RNA–Protein interactions for RNA: ENST00000448984.1

TRIM49C-201, Transcript of tripartite motif containing 49C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49C, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49C-201ENST00000448984 TATP17735 454 aaPredicted RBP8.58□□□□□ -1.04
TRIM49C-201ENST00000448984 MAP3K9P80192 1104 aa8.58□□□□□ -1.04
TRIM49C-201ENST00000448984 MTA1Q13330 715 aa8.58□□□□□ -1.04
TRIM49C-201ENST00000448984 RBBP5Q15291 538 aaKnown RBP8.58□□□□□ -1.04
TRIM49C-201ENST00000448984 CAMK4Q16566 473 aa8.58□□□□□ -1.04
TRIM49C-201ENST00000448984 BEND6Q5SZJ8 279 aaPredicted RBP8.58□□□□□ -1.04
TRIM49C-201ENST00000448984 ZNF790Q6PG37 636 aa8.58□□□□□ -1.04
TRIM49C-201ENST00000448984 ZKSCAN4Q969J2 545 aaPredicted RBP8.58□□□□□ -1.04
TRIM49C-201ENST00000448984 SUCLG2Q96I99 432 aa8.58□□□□□ -1.04
TRIM49C-201ENST00000448984 SCAND2PQ9GZW5 306 aaPredicted RBP8.58□□□□□ -1.04
TRIM49C-201ENST00000448984 SIL1Q9H173 461 aa8.58□□□□□ -1.04
TRIM49C-201ENST00000448984 STRN4Q9NRL3 753 aa8.58□□□□□ -1.04
TRIM49C-201ENST00000448984 C9orf78Q9NZ63 289 aaPredicted RBP8.58□□□□□ -1.04
TRIM49C-201ENST00000448984 SLAIN2Q9P270 581 aa8.58□□□□□ -1.04
TRIM49C-201ENST00000448984 FAM169AQ9Y6X4 670 aa8.58□□□□□ -1.04
TRIM49C-201ENST00000448984 SHANK3Q9BYB0 1731 aa8.57□□□□□ -1.04
TRIM49C-201ENST00000448984 ROBO1Q9Y6N7 1651 aa8.57□□□□□ -1.04
TRIM49C-201ENST00000448984 FSBPO95073 299 aa8.57□□□□□ -1.04
TRIM49C-201ENST00000448984 IQCA1Q86XH1 822 aa8.57□□□□□ -1.04
TRIM49C-201ENST00000448984 SPATS2Q86XZ4 545 aaKnown RBP8.57□□□□□ -1.04
TRIM49C-201ENST00000448984 MSANTD4Q8NCY6 345 aa8.57□□□□□ -1.04
TRIM49C-201ENST00000448984 RHPN1Q8TCX5 695 aa8.57□□□□□ -1.04
TRIM49C-201ENST00000448984 SSH3Q8TE77 659 aa8.57□□□□□ -1.04
TRIM49C-201ENST00000448984 XAGE3Q8WTP9 111 aa8.57□□□□□ -1.04
TRIM49C-201ENST00000448984 XAGE2Q96GT9 111 aa8.57□□□□□ -1.04
TRIM49C-201ENST00000448984 SLC52A2Q9HAB3 445 aa8.57□□□□□ -1.04
TRIM49C-201ENST00000448984 BABAM1Q9NWV8 329 aa8.57□□□□□ -1.04
TRIM49C-201ENST00000448984 BECN2A8MW95 431 aa8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 ZSCAN12O43309 604 aa8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 POLA2Q14181 598 aa8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 KAZALD1Q96I82 304 aa8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 PSMD1Q99460 953 aa8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 LARP6Q9BRS8 491 aaKnown RBP8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 FAM204AQ9H8W3 233 aa8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 SOS2Q07890 1332 aaPredicted RBP8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 PARP4Q9UKK3 1724 aaKnown RBP8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 GOLGA6L4A6NEF3 574 aa8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 ATP5J2-PTCD1G3V325 749 aa8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 PTCD1O75127 700 aaKnown RBP8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 SNUPNO95149 360 aaKnown RBP8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 IGKV5-2P06315 115 aa8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 CHMLP26374 656 aa8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 SF3B2Q13435 895 aaKnown RBP8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 EPHA10Q5JZY3 1008 aa8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 KSR2Q6VAB6 950 aa8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 COPS6Q7L5N1 327 aa8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 ANKRD23Q86SG2 305 aa8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 ZNF513Q8N8E2 541 aaPredicted RBP8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 DDX54Q8TDD1 881 aaKnown RBP8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 TTC14Q96N46 770 aa8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 MYD88Q99836 296 aa8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 VIPAS39Q9H9C1 493 aa8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 ANO2Q9NQ90 1003 aa8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 CPSF2Q9P2I0 782 aaKnown RBP8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 L1RE1Q9UN81 338 aa8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 LIMCH1Q9UPQ0 1083 aa8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 RPS6KL1Q9Y6S9 549 aa8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 CPDO75976 1380 aa8.56□□□□□ -1.04
TRIM49C-201ENST00000448984 AARSP49588 968 aaKnown RBP eCLIP8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 SLC8A3P57103 927 aa8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 PLCB4Q15147 1175 aa8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 RCSD1Q6JBY9 416 aa8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 RIC3Q7Z5B4 369 aa8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 UPF3BQ9BZI7 483 aaKnown RBP8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 PRDM11Q9NQV5 511 aa8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 SHTN1A0MZ66 631 aa8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 KINO60870 393 aaKnown RBP8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 MYBL2P10244 700 aa8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 GJB2P29033 226 aa8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 HSPA4P34932 840 aa8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 PRPHP41219 470 aa8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 FNTAP49354 379 aa8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 CCNHP51946 323 aaPredicted RBP8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 MCM6Q14566 821 aa8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 SLC5A9Q2M3M2 681 aa8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 ISM2Q6H9L7 571 aa8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 ARMCX5Q6P1M9 558 aa8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 C11orf57Q6ZUT1 292 aaPredicted RBP8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 TOM1L2Q6ZVM7 507 aa8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 KIAA1328Q86T90 577 aa8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 PI4K2BQ8TCG2 481 aa8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 KCNB2Q92953 911 aa8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 TMX4Q9H1E5 349 aaPredicted RBP8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 SH2B1Q9NRF2 756 aaPredicted RBP8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 HOMER3Q9NSC5 361 aa8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 ANO10Q9NW15 660 aa8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 TLR7Q9NYK1 1049 aaKnown RBP8.55□□□□□ -1.04
TRIM49C-201ENST00000448984 HEG1Q9ULI3 1381 aa8.54□□□□□ -1.04
TRIM49C-201ENST00000448984 OVOS2A0A0G2JMS6 1433 aa8.54□□□□□ -1.04
TRIM49C-201ENST00000448984 COL5A2P05997 1499 aaPredicted RBP8.54□□□□□ -1.04
TRIM49C-201ENST00000448984 PES1O00541 588 aaKnown RBP8.54□□□□□ -1.04
TRIM49C-201ENST00000448984 HOXB7P09629 217 aa8.54□□□□□ -1.04
TRIM49C-201ENST00000448984 RPS6KA3P51812 740 aa8.54□□□□□ -1.04
TRIM49C-201ENST00000448984 CLNS1AP54105 237 aaKnown RBP8.54□□□□□ -1.04
TRIM49C-201ENST00000448984 DHX40Q8IX18 779 aaKnown RBP8.54□□□□□ -1.04
TRIM49C-201ENST00000448984 CEP57L1Q8IYX8 460 aa8.54□□□□□ -1.04
TRIM49C-201ENST00000448984 IFNL2Q8IZJ0 200 aa8.54□□□□□ -1.04
TRIM49C-201ENST00000448984 KLHL23Q8NBE8 558 aa8.54□□□□□ -1.04
TRIM49C-201ENST00000448984 MAGEC3Q8TD91 643 aa8.54□□□□□ -1.04
TRIM49C-201ENST00000448984 CCDC102AQ96A19 550 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms