINC01004-202ENST00000450686 USP40Q9NVE5 1235 aa12.68□□□□□ -0.38
LINC01004-202ENST00000450686 NOB1Q9ULX3 412 aaKnown RBP12.68□□□□□ -0.38
LINC01004-202ENST00000450686 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.68□□□□□ -0.38
LINC01004-202ENST00000450686 RPAP1Q9BWH6 1393 aaPredicted RBP12.68□□□□□ -0.38
LINC01004-202ENST00000450686 MAST3O60307 1309 aa12.67□□□□□ -0.38
LINC01004-202ENST00000450686 TLR2O60603 784 aa12.67□□□□□ -0.38
LINC01004-202ENST00000450686 LACTBP83111 547 aaPredicted RBP12.67□□□□□ -0.38
LINC01004-202ENST00000450686 MOGSQ13724 837 aa12.67□□□□□ -0.38
LINC01004-202ENST00000450686 MTFR1Q15390 333 aa12.67□□□□□ -0.38
LINC01004-202ENST00000450686 SLC4A8Q2Y0W8 1093 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms