RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 LRP10Q7Z4F1 713 aa10.4□□□□□ -0.74
LINC01961-201ENST00000449954 KCNV2Q8TDN2 545 aa10.4□□□□□ -0.74
LINC01961-201ENST00000449954 NBPF3Q9H094 633 aa10.4□□□□□ -0.74
LINC01961-201ENST00000449954 BIN2Q9UBW5 565 aaPredicted RBP10.4□□□□□ -0.74
LINC01961-201ENST00000449954 ZNF804BA4D1E1 1349 aa10.39□□□□□ -0.75
LINC01961-201ENST00000449954 ALPK3Q96L96 1907 aa10.39□□□□□ -0.75
LINC01961-201ENST00000449954 COL2A1P02458 1487 aaPredicted RBP10.39□□□□□ -0.75
LINC01961-201ENST00000449954 FAM43AQ8N2R8 423 aa10.39□□□□□ -0.75
LINC01961-201ENST00000449954 ZBED3Q96IU2 234 aaPredicted RBP10.39□□□□□ -0.75
LINC01961-201ENST00000449954 KIAA1468Q9P260 1216 aa10.39□□□□□ -0.75
LINC01961-201ENST00000449954 RABGEF1Q9UJ41 708 aa10.39□□□□□ -0.75
LINC01961-201ENST00000449954 ECM29Q5VYK3 1845 aa10.39□□□□□ -0.75
LINC01961-201ENST00000449954 MED23Q9ULK4 1368 aa10.39□□□□□ -0.75
LINC01961-201ENST00000449954 MYPNQ86TC9 1320 aa10.38□□□□□ -0.75
LINC01961-201ENST00000449954 MAGEA10P43363 369 aaPredicted RBP10.38□□□□□ -0.75
LINC01961-201ENST00000449954 DCTN1Q14203 1278 aa10.38□□□□□ -0.75
LINC01961-201ENST00000449954 NECAB2Q7Z6G3 386 aa10.38□□□□□ -0.75
LINC01961-201ENST00000449954 C7orf61Q8IZ16 206 aa10.38□□□□□ -0.75
LINC01961-201ENST00000449954 MAFAQ8NHW3 353 aaPredicted RBP10.38□□□□□ -0.75
LINC01961-201ENST00000449954 UBE2OQ9C0C9 1292 aaKnown RBP10.38□□□□□ -0.75
LINC01961-201ENST00000449954 MIS18AQ9NYP9 233 aa10.38□□□□□ -0.75
LINC01961-201ENST00000449954 RAPGEFL1Q9UHV5 662 aa10.38□□□□□ -0.75
LINC01961-201ENST00000449954 ADGRA2Q96PE1 1338 aa10.37□□□□□ -0.75
LINC01961-201ENST00000449954 TMEM265A0A087WTH1 108 aa10.37□□□□□ -0.75
LINC01961-201ENST00000449954 MYO1BO43795 1136 aa10.37□□□□□ -0.75
LINC01961-201ENST00000449954 USP2O75604 605 aaPredicted RBP10.37□□□□□ -0.75
LINC01961-201ENST00000449954 OSBPP22059 807 aa10.37□□□□□ -0.75
LINC01961-201ENST00000449954 ATP2B4P23634 1241 aa10.37□□□□□ -0.75
LINC01961-201ENST00000449954 PSMC4P43686 418 aa10.37□□□□□ -0.75
LINC01961-201ENST00000449954 ZNF697Q5TEC3 545 aa10.37□□□□□ -0.75
LINC01961-201ENST00000449954 ELP3Q9H9T3 547 aa10.37□□□□□ -0.75
LINC01961-201ENST00000449954 ZMYND8Q9ULU4 1186 aaPredicted RBP10.37□□□□□ -0.75
LINC01961-201ENST00000449954 SYNGAP1Q96PV0 1343 aa10.36□□□□□ -0.75
LINC01961-201ENST00000449954 TFRCP02786 760 aaKnown RBP10.36□□□□□ -0.75
LINC01961-201ENST00000449954 CETPP11597 493 aa10.36□□□□□ -0.75
LINC01961-201ENST00000449954 HSP90B1P14625 803 aaKnown RBP10.36□□□□□ -0.75
LINC01961-201ENST00000449954 PTPN5P54829 565 aa10.36□□□□□ -0.75
LINC01961-201ENST00000449954 DLGAP5Q15398 846 aa10.36□□□□□ -0.75
LINC01961-201ENST00000449954 TJAP1Q5JTD0 557 aa10.36□□□□□ -0.75
LINC01961-201ENST00000449954 MTMR14Q8NCE2 650 aa10.36□□□□□ -0.75
LINC01961-201ENST00000449954 THUMPD2Q9BTF0 503 aaKnown RBP10.36□□□□□ -0.75
LINC01961-201ENST00000449954 MXD3Q9BW11 206 aa10.36□□□□□ -0.75
LINC01961-201ENST00000449954 UNC93B1Q9H1C4 597 aa10.36□□□□□ -0.75
LINC01961-201ENST00000449954 PIEZO1Q92508 2521 aa10.35□□□□□ -0.75
LINC01961-201ENST00000449954 FMNL1O95466 1100 aaPredicted RBP10.35□□□□□ -0.75
LINC01961-201ENST00000449954 NBPF12Q5TAG4 269 aaPredicted RBP10.35□□□□□ -0.75
LINC01961-201ENST00000449954 C17orf99Q6UX52 265 aa10.35□□□□□ -0.75
LINC01961-201ENST00000449954 KIAA0825Q8IV33 1275 aa10.35□□□□□ -0.75
LINC01961-201ENST00000449954 ANKLE1Q8NAG6 615 aa10.35□□□□□ -0.75
LINC01961-201ENST00000449954 WNT2BQ93097 391 aa10.35□□□□□ -0.75
LINC01961-201ENST00000449954 FAM89AQ96GI7 184 aa10.35□□□□□ -0.75
LINC01961-201ENST00000449954 PAWRQ96IZ0 340 aaKnown RBP10.35□□□□□ -0.75
LINC01961-201ENST00000449954 COA1Q9GZY4 146 aa10.35□□□□□ -0.75
LINC01961-201ENST00000449954 TRIM6-TRIM34B2RNG4 842 aa10.34□□□□□ -0.75
LINC01961-201ENST00000449954 EIF4G2P78344 907 aaKnown RBP eCLIP10.34□□□□□ -0.75
LINC01961-201ENST00000449954 MAP3K12Q12852 859 aa10.34□□□□□ -0.75
LINC01961-201ENST00000449954 COPS6Q7L5N1 327 aa10.34□□□□□ -0.75
LINC01961-201ENST00000449954 FAM161BQ96MY7 647 aa10.34□□□□□ -0.75
LINC01961-201ENST00000449954 PAK6Q9NQU5 681 aaPredicted RBP10.34□□□□□ -0.75
LINC01961-201ENST00000449954 CSADQ9Y600 493 aa10.34□□□□□ -0.75
LINC01961-201ENST00000449954 BTBD19C9JJ37 291 aa10.33□□□□□ -0.76
LINC01961-201ENST00000449954 IRS4O14654 1257 aaPredicted RBP10.33□□□□□ -0.76
LINC01961-201ENST00000449954 CTGFP29279 349 aa10.33□□□□□ -0.76
LINC01961-201ENST00000449954 PRKCZQ05513 592 aa10.33□□□□□ -0.76
LINC01961-201ENST00000449954 AIMP1Q12904 312 aaKnown RBP10.33□□□□□ -0.76
LINC01961-201ENST00000449954 SNAPC2Q13487 334 aa10.33□□□□□ -0.76
LINC01961-201ENST00000449954 TNFAIP1Q13829 316 aa10.33□□□□□ -0.76
LINC01961-201ENST00000449954 VGLL4Q14135 290 aa10.33□□□□□ -0.76
LINC01961-201ENST00000449954 PROSER3Q2NL68 480 aa10.33□□□□□ -0.76
LINC01961-201ENST00000449954 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.33□□□□□ -0.76
LINC01961-201ENST00000449954 XAGE3Q8WTP9 111 aa10.33□□□□□ -0.76
LINC01961-201ENST00000449954 DEFB118Q96PH6 123 aa10.33□□□□□ -0.76
LINC01961-201ENST00000449954 CDX2Q99626 313 aaPredicted RBP10.33□□□□□ -0.76
LINC01961-201ENST00000449954 NUDCQ9Y266 331 aa10.33□□□□□ -0.76
LINC01961-201ENST00000449954 SPDYE5A6NIY4 337 aa10.32□□□□□ -0.76
LINC01961-201ENST00000449954 SYN1P17600 705 aa10.32□□□□□ -0.76
LINC01961-201ENST00000449954 MLLT3P42568 568 aaPredicted RBP10.32□□□□□ -0.76
LINC01961-201ENST00000449954 FCGRTP55899 365 aa10.32□□□□□ -0.76
LINC01961-201ENST00000449954 CCDC152Q4G0S7 254 aa10.32□□□□□ -0.76
LINC01961-201ENST00000449954 TTLL5Q6EMB2 1281 aa10.32□□□□□ -0.76
LINC01961-201ENST00000449954 PXYLP1Q8TE99 480 aa10.32□□□□□ -0.76
LINC01961-201ENST00000449954 CFAP53Q96M91 514 aa10.32□□□□□ -0.76
LINC01961-201ENST00000449954 VEZTQ9HBM0 779 aa10.32□□□□□ -0.76
LINC01961-201ENST00000449954 SEC31BQ9NQW1 1179 aa10.32□□□□□ -0.76
LINC01961-201ENST00000449954 ADCY3O60266 1144 aa10.31□□□□□ -0.76
LINC01961-201ENST00000449954 ANXA1P04083 346 aa10.31□□□□□ -0.76
LINC01961-201ENST00000449954 INHAP05111 366 aa10.31□□□□□ -0.76
LINC01961-201ENST00000449954 EIF2S2P20042 333 aaKnown RBP10.31□□□□□ -0.76
LINC01961-201ENST00000449954 RASA3Q14644 834 aa10.31□□□□□ -0.76
LINC01961-201ENST00000449954 PACS2Q86VP3 889 aa10.31□□□□□ -0.76
LINC01961-201ENST00000449954 ANKRD18AQ8IVF6 992 aa10.31□□□□□ -0.76
LINC01961-201ENST00000449954 SNX27Q96L92 541 aa10.31□□□□□ -0.76
LINC01961-201ENST00000449954 ISCA1Q9BUE6 129 aa10.31□□□□□ -0.76
LINC01961-201ENST00000449954 SEPT9Q9UHD8 586 aaPredicted RBP10.31□□□□□ -0.76
LINC01961-201ENST00000449954 CPA4Q9UI42 421 aa10.31□□□□□ -0.76
LINC01961-201ENST00000449954 CLRN2A0PK11 232 aa10.3□□□□□ -0.76
LINC01961-201ENST00000449954 CC2D1BQ5T0F9 858 aaKnown RBP10.3□□□□□ -0.76
LINC01961-201ENST00000449954 THSD4Q6ZMP0 1018 aa10.3□□□□□ -0.76
LINC01961-201ENST00000449954 LAPTM4BQ86VI4 370 aa10.3□□□□□ -0.76
LINC01961-201ENST00000449954 ERO1BQ86YB8 467 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms