RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 MAP1SQ66K74 1059 aaPredicted RBP11.9□□□□□ -0.5
CCDC171-203ENST00000449575 FOCADQ5VW36 1801 aa11.9□□□□□ -0.5
CCDC171-203ENST00000449575 PDE6AP16499 860 aa11.9□□□□□ -0.5
CCDC171-203ENST00000449575 ANGEL2Q5VTE6 544 aaKnown RBP11.9□□□□□ -0.5
CCDC171-203ENST00000449575 SPTY2D1Q68D10 685 aaPredicted RBP11.9□□□□□ -0.5
CCDC171-203ENST00000449575 NAA16Q6N069 864 aaPredicted RBP11.9□□□□□ -0.5
CCDC171-203ENST00000449575 USP50Q70EL3 339 aaPredicted RBP11.9□□□□□ -0.5
CCDC171-203ENST00000449575 ZDHHC15Q96MV8 337 aa11.9□□□□□ -0.5
CCDC171-203ENST00000449575 GGA3Q9NZ52 723 aa11.9□□□□□ -0.5
CCDC171-203ENST00000449575 CLEC11AQ9Y240 323 aa11.9□□□□□ -0.5
CCDC171-203ENST00000449575 BAZ2AQ9UIF9 1905 aaKnown RBP11.9□□□□□ -0.5
CCDC171-203ENST00000449575 TCRBV5S4A2TA0A5A2 114 aa11.9□□□□□ -0.51
CCDC171-203ENST00000449575 L1TD1Q5T7N2 865 aaKnown RBP11.9□□□□□ -0.51
CCDC171-203ENST00000449575 TTC22Q5TAA0 569 aa11.9□□□□□ -0.51
CCDC171-203ENST00000449575 HHIPL2Q6UWX4 724 aa11.9□□□□□ -0.51
CCDC171-203ENST00000449575 KBTBD3Q8NAB2 608 aa11.9□□□□□ -0.51
CCDC171-203ENST00000449575 MIGA1Q8NAN2 632 aa11.9□□□□□ -0.51
CCDC171-203ENST00000449575 MROH7-TTC4A0A0A0MT08 1334 aa11.9□□□□□ -0.51
CCDC171-203ENST00000449575 GAKO14976 1311 aa11.9□□□□□ -0.51
CCDC171-203ENST00000449575 TRIM6-TRIM34B2RNG4 842 aa11.89□□□□□ -0.51
CCDC171-203ENST00000449575 CYP7A1P22680 504 aa11.89□□□□□ -0.51
CCDC171-203ENST00000449575 DYNLL1P63167 89 aaKnown RBP11.89□□□□□ -0.51
CCDC171-203ENST00000449575 TTF1Q15361 905 aaPredicted RBP11.89□□□□□ -0.51
CCDC171-203ENST00000449575 DHX37Q8IY37 1157 aaKnown RBP11.89□□□□□ -0.51
CCDC171-203ENST00000449575 MTMR14Q8NCE2 650 aa11.89□□□□□ -0.51
CCDC171-203ENST00000449575 RILPL2Q969X0 211 aa11.89□□□□□ -0.51
CCDC171-203ENST00000449575 ZNF532Q9HCE3 1301 aa11.89□□□□□ -0.51
CCDC171-203ENST00000449575 AATFQ9NY61 560 aaKnown RBP eCLIP11.89□□□□□ -0.51
CCDC171-203ENST00000449575 MAST3O60307 1309 aa11.89□□□□□ -0.51
CCDC171-203ENST00000449575 ADD2P35612 726 aa11.89□□□□□ -0.51
CCDC171-203ENST00000449575 BTDP43251 543 aa11.89□□□□□ -0.51
CCDC171-203ENST00000449575 HDLBPQ00341 1268 aaKnown RBP11.89□□□□□ -0.51
CCDC171-203ENST00000449575 MAP3K12Q12852 859 aa11.89□□□□□ -0.51
CCDC171-203ENST00000449575 PRAMEF18Q5VWM3 479 aa11.89□□□□□ -0.51
CCDC171-203ENST00000449575 CDC42EP5Q6NZY7 148 aa11.89□□□□□ -0.51
CCDC171-203ENST00000449575 PNMA8AQ86V59 439 aaPredicted RBP11.89□□□□□ -0.51
CCDC171-203ENST00000449575 SEC62Q99442 399 aaKnown RBP11.89□□□□□ -0.51
CCDC171-203ENST00000449575 CDAN1Q8IWY9 1227 aa11.88□□□□□ -0.51
CCDC171-203ENST00000449575 FSD1Q9BTV5 496 aa11.88□□□□□ -0.51
CCDC171-203ENST00000449575 MRIQ9BWK5 157 aa11.88□□□□□ -0.51
CCDC171-203ENST00000449575 GPR75-ASB3A0A0A6YYF3 556 aa11.88□□□□□ -0.51
CCDC171-203ENST00000449575 ADM5C9JUS6 153 aa11.88□□□□□ -0.51
CCDC171-203ENST00000449575 TRAF5O00463 557 aa11.88□□□□□ -0.51
CCDC171-203ENST00000449575 RHBDL3P58872 404 aa11.88□□□□□ -0.51
CCDC171-203ENST00000449575 NFIAQ12857 509 aa11.88□□□□□ -0.51
CCDC171-203ENST00000449575 FAM163AQ96GL9 167 aaPredicted RBP11.88□□□□□ -0.51
CCDC171-203ENST00000449575 GLIS2Q9BZE0 524 aaPredicted RBP11.88□□□□□ -0.51
CCDC171-203ENST00000449575 PUS7LQ9H0K6 701 aaKnown RBP11.88□□□□□ -0.51
CCDC171-203ENST00000449575 VEZTQ9HBM0 779 aa11.88□□□□□ -0.51
CCDC171-203ENST00000449575 ZNF70Q9UC06 446 aaPredicted RBP11.88□□□□□ -0.51
CCDC171-203ENST00000449575 MYH1P12882 1939 aa11.87□□□□□ -0.51
CCDC171-203ENST00000449575 SDSP20132 328 aa11.87□□□□□ -0.51
CCDC171-203ENST00000449575 LDHDQ86WU2 507 aa11.87□□□□□ -0.51
CCDC171-203ENST00000449575 SH3RF3Q8TEJ3 882 aaPredicted RBP11.87□□□□□ -0.51
CCDC171-203ENST00000449575 PGAP2Q9UHJ9 254 aa11.87□□□□□ -0.51
CCDC171-203ENST00000449575 TRPM7Q96QT4 1865 aa11.87□□□□□ -0.51
CCDC171-203ENST00000449575 TCP10L2B9ZVM9 353 aa11.87□□□□□ -0.51
CCDC171-203ENST00000449575 RRP9O43818 475 aaKnown RBP11.87□□□□□ -0.51
CCDC171-203ENST00000449575 SPDYE2Q495Y8 402 aa11.87□□□□□ -0.51
CCDC171-203ENST00000449575 ZFPM1Q8IX07 1006 aa11.87□□□□□ -0.51
CCDC171-203ENST00000449575 OSBP2Q969R2 916 aa11.87□□□□□ -0.51
CCDC171-203ENST00000449575 EVI5LQ96CN4 794 aa11.87□□□□□ -0.51
CCDC171-203ENST00000449575 USP40Q9NVE5 1235 aa11.87□□□□□ -0.51
CCDC171-203ENST00000449575 USP48Q86UV5 1035 aa11.86□□□□□ -0.51
CCDC171-203ENST00000449575 DDX4Q9NQI0 724 aaKnown RBP11.86□□□□□ -0.51
CCDC171-203ENST00000449575 TOMM70O94826 608 aa11.86□□□□□ -0.51
CCDC171-203ENST00000449575 SLURP2P0DP57 97 aa11.86□□□□□ -0.51
CCDC171-203ENST00000449575 CNTROBQ8N137 903 aa11.86□□□□□ -0.51
CCDC171-203ENST00000449575 LCORLQ8N3X6 602 aa11.86□□□□□ -0.51
CCDC171-203ENST00000449575 FAM227BQ96M60 508 aa11.86□□□□□ -0.51
CCDC171-203ENST00000449575 RIOK1Q9BRS2 568 aaKnown RBP11.86□□□□□ -0.51
CCDC171-203ENST00000449575 CNTNAP1P78357 1384 aa11.85□□□□□ -0.51
CCDC171-203ENST00000449575 M0R2C6 588 aa11.85□□□□□ -0.51
CCDC171-203ENST00000449575 RNF113AO15541 343 aaKnown RBP11.85□□□□□ -0.51
CCDC171-203ENST00000449575 WDHD1O75717 1129 aaPredicted RBP11.85□□□□□ -0.51
CCDC171-203ENST00000449575 ITGBL1O95965 494 aaPredicted RBP11.85□□□□□ -0.51
CCDC171-203ENST00000449575 GSTO1P78417 241 aa11.85□□□□□ -0.51
CCDC171-203ENST00000449575 TCP10Q12799 353 aa11.85□□□□□ -0.51
CCDC171-203ENST00000449575 CHADLQ6NUI6 762 aa11.85□□□□□ -0.51
CCDC171-203ENST00000449575 KRT26Q7Z3Y9 468 aa11.85□□□□□ -0.51
CCDC171-203ENST00000449575 IL25Q9H293 177 aa11.85□□□□□ -0.51
CCDC171-203ENST00000449575 ARMT1Q9H993 441 aa11.85□□□□□ -0.51
CCDC171-203ENST00000449575 FAM198AQ9UFP1 575 aa11.85□□□□□ -0.51
CCDC171-203ENST00000449575 FZD1Q9UP38 647 aa11.85□□□□□ -0.51
CCDC171-203ENST00000449575 SIPA1L1O43166 1804 aa11.85□□□□□ -0.51
CCDC171-203ENST00000449575 A0A0D9SFI3 127 aa11.85□□□□□ -0.51
CCDC171-203ENST00000449575 LDHCP07864 332 aa11.85□□□□□ -0.51
CCDC171-203ENST00000449575 MMP14P50281 582 aa11.85□□□□□ -0.51
CCDC171-203ENST00000449575 UBE3CQ15386 1083 aa11.85□□□□□ -0.51
CCDC171-203ENST00000449575 CCDC129Q6ZRS4 1044 aa11.85□□□□□ -0.51
CCDC171-203ENST00000449575 ZC3H15Q8WU90 426 aaKnown RBP11.85□□□□□ -0.51
CCDC171-203ENST00000449575 DCPSQ96C86 337 aaKnown RBP11.85□□□□□ -0.51
CCDC171-203ENST00000449575 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.85□□□□□ -0.51
CCDC171-203ENST00000449575 TMEM39BQ9GZU3 492 aa11.85□□□□□ -0.51
CCDC171-203ENST00000449575 NAV1Q8NEY1 1877 aa11.84□□□□□ -0.51
CCDC171-203ENST00000449575 PRKAB2O43741 272 aa11.84□□□□□ -0.51
CCDC171-203ENST00000449575 MYO1BO43795 1136 aa11.84□□□□□ -0.51
CCDC171-203ENST00000449575 PICALMQ13492 652 aa11.84□□□□□ -0.51
CCDC171-203ENST00000449575 SLF2Q8IX21 1173 aa11.84□□□□□ -0.51
CCDC171-203ENST00000449575 ZMYND15Q9H091 742 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms