RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 BEND6Q5SZJ8 279 aaPredicted RBP19.71■□□□□ 0.75
SCUBE2-202ENST00000450649 ANKLE2Q86XL3 938 aa19.71■□□□□ 0.75
SCUBE2-202ENST00000450649 GJB4Q9NTQ9 266 aa19.71■□□□□ 0.75
SCUBE2-202ENST00000450649 ADKP55263 362 aaKnown RBP19.7■□□□□ 0.74
SCUBE2-202ENST00000450649 CHMP4BP1P59074 171 aa19.7■□□□□ 0.74
SCUBE2-202ENST00000450649 PNOCQ13519 176 aa19.7■□□□□ 0.74
SCUBE2-202ENST00000450649 FOXR1Q6PIV2 292 aa19.7■□□□□ 0.74
SCUBE2-202ENST00000450649 BRAPQ7Z569 592 aa19.7■□□□□ 0.74
SCUBE2-202ENST00000450649 CHMP4CQ96CF2 233 aa19.7■□□□□ 0.74
SCUBE2-202ENST00000450649 DESI2Q9BSY9 194 aa19.7■□□□□ 0.74
SCUBE2-202ENST00000450649 KDM6AO15550 1401 aaPredicted RBP19.7■□□□□ 0.74
SCUBE2-202ENST00000450649 GTF2A1P52655 376 aaPredicted RBP19.7■□□□□ 0.74
SCUBE2-202ENST00000450649 HSP90AA4PQ58FG1 418 aa19.7■□□□□ 0.74
SCUBE2-202ENST00000450649 NOM1Q5C9Z4 860 aaKnown RBP19.7■□□□□ 0.74
SCUBE2-202ENST00000450649 ICE2Q659A1 982 aa19.7■□□□□ 0.74
SCUBE2-202ENST00000450649 UBE3BQ7Z3V4 1068 aa19.7■□□□□ 0.74
SCUBE2-202ENST00000450649 TC2NQ8N9U0 490 aa19.7■□□□□ 0.74
SCUBE2-202ENST00000450649 HNRNPLLQ8WVV9 542 aaKnown RBP19.7■□□□□ 0.74
SCUBE2-202ENST00000450649 ZNF496Q96IT1 587 aaPredicted RBP19.7■□□□□ 0.74
SCUBE2-202ENST00000450649 ORAI2Q96SN7 254 aa19.7■□□□□ 0.74
SCUBE2-202ENST00000450649 KIF28PB7ZC32 967 aa19.69■□□□□ 0.74
SCUBE2-202ENST00000450649 HDXQ7Z353 690 aa19.69■□□□□ 0.74
SCUBE2-202ENST00000450649 TICAM2Q86XR7 235 aa19.69■□□□□ 0.74
SCUBE2-202ENST00000450649 ANKZF1Q9H8Y5 726 aa19.69■□□□□ 0.74
SCUBE2-202ENST00000450649 GPHNQ9NQX3 736 aaPredicted RBP19.69■□□□□ 0.74
SCUBE2-202ENST00000450649 N4BP1O75113 896 aaKnown RBP19.69■□□□□ 0.74
SCUBE2-202ENST00000450649 OLFM4Q6UX06 510 aa19.69■□□□□ 0.74
SCUBE2-202ENST00000450649 DSCC1Q9BVC3 393 aa19.69■□□□□ 0.74
SCUBE2-202ENST00000450649 IRX2Q9BZI1 471 aaPredicted RBP19.69■□□□□ 0.74
SCUBE2-202ENST00000450649 LMOD2Q6P5Q4 547 aa19.69■□□□□ 0.74
SCUBE2-202ENST00000450649 SRGAP1Q7Z6B7 1085 aa19.69■□□□□ 0.74
SCUBE2-202ENST00000450649 RAPGEF4Q8WZA2 1011 aa19.69■□□□□ 0.74
SCUBE2-202ENST00000450649 YY1AP1Q9H869 796 aa19.69■□□□□ 0.74
SCUBE2-202ENST00000450649 PALLDQ8WX93 1383 aa19.68■□□□□ 0.74
SCUBE2-202ENST00000450649 A0A1B0GUL7 405 aa19.68■□□□□ 0.74
SCUBE2-202ENST00000450649 MYO1BO43795 1136 aa19.68■□□□□ 0.74
SCUBE2-202ENST00000450649 CUTAO60888 179 aa19.68■□□□□ 0.74
SCUBE2-202ENST00000450649 HELLSQ9NRZ9 838 aa19.68■□□□□ 0.74
SCUBE2-202ENST00000450649 PUF60Q9UHX1 559 aaKnown RBP19.68■□□□□ 0.74
SCUBE2-202ENST00000450649 SNRPA1P09661 255 aaKnown RBP19.68■□□□□ 0.74
SCUBE2-202ENST00000450649 MAGEA9P43362 315 aa19.68■□□□□ 0.74
SCUBE2-202ENST00000450649 FAN1Q9Y2M0 1017 aa19.68■□□□□ 0.74
SCUBE2-202ENST00000450649 CCDC9Q9Y3X0 531 aaKnown RBP19.68■□□□□ 0.74
SCUBE2-202ENST00000450649 RPS6KA5O75582 802 aa19.67■□□□□ 0.74
SCUBE2-202ENST00000450649 C19orf44Q9H6X5 657 aa19.67■□□□□ 0.74
SCUBE2-202ENST00000450649 MRPL44Q9H9J2 332 aaKnown RBP19.67■□□□□ 0.74
SCUBE2-202ENST00000450649 PHKG2P15735 406 aa19.67■□□□□ 0.74
SCUBE2-202ENST00000450649 SLC39A14Q15043 492 aa19.67■□□□□ 0.74
SCUBE2-202ENST00000450649 PNKPQ96T60 521 aa19.67■□□□□ 0.74
SCUBE2-202ENST00000450649 A0A087WZG4 1122 aa19.66■□□□□ 0.74
SCUBE2-202ENST00000450649 EIF3JO75822 258 aaKnown RBP19.66■□□□□ 0.74
SCUBE2-202ENST00000450649 USP5P45974 858 aa19.66■□□□□ 0.74
SCUBE2-202ENST00000450649 CASP7P55210 303 aa19.66■□□□□ 0.74
SCUBE2-202ENST00000450649 PACS2Q86VP3 889 aa19.66■□□□□ 0.74
SCUBE2-202ENST00000450649 SUGCTQ9HAC7 445 aa19.66■□□□□ 0.74
SCUBE2-202ENST00000450649 HPSEQ9Y251 543 aa19.66■□□□□ 0.74
SCUBE2-202ENST00000450649 SCN11AQ9UI33 1791 aa19.66■□□□□ 0.74
SCUBE2-202ENST00000450649 HSPD1P10809 573 aaKnown RBP19.66■□□□□ 0.74
SCUBE2-202ENST00000450649 KIF23Q02241 960 aaPredicted RBP19.66■□□□□ 0.74
SCUBE2-202ENST00000450649 TTC31Q49AM3 519 aaPredicted RBP19.66■□□□□ 0.74
SCUBE2-202ENST00000450649 SPECC1LQ69YQ0 1117 aa19.66■□□□□ 0.74
SCUBE2-202ENST00000450649 RAB21Q9UL25 225 aa19.66■□□□□ 0.74
SCUBE2-202ENST00000450649 L1RE1Q9UN81 338 aa19.66■□□□□ 0.74
SCUBE2-202ENST00000450649 EIF3CLB5ME19 914 aaKnown RBP19.65■□□□□ 0.74
SCUBE2-202ENST00000450649 PDE4BQ07343 736 aa19.65■□□□□ 0.74
SCUBE2-202ENST00000450649 MTF1Q14872 753 aa19.65■□□□□ 0.74
SCUBE2-202ENST00000450649 SHC4Q6S5L8 630 aa19.65■□□□□ 0.74
SCUBE2-202ENST00000450649 EIF3CQ99613 913 aaKnown RBP19.65■□□□□ 0.74
SCUBE2-202ENST00000450649 ABCB6Q9NP58 842 aa19.65■□□□□ 0.74
SCUBE2-202ENST00000450649 WWC2Q6AWC2 1192 aa19.65■□□□□ 0.74
SCUBE2-202ENST00000450649 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.65■□□□□ 0.74
SCUBE2-202ENST00000450649 ERLIN1O75477 346 aa19.65■□□□□ 0.74
SCUBE2-202ENST00000450649 CDC27P30260 824 aa19.65■□□□□ 0.74
SCUBE2-202ENST00000450649 METTL16Q86W50 562 aaKnown RBP19.65■□□□□ 0.74
SCUBE2-202ENST00000450649 FOXP4Q8IVH2 680 aaPredicted RBP19.65■□□□□ 0.74
SCUBE2-202ENST00000450649 POTEB2H3BUK9 544 aa19.64■□□□□ 0.73
SCUBE2-202ENST00000450649 GOLIM4O00461 696 aa19.64■□□□□ 0.73
SCUBE2-202ENST00000450649 ZMYM1Q5SVZ6 1142 aa19.64■□□□□ 0.73
SCUBE2-202ENST00000450649 TTLL5Q6EMB2 1281 aa19.64■□□□□ 0.73
SCUBE2-202ENST00000450649 MSL3Q8N5Y2 521 aaKnown RBP19.64■□□□□ 0.73
SCUBE2-202ENST00000450649 MSANTD4Q8NCY6 345 aa19.64■□□□□ 0.73
SCUBE2-202ENST00000450649 GPR108Q9NPR9 543 aa19.64■□□□□ 0.73
SCUBE2-202ENST00000450649 LZTFL1Q9NQ48 299 aa19.64■□□□□ 0.73
SCUBE2-202ENST00000450649 PAG1Q9NWQ8 432 aa19.64■□□□□ 0.73
SCUBE2-202ENST00000450649 JRKLQ9Y4A0 524 aa19.64■□□□□ 0.73
SCUBE2-202ENST00000450649 TATP17735 454 aaPredicted RBP19.64■□□□□ 0.73
SCUBE2-202ENST00000450649 LMBR1LQ6UX01 489 aa19.64■□□□□ 0.73
SCUBE2-202ENST00000450649 RAB11FIP4Q86YS3 637 aa19.64■□□□□ 0.73
SCUBE2-202ENST00000450649 TTC5Q8N0Z6 440 aa19.64■□□□□ 0.73
SCUBE2-202ENST00000450649 CEP112Q8N8E3 955 aa19.64■□□□□ 0.73
SCUBE2-202ENST00000450649 CDC23Q9UJX2 597 aa19.64■□□□□ 0.73
SCUBE2-202ENST00000450649 AKAP2Q9Y2D5 859 aa19.64■□□□□ 0.73
SCUBE2-202ENST00000450649 PCDHA5Q9Y5H7 936 aa19.64■□□□□ 0.73
SCUBE2-202ENST00000450649 ATP5J2-PTCD1G3V325 749 aa19.63■□□□□ 0.73
SCUBE2-202ENST00000450649 PTCD1O75127 700 aaKnown RBP19.63■□□□□ 0.73
SCUBE2-202ENST00000450649 CCDC175P0C221 793 aa19.63■□□□□ 0.73
SCUBE2-202ENST00000450649 BMP6P22004 513 aa19.63■□□□□ 0.73
SCUBE2-202ENST00000450649 IFNL2Q8IZJ0 200 aa19.63■□□□□ 0.73
SCUBE2-202ENST00000450649 PIP4K2AP48426 406 aaPredicted RBP19.62■□□□□ 0.73
SCUBE2-202ENST00000450649 RGS22Q8NE09 1264 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms