RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 AKAP4Q5JQC9 854 aa14.08□□□□□ -0.15
UBE3B-204ENST00000449510 ACRBPQ8NEB7 543 aa14.08□□□□□ -0.15
UBE3B-204ENST00000449510 AKR1B10O60218 316 aa14.08□□□□□ -0.16
UBE3B-204ENST00000449510 GIGYF1O75420 1035 aaPredicted RBP14.08□□□□□ -0.16
UBE3B-204ENST00000449510 PRDM1O75626 825 aa14.08□□□□□ -0.16
UBE3B-204ENST00000449510 IDEP14735 1019 aa14.08□□□□□ -0.16
UBE3B-204ENST00000449510 ST3GAL1Q11201 340 aa14.08□□□□□ -0.16
UBE3B-204ENST00000449510 STIM1Q13586 685 aa14.08□□□□□ -0.16
UBE3B-204ENST00000449510 SLC35F6Q8N357 371 aa14.08□□□□□ -0.16
UBE3B-204ENST00000449510 FAM204AQ9H8W3 233 aa14.08□□□□□ -0.16
UBE3B-204ENST00000449510 CWC25Q9NXE8 425 aaPredicted RBP14.08□□□□□ -0.16
UBE3B-204ENST00000449510 CTNND2Q9UQB3 1225 aa14.08□□□□□ -0.16
UBE3B-204ENST00000449510 ATP7AQ04656 1500 aa14.08□□□□□ -0.16
UBE3B-204ENST00000449510 TTC21AQ8NDW8 1320 aa14.08□□□□□ -0.16
UBE3B-204ENST00000449510 E9PCH4 1651 aa14.08□□□□□ -0.16
UBE3B-204ENST00000449510 FGAP02671 866 aa14.08□□□□□ -0.16
UBE3B-204ENST00000449510 ATP1A2P50993 1020 aa14.08□□□□□ -0.16
UBE3B-204ENST00000449510 NLRP5P59047 1200 aa14.08□□□□□ -0.16
UBE3B-204ENST00000449510 SYCP1Q15431 976 aa14.08□□□□□ -0.16
UBE3B-204ENST00000449510 PTPROQ16827 1216 aa14.08□□□□□ -0.16
UBE3B-204ENST00000449510 AFAP1L1Q8TED9 768 aa14.08□□□□□ -0.16
UBE3B-204ENST00000449510 ZNF496Q96IT1 587 aaPredicted RBP14.08□□□□□ -0.16
UBE3B-204ENST00000449510 INCENPQ9NQS7 918 aa14.08□□□□□ -0.16
UBE3B-204ENST00000449510 MADDQ8WXG6 1647 aa14.08□□□□□ -0.16
UBE3B-204ENST00000449510 GPAA1O43292 621 aa14.07□□□□□ -0.16
UBE3B-204ENST00000449510 POSTNQ15063 836 aa14.07□□□□□ -0.16
UBE3B-204ENST00000449510 CC2D1AQ6P1N0 951 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-204ENST00000449510 MFSD6Q6ZSS7 791 aa14.07□□□□□ -0.16
UBE3B-204ENST00000449510 ABCB6Q9NP58 842 aa14.07□□□□□ -0.16
UBE3B-204ENST00000449510 ABCA8O94911 1581 aa14.07□□□□□ -0.16
UBE3B-204ENST00000449510 MED14O60244 1454 aa14.07□□□□□ -0.16
UBE3B-204ENST00000449510 ATP5JP18859 108 aa14.07□□□□□ -0.16
UBE3B-204ENST00000449510 ZAP70P43403 619 aa14.07□□□□□ -0.16
UBE3B-204ENST00000449510 CCT5P48643 541 aa14.07□□□□□ -0.16
UBE3B-204ENST00000449510 NAPGQ99747 312 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-204ENST00000449510 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.07□□□□□ -0.16
UBE3B-204ENST00000449510 SAMM50Q9Y512 469 aa14.07□□□□□ -0.16
UBE3B-204ENST00000449510 POTEB2H3BUK9 544 aa14.07□□□□□ -0.16
UBE3B-204ENST00000449510 CDC25BP30305 580 aa14.07□□□□□ -0.16
UBE3B-204ENST00000449510 HPDP32754 393 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-204ENST00000449510 PAFAH1B1P43034 410 aa14.07□□□□□ -0.16
UBE3B-204ENST00000449510 RTN1Q16799 776 aa14.07□□□□□ -0.16
UBE3B-204ENST00000449510 NCAPH2Q6IBW4 605 aa14.07□□□□□ -0.16
UBE3B-204ENST00000449510 WASF1Q92558 559 aa14.07□□□□□ -0.16
UBE3B-204ENST00000449510 PUS3Q9BZE2 481 aaKnown RBP14.07□□□□□ -0.16
UBE3B-204ENST00000449510 CEP131Q9UPN4 1083 aa14.07□□□□□ -0.16
UBE3B-204ENST00000449510 METP08581 1390 aa14.07□□□□□ -0.16
UBE3B-204ENST00000449510 CASP14P31944 242 aa14.06□□□□□ -0.16
UBE3B-204ENST00000449510 MCM7P33993 719 aa14.06□□□□□ -0.16
UBE3B-204ENST00000449510 ACTN2P35609 894 aa14.06□□□□□ -0.16
UBE3B-204ENST00000449510 PLA2G4AP47712 749 aa14.06□□□□□ -0.16
UBE3B-204ENST00000449510 PIP4K2BP78356 416 aa14.06□□□□□ -0.16
UBE3B-204ENST00000449510 CTDSPL2Q05D32 466 aa14.06□□□□□ -0.16
UBE3B-204ENST00000449510 PNPLA6Q8IY17 1366 aa14.06□□□□□ -0.16
UBE3B-204ENST00000449510 SNRPA1P09661 255 aaKnown RBP14.06□□□□□ -0.16
UBE3B-204ENST00000449510 CYP2C19P33261 490 aa14.06□□□□□ -0.16
UBE3B-204ENST00000449510 USP8P40818 1118 aa14.06□□□□□ -0.16
UBE3B-204ENST00000449510 WTAPQ15007 396 aa14.06□□□□□ -0.16
UBE3B-204ENST00000449510 KCTD16Q68DU8 428 aa14.06□□□□□ -0.16
UBE3B-204ENST00000449510 CACNA2D4Q7Z3S7 1137 aa14.06□□□□□ -0.16
UBE3B-204ENST00000449510 OTUD6BQ8N6M0 293 aa14.06□□□□□ -0.16
UBE3B-204ENST00000449510 GNL3LQ9NVN8 582 aaKnown RBP14.06□□□□□ -0.16
UBE3B-204ENST00000449510 ADCY9O60503 1353 aa14.06□□□□□ -0.16
UBE3B-204ENST00000449510 NEURL1BA8MQ27 555 aa14.06□□□□□ -0.16
UBE3B-204ENST00000449510 NDUFAB1O14561 156 aa14.06□□□□□ -0.16
UBE3B-204ENST00000449510 TFRCP02786 760 aaKnown RBP14.06□□□□□ -0.16
UBE3B-204ENST00000449510 A1BGP04217 495 aa14.06□□□□□ -0.16
UBE3B-204ENST00000449510 KIF6Q6ZMV9 814 aa14.06□□□□□ -0.16
UBE3B-204ENST00000449510 STOX1Q6ZVD7 989 aa14.06□□□□□ -0.16
UBE3B-204ENST00000449510 SND1Q7KZF4 910 aaKnown RBP eCLIP14.06□□□□□ -0.16
UBE3B-204ENST00000449510 ANKRD13CQ8N6S4 541 aa14.06□□□□□ -0.16
UBE3B-204ENST00000449510 AKAP2Q9Y2D5 859 aa14.06□□□□□ -0.16
UBE3B-204ENST00000449510 HGSO14964 777 aaPredicted RBP14.05□□□□□ -0.16
UBE3B-204ENST00000449510 CDC25AP30304 524 aa14.05□□□□□ -0.16
UBE3B-204ENST00000449510 FAM76AQ8TAV0 307 aa14.05□□□□□ -0.16
UBE3B-204ENST00000449510 UIMC1Q96RL1 719 aa14.05□□□□□ -0.16
UBE3B-204ENST00000449510 CARMIL3Q8ND23 1372 aa14.05□□□□□ -0.16
UBE3B-204ENST00000449510 CFAP74Q9C0B2 1584 aa14.05□□□□□ -0.16
UBE3B-204ENST00000449510 TRIM75PA6NK02 468 aa14.05□□□□□ -0.16
UBE3B-204ENST00000449510 N4BP1O75113 896 aaKnown RBP14.05□□□□□ -0.16
UBE3B-204ENST00000449510 TUBB4AP04350 444 aa14.05□□□□□ -0.16
UBE3B-204ENST00000449510 CMA1P23946 247 aa14.05□□□□□ -0.16
UBE3B-204ENST00000449510 CT47A1Q5JQC4 288 aaPredicted RBP14.05□□□□□ -0.16
UBE3B-204ENST00000449510 GSPT2Q8IYD1 628 aaKnown RBP14.05□□□□□ -0.16
UBE3B-204ENST00000449510 FMR1NBQ8N0W7 255 aaPredicted RBP14.05□□□□□ -0.16
UBE3B-204ENST00000449510 MMRN2Q9H8L6 949 aa14.05□□□□□ -0.16
UBE3B-204ENST00000449510 RTEL1Q9NZ71 1219 aa14.05□□□□□ -0.16
UBE3B-204ENST00000449510 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.05□□□□□ -0.16
UBE3B-204ENST00000449510 CCDC178Q5BJE1 867 aa14.05□□□□□ -0.16
UBE3B-204ENST00000449510 ZNF790Q6PG37 636 aa14.05□□□□□ -0.16
UBE3B-204ENST00000449510 SARM1Q6SZW1 724 aa14.05□□□□□ -0.16
UBE3B-204ENST00000449510 GOLGA5Q8TBA6 731 aa14.05□□□□□ -0.16
UBE3B-204ENST00000449510 CDK5RAP3Q96JB5 506 aa14.05□□□□□ -0.16
UBE3B-204ENST00000449510 VAT1LQ9HCJ6 419 aa14.05□□□□□ -0.16
UBE3B-204ENST00000449510 ANGEL1Q9UNK9 670 aaKnown RBP14.05□□□□□ -0.16
UBE3B-204ENST00000449510 GOLGA6CA6NDK9 693 aa14.04□□□□□ -0.16
UBE3B-204ENST00000449510 GOLGA6DP0CG33 693 aa14.04□□□□□ -0.16
UBE3B-204ENST00000449510 IL15P40933 162 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-204ENST00000449510 ZNF446Q9NWS9 450 aa14.04□□□□□ -0.16
UBE3B-204ENST00000449510 GOLGA6AQ9NYA3 693 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms