RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 NBPF12Q5TAG4 269 aaPredicted RBP17.95■□□□□ 0.46
USP39-206ENST00000448971 NEUROD6Q96NK8 337 aa17.95■□□□□ 0.46
USP39-206ENST00000448971 ZBTB40Q9NUA8 1239 aa17.95■□□□□ 0.46
USP39-206ENST00000448971 ECM29Q5VYK3 1845 aa17.94■□□□□ 0.46
USP39-206ENST00000448971 PHKA1P46020 1223 aa17.94■□□□□ 0.46
USP39-206ENST00000448971 RBM5P52756 815 aaKnown RBP eCLIP17.94■□□□□ 0.46
USP39-206ENST00000448971 TIMM10P62072 90 aa17.94■□□□□ 0.46
USP39-206ENST00000448971 SUPT20HL1Q3ZLR7 823 aa17.94■□□□□ 0.46
USP39-206ENST00000448971 GORABQ5T7V8 394 aa17.94■□□□□ 0.46
USP39-206ENST00000448971 OTOP1Q7RTM1 612 aa17.94■□□□□ 0.46
USP39-206ENST00000448971 TTF2Q9UNY4 1162 aaKnown RBP17.94■□□□□ 0.46
USP39-206ENST00000448971 LAMB1P07942 1786 aa17.94■□□□□ 0.46
USP39-206ENST00000448971 CLRN2A0PK11 232 aa17.93■□□□□ 0.46
USP39-206ENST00000448971 ABCB7O75027 752 aa17.93■□□□□ 0.46
USP39-206ENST00000448971 GJA5P36382 358 aa17.93■□□□□ 0.46
USP39-206ENST00000448971 CCDC102BQ68D86 513 aa17.93■□□□□ 0.46
USP39-206ENST00000448971 RPAP2Q8IXW5 612 aaPredicted RBP17.93■□□□□ 0.46
USP39-206ENST00000448971 XAGE2Q96GT9 111 aa17.93■□□□□ 0.46
USP39-206ENST00000448971 EXOC6BQ9Y2D4 811 aa17.93■□□□□ 0.46
USP39-206ENST00000448971 TRIM17Q9Y577 477 aa17.93■□□□□ 0.46
USP39-206ENST00000448971 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.93■□□□□ 0.46
USP39-206ENST00000448971 TESPA1A2RU30 521 aaPredicted RBP17.92■□□□□ 0.46
USP39-206ENST00000448971 MYO1BO43795 1136 aa17.92■□□□□ 0.46
USP39-206ENST00000448971 PTPN18Q99952 460 aa17.92■□□□□ 0.46
USP39-206ENST00000448971 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.92■□□□□ 0.46
USP39-206ENST00000448971 DENND2AQ9ULE3 1009 aa17.92■□□□□ 0.46
USP39-206ENST00000448971 NOP58Q9Y2X3 529 aaKnown RBP17.92■□□□□ 0.46
USP39-206ENST00000448971 MAST3O60307 1309 aa17.92■□□□□ 0.46
USP39-206ENST00000448971 POTEFA5A3E0 1075 aa17.91■□□□□ 0.46
USP39-206ENST00000448971 SEMA3EO15041 775 aa17.91■□□□□ 0.46
USP39-206ENST00000448971 CAP1Q01518 475 aa17.91■□□□□ 0.46
USP39-206ENST00000448971 RASA3Q14644 834 aa17.91■□□□□ 0.46
USP39-206ENST00000448971 HSP90AB4PQ58FF6 505 aa17.91■□□□□ 0.46
USP39-206ENST00000448971 TNNI3KQ59H18 835 aa17.91■□□□□ 0.46
USP39-206ENST00000448971 ERC1Q8IUD2 1116 aa17.91■□□□□ 0.46
USP39-206ENST00000448971 WDR66Q8TBY9 1149 aa17.91■□□□□ 0.46
USP39-206ENST00000448971 FPGT-TNNI3KV9GXZ4 949 aa17.91■□□□□ 0.46
USP39-206ENST00000448971 IREB2P48200 963 aaKnown RBP17.9■□□□□ 0.46
USP39-206ENST00000448971 CRHR2Q13324 411 aa17.9■□□□□ 0.46
USP39-206ENST00000448971 RASGRF1Q13972 1273 aa17.9■□□□□ 0.46
USP39-206ENST00000448971 VEZTQ9HBM0 779 aa17.9■□□□□ 0.46
USP39-206ENST00000448971 PTPN22Q9Y2R2 807 aa17.9■□□□□ 0.46
USP39-206ENST00000448971 APBB1O00213 710 aa17.89■□□□□ 0.45
USP39-206ENST00000448971 CRKP46108 304 aa17.89■□□□□ 0.45
USP39-206ENST00000448971 GRIK5Q16478 980 aa17.89■□□□□ 0.45
USP39-206ENST00000448971 ANKRD13AQ8IZ07 590 aa17.89■□□□□ 0.45
USP39-206ENST00000448971 MS4A4AQ96JQ5 239 aa17.89■□□□□ 0.45
USP39-206ENST00000448971 GPR108Q9NPR9 543 aa17.89■□□□□ 0.45
USP39-206ENST00000448971 SERPINA10Q9UK55 444 aa17.89■□□□□ 0.45
USP39-206ENST00000448971 TTC39AQ5SRH9 613 aa17.88■□□□□ 0.45
USP39-206ENST00000448971 OTUD7BQ6GQQ9 843 aa17.88■□□□□ 0.45
USP39-206ENST00000448971 CD99L2Q8TCZ2 262 aa17.88■□□□□ 0.45
USP39-206ENST00000448971 TEKT1Q969V4 418 aa17.88■□□□□ 0.45
USP39-206ENST00000448971 ERO1AQ96HE7 468 aa17.88■□□□□ 0.45
USP39-206ENST00000448971 TEPSINQ96N21 525 aa17.88■□□□□ 0.45
USP39-206ENST00000448971 ZNF70Q9UC06 446 aaPredicted RBP17.88■□□□□ 0.45
USP39-206ENST00000448971 SUGT1Q9Y2Z0 365 aa17.88■□□□□ 0.45
USP39-206ENST00000448971 PRDX5P30044 214 aa17.87■□□□□ 0.45
USP39-206ENST00000448971 SPDYE2Q495Y8 402 aa17.87■□□□□ 0.45
USP39-206ENST00000448971 CCDC158Q5M9N0 1113 aa17.87■□□□□ 0.45
USP39-206ENST00000448971 SIRT2Q8IXJ6 389 aa17.87■□□□□ 0.45
USP39-206ENST00000448971 ZGPATQ8N5A5 531 aaKnown RBP17.87■□□□□ 0.45
USP39-206ENST00000448971 ARMC5Q96C12 935 aa17.87■□□□□ 0.45
USP39-206ENST00000448971 DBNDD2Q9BQY9 259 aa17.87■□□□□ 0.45
USP39-206ENST00000448971 SALL1Q9NSC2 1324 aa17.87■□□□□ 0.45
USP39-206ENST00000448971 LDHBP07195 334 aaKnown RBP17.86■□□□□ 0.45
USP39-206ENST00000448971 UQCRFS1P1P0C7P4 283 aa17.86■□□□□ 0.45
USP39-206ENST00000448971 ARID4AP29374 1257 aaPredicted RBP17.86■□□□□ 0.45
USP39-206ENST00000448971 SP3Q02447 781 aa17.86■□□□□ 0.45
USP39-206ENST00000448971 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.86■□□□□ 0.45
USP39-206ENST00000448971 CDAN1Q8IWY9 1227 aa17.86■□□□□ 0.45
USP39-206ENST00000448971 BCL11AQ9H165 835 aa17.86■□□□□ 0.45
USP39-206ENST00000448971 TDRD3Q9H7E2 651 aaKnown RBP17.86■□□□□ 0.45
USP39-206ENST00000448971 EFCC1Q9HA90 598 aa17.86■□□□□ 0.45
USP39-206ENST00000448971 ABCF2Q9UG63 623 aa17.86■□□□□ 0.45
USP39-206ENST00000448971 PDS5AQ29RF7 1337 aaKnown RBP17.86■□□□□ 0.45
USP39-206ENST00000448971 HDLBPQ00341 1268 aaKnown RBP17.85■□□□□ 0.45
USP39-206ENST00000448971 AACSQ86V21 672 aa17.85■□□□□ 0.45
USP39-206ENST00000448971 DZIP1Q86YF9 867 aaKnown RBP17.85■□□□□ 0.45
USP39-206ENST00000448971 RHPN1Q8TCX5 695 aa17.85■□□□□ 0.45
USP39-206ENST00000448971 GCC1Q96CN9 775 aa17.85■□□□□ 0.45
USP39-206ENST00000448971 OPTNQ96CV9 577 aa17.85■□□□□ 0.45
USP39-206ENST00000448971 KIF1BPQ96EK5 621 aa17.85■□□□□ 0.45
USP39-206ENST00000448971 CRBNQ96SW2 442 aa17.85■□□□□ 0.45
USP39-206ENST00000448971 CCDC8Q9H0W5 538 aaPredicted RBP17.85■□□□□ 0.45
USP39-206ENST00000448971 ELP3Q9H9T3 547 aa17.85■□□□□ 0.45
USP39-206ENST00000448971 IL1RAPL2Q9NP60 686 aa17.85■□□□□ 0.45
USP39-206ENST00000448971 TLR7Q9NYK1 1049 aaKnown RBP17.85■□□□□ 0.45
USP39-206ENST00000448971 CEP290O15078 2479 aa17.84■□□□□ 0.45
USP39-206ENST00000448971 TNFAIP1Q13829 316 aa17.84■□□□□ 0.45
USP39-206ENST00000448971 PI16Q6UXB8 463 aa17.84■□□□□ 0.45
USP39-206ENST00000448971 SPATA5Q8NB90 893 aa17.84■□□□□ 0.45
USP39-206ENST00000448971 EAF2Q96CJ1 260 aaPredicted RBP17.84■□□□□ 0.45
USP39-206ENST00000448971 TMOD2Q9NZR1 351 aa17.84■□□□□ 0.45
USP39-206ENST00000448971 HMG20BQ9P0W2 317 aa17.84■□□□□ 0.45
USP39-206ENST00000448971 DBNLQ9UJU6 430 aaKnown RBP17.84■□□□□ 0.45
USP39-206ENST00000448971 OTOFQ9HC10 1997 aa17.84■□□□□ 0.45
USP39-206ENST00000448971 RBBP6Q7Z6E9 1792 aaKnown RBP17.84■□□□□ 0.45
USP39-206ENST00000448971 EN2P19622 333 aaPredicted RBP17.83■□□□□ 0.44
USP39-206ENST00000448971 MCAMP43121 646 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms