RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 KLRG1Q96E93 195 aa15.91■□□□□ 0.14
SNRNP27-203ENST00000450162 ECHDC1Q9NTX5 307 aa15.91■□□□□ 0.14
SNRNP27-203ENST00000450162 MROH7-TTC4A0A0A0MT08 1334 aa15.91■□□□□ 0.14
SNRNP27-203ENST00000450162 SMARCA5O60264 1052 aaPredicted RBP15.9■□□□□ 0.14
SNRNP27-203ENST00000450162 MAP3K12Q12852 859 aa15.9■□□□□ 0.14
SNRNP27-203ENST00000450162 CDC42EP5Q6NZY7 148 aa15.9■□□□□ 0.14
SNRNP27-203ENST00000450162 CERS3Q8IU89 383 aa15.9■□□□□ 0.14
SNRNP27-203ENST00000450162 HOOK2Q96ED9 719 aa15.9■□□□□ 0.14
SNRNP27-203ENST00000450162 NOL10Q9BSC4 688 aaKnown RBP15.9■□□□□ 0.14
SNRNP27-203ENST00000450162 TRPM7Q96QT4 1865 aa15.9■□□□□ 0.14
SNRNP27-203ENST00000450162 CNTNAP1P78357 1384 aa15.89■□□□□ 0.13
SNRNP27-203ENST00000450162 UNCXA6NJT0 531 aa15.89■□□□□ 0.13
SNRNP27-203ENST00000450162 PPP1R12BO60237 982 aaPredicted RBP15.89■□□□□ 0.13
SNRNP27-203ENST00000450162 BAG3O95817 575 aa15.89■□□□□ 0.13
SNRNP27-203ENST00000450162 ECE1P42892 770 aa15.89■□□□□ 0.13
SNRNP27-203ENST00000450162 HTRA3P83110 453 aa15.89■□□□□ 0.13
SNRNP27-203ENST00000450162 NAA16Q6N069 864 aaPredicted RBP15.89■□□□□ 0.13
SNRNP27-203ENST00000450162 SMC5Q8IY18 1101 aa15.89■□□□□ 0.13
SNRNP27-203ENST00000450162 USP40Q9NVE5 1235 aa15.89■□□□□ 0.13
SNRNP27-203ENST00000450162 ECM29Q5VYK3 1845 aa15.89■□□□□ 0.13
SNRNP27-203ENST00000450162 AKAP11Q9UKA4 1901 aa15.88■□□□□ 0.13
SNRNP27-203ENST00000450162 TCP10L2B9ZVM9 353 aa15.88■□□□□ 0.13
SNRNP27-203ENST00000450162 IDH1O75874 414 aaKnown RBP15.88■□□□□ 0.13
SNRNP27-203ENST00000450162 PLCG2P16885 1265 aa15.88■□□□□ 0.13
SNRNP27-203ENST00000450162 ANKRD45Q5TZF3 282 aa15.88■□□□□ 0.13
SNRNP27-203ENST00000450162 DLK2Q6UY11 383 aa15.88■□□□□ 0.13
SNRNP27-203ENST00000450162 ARMC9Q7Z3E5 817 aa15.88■□□□□ 0.13
SNRNP27-203ENST00000450162 HAUS7Q99871 368 aa15.88■□□□□ 0.13
SNRNP27-203ENST00000450162 IDI2Q9BXS1 227 aa15.88■□□□□ 0.13
SNRNP27-203ENST00000450162 BCL11AQ9H165 835 aa15.88■□□□□ 0.13
SNRNP27-203ENST00000450162 PIH1D3Q9NQM4 214 aaKnown RBP15.88■□□□□ 0.13
SNRNP27-203ENST00000450162 AOX1Q06278 1338 aa15.88■□□□□ 0.13
SNRNP27-203ENST00000450162 TTC41PQ6P2S7 1318 aa15.88■□□□□ 0.13
SNRNP27-203ENST00000450162 ERC2O15083 957 aa15.87■□□□□ 0.13
SNRNP27-203ENST00000450162 ENTPD3O75355 529 aa15.87■□□□□ 0.13
SNRNP27-203ENST00000450162 BTDP43251 543 aa15.87■□□□□ 0.13
SNRNP27-203ENST00000450162 HUNKP57058 714 aa15.87■□□□□ 0.13
SNRNP27-203ENST00000450162 PPP4CP60510 307 aa15.87■□□□□ 0.13
SNRNP27-203ENST00000450162 PRAMEF18Q5VWM3 479 aa15.87■□□□□ 0.13
SNRNP27-203ENST00000450162 ZNF384Q8TF68 577 aa15.87■□□□□ 0.13
SNRNP27-203ENST00000450162 FAM151AQ8WW52 585 aa15.87■□□□□ 0.13
SNRNP27-203ENST00000450162 SCAF8Q9UPN6 1271 aaKnown RBP15.87■□□□□ 0.13
SNRNP27-203ENST00000450162 RPAP1Q9BWH6 1393 aaPredicted RBP15.87■□□□□ 0.13
SNRNP27-203ENST00000450162 MAP3K11Q16584 847 aa15.86■□□□□ 0.13
SNRNP27-203ENST00000450162 JMYQ8N9B5 988 aa15.86■□□□□ 0.13
SNRNP27-203ENST00000450162 CCDC102AQ96A19 550 aa15.86■□□□□ 0.13
SNRNP27-203ENST00000450162 DNAJC2Q99543 621 aaKnown RBP15.86■□□□□ 0.13
SNRNP27-203ENST00000450162 BOLA2Q9H3K6 86 aa15.86■□□□□ 0.13
SNRNP27-203ENST00000450162 ANTXR1Q9H6X2 564 aa15.86■□□□□ 0.13
SNRNP27-203ENST00000450162 PAG1Q9NWQ8 432 aa15.86■□□□□ 0.13
SNRNP27-203ENST00000450162 MKRN1Q9UHC7 482 aaKnown RBP15.86■□□□□ 0.13
SNRNP27-203ENST00000450162 GOLIM4O00461 696 aa15.85■□□□□ 0.13
SNRNP27-203ENST00000450162 GLRX3O76003 335 aaKnown RBP15.85■□□□□ 0.13
SNRNP27-203ENST00000450162 TTLL12Q14166 644 aaPredicted RBP15.85■□□□□ 0.13
SNRNP27-203ENST00000450162 NBPF12Q5TAG4 269 aaPredicted RBP15.85■□□□□ 0.13
SNRNP27-203ENST00000450162 RGMBQ6NW40 437 aa15.85■□□□□ 0.13
SNRNP27-203ENST00000450162 TEPSINQ96N21 525 aa15.85■□□□□ 0.13
SNRNP27-203ENST00000450162 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.85■□□□□ 0.133e-7■□□□□ 10.9
SNRNP27-203ENST00000450162 TMEM39BQ9GZU3 492 aa15.85■□□□□ 0.13
SNRNP27-203ENST00000450162 IGHDP01880 384 aa15.84■□□□□ 0.13
SNRNP27-203ENST00000450162 CENPBP07199 599 aaPredicted RBP15.84■□□□□ 0.13
SNRNP27-203ENST00000450162 MX1P20591 662 aa15.84■□□□□ 0.13
SNRNP27-203ENST00000450162 CYP7A1P22680 504 aa15.84■□□□□ 0.13
SNRNP27-203ENST00000450162 IREB2P48200 963 aaKnown RBP15.84■□□□□ 0.13
SNRNP27-203ENST00000450162 CACNB3P54284 484 aa15.84■□□□□ 0.13
SNRNP27-203ENST00000450162 RHBDL3P58872 404 aa15.84■□□□□ 0.13
SNRNP27-203ENST00000450162 IRX6P78412 446 aaPredicted RBP15.84■□□□□ 0.13
SNRNP27-203ENST00000450162 ZSCAN25Q6NSZ9 544 aa15.84■□□□□ 0.13
SNRNP27-203ENST00000450162 MAGEB6Q8N7X4 407 aa15.84■□□□□ 0.13
SNRNP27-203ENST00000450162 CAPNS2Q96L46 248 aa15.84■□□□□ 0.13
SNRNP27-203ENST00000450162 WDR33Q9C0J8 1336 aaKnown RBP15.84■□□□□ 0.13
SNRNP27-203ENST00000450162 PAPPA2Q9BXP8 1791 aa15.84■□□□□ 0.13
SNRNP27-203ENST00000450162 MYH2Q9UKX2 1941 aa15.84■□□□□ 0.13
SNRNP27-203ENST00000450162 WDHD1O75717 1129 aaPredicted RBP15.83■□□□□ 0.12
SNRNP27-203ENST00000450162 MAP2K2P36507 400 aa15.83■□□□□ 0.12
SNRNP27-203ENST00000450162 VEGFBP49765 207 aa15.83■□□□□ 0.12
SNRNP27-203ENST00000450162 LRRFIP1Q32MZ4 808 aaKnown RBP15.83■□□□□ 0.12
SNRNP27-203ENST00000450162 LDLRAD1Q5T700 205 aa15.83■□□□□ 0.12
SNRNP27-203ENST00000450162 SLC9C2Q5TAH2 1124 aa15.83■□□□□ 0.12
SNRNP27-203ENST00000450162 DCAF15Q66K64 600 aa15.83■□□□□ 0.12
SNRNP27-203ENST00000450162 PAXIP1Q6ZW49 1069 aaPredicted RBP15.83■□□□□ 0.12
SNRNP27-203ENST00000450162 FAM198AQ9UFP1 575 aa15.83■□□□□ 0.12
SNRNP27-203ENST00000450162 STAP2Q9UGK3 403 aa15.83■□□□□ 0.12
SNRNP27-203ENST00000450162 ANGEL1Q9UNK9 670 aaKnown RBP15.83■□□□□ 0.12
SNRNP27-203ENST00000450162 NDUFB9Q9Y6M9 179 aa15.83■□□□□ 0.12
SNRNP27-203ENST00000450162 RGS3P49796 1198 aa15.82■□□□□ 0.12
SNRNP27-203ENST00000450162 ZNF157P51786 506 aaPredicted RBP15.82■□□□□ 0.12
SNRNP27-203ENST00000450162 NUCB1Q02818 461 aa15.82■□□□□ 0.12
SNRNP27-203ENST00000450162 NFIAQ12857 509 aa15.82■□□□□ 0.12
SNRNP27-203ENST00000450162 NOGQ13253 232 aa15.82■□□□□ 0.12
SNRNP27-203ENST00000450162 CHD1LQ86WJ1 897 aa15.82■□□□□ 0.12
SNRNP27-203ENST00000450162 AATFQ9NY61 560 aaKnown RBP eCLIP15.82■□□□□ 0.12
SNRNP27-203ENST00000450162 UBE2Q2LH0YL09 131 aa15.81■□□□□ 0.12
SNRNP27-203ENST00000450162 USP2O75604 605 aaPredicted RBP15.81■□□□□ 0.12
SNRNP27-203ENST00000450162 PDE6AP16499 860 aa15.81■□□□□ 0.12
SNRNP27-203ENST00000450162 TCP10Q12799 353 aa15.81■□□□□ 0.12
SNRNP27-203ENST00000450162 UBE3CQ15386 1083 aa15.81■□□□□ 0.12
SNRNP27-203ENST00000450162 RFX7Q2KHR2 1363 aa15.81■□□□□ 0.12
SNRNP27-203ENST00000450162 CYP4F22Q6NT55 531 aa15.81■□□□□ 0.12
SNRNP27-203ENST00000450162 TICAM2Q86XR7 235 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms