RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 INF2Q27J81 1249 aa6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 APBB1IPQ7Z5R6 666 aaPredicted RBP6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 DCDC2CA8MYV0 355 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 MAPKAPK5Q8IW41 473 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 BICC1Q9H694 974 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 ADAMTSL3P82987 1691 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 DLC1Q96QB1 1528 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 SEMA3EO15041 775 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 SMC1AQ14683 1233 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 ANGEL2Q5VTE6 544 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 ELP3Q9H9T3 547 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 C3P01024 1663 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 A0A1B0GUL7 405 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 NEURL1BA8MQ27 555 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 IFIT3O14879 490 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 TXLNAP40222 546 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 SNAPC2Q13487 334 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 ZNF827Q17R98 1081 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 SMARCC2Q8TAQ2 1214 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 SEC31BQ9NQW1 1179 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 CLTCL1P53675 1640 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 CACNA1GO43497 2377 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 GNAQP50148 359 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 FAM117BQ6P1L5 589 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 ARHGAP45Q92619 1136 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 PCMTD1Q96MG8 357 aaPredicted RBP6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 PARK7Q99497 189 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 SLITRK6Q9H5Y7 841 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 GREM2Q9H772 168 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 MAP10Q9P2G4 905 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 TBC1D8O95759 1140 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 FOSBP53539 338 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 NKX1-1Q15270 411 aaPredicted RBP6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 CDK12Q9NYV4 1490 aaPredicted RBP6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 IRS2Q9Y4H2 1338 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 TNS2Q63HR2 1409 aa6.54□□□□□ -1.36
CDC42BPA-209ENST00000448940 MX1P20591 662 aa6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 ZNF354CQ86Y25 554 aa6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 CHURC1Q8WUH1 139 aa6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 BSDC1Q9NW68 430 aaPredicted RBP6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 MYL3P08590 195 aa6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 HLFQ16534 295 aa6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 HOMER1Q86YM7 354 aa6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 UNC13BO14795 1591 aa6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 UBE2Q2LH0YL09 131 aa6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 NRDCO43847 1150 aa6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 FLOT1O75955 427 aa6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 ATXN3P54252 364 aaPredicted RBP6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 MIGA2Q7L4E1 593 aa6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 GPC2Q8N158 579 aa6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 CCDC155Q8N6L0 562 aa6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 ARRDC4Q8NCT1 418 aa6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 NMRK2Q9NPI5 230 aa6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 RNF216Q9NWF9 866 aaPredicted RBP6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 AATFQ9NY61 560 aaKnown RBP eCLIP6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 GLTPD2A6NH11 291 aa6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 CENPQQ7L2Z9 268 aaPredicted RBP6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 PA2G4Q9UQ80 394 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 SLC1A4P43007 532 aa6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 NUCB2P80303 420 aa6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 CWC27Q6UX04 472 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 RHPN1Q8TCX5 695 aa6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 EXOC4Q96A65 974 aa6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 NOL7Q9UMY1 257 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 GOLGA6L6A8MZA4 724 aa6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 MYCLP12524 364 aaPredicted RBP6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 USP50Q70EL3 339 aaPredicted RBP6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 CCDC150Q8NCX0 1101 aa6.53□□□□□ -1.36
CDC42BPA-209ENST00000448940 CDC45O75419 566 aa6.52□□□□□ -1.36
CDC42BPA-209ENST00000448940 TIMM10P62072 90 aa6.52□□□□□ -1.36
CDC42BPA-209ENST00000448940 TFCP2Q12800 502 aa6.52□□□□□ -1.36
CDC42BPA-209ENST00000448940 ANKRD13AQ8IZ07 590 aa6.52□□□□□ -1.36
CDC42BPA-209ENST00000448940 TGFBRAP1Q8WUH2 860 aa6.52□□□□□ -1.36
CDC42BPA-209ENST00000448940 XAGE2Q96GT9 111 aa6.52□□□□□ -1.36
CDC42BPA-209ENST00000448940 TCHPQ9BT92 498 aa6.52□□□□□ -1.36
CDC42BPA-209ENST00000448940 BMP2KQ9NSY1 1161 aaPredicted RBP6.52□□□□□ -1.36
CDC42BPA-209ENST00000448940 MANSC4A6NHS7 340 aaPredicted RBP6.52□□□□□ -1.37
CDC42BPA-209ENST00000448940 CYP2B6P20813 491 aa6.52□□□□□ -1.37
CDC42BPA-209ENST00000448940 BTDP43251 543 aa6.52□□□□□ -1.37
CDC42BPA-209ENST00000448940 RARSP54136 660 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-209ENST00000448940 YAF2Q8IY57 180 aa6.52□□□□□ -1.37
CDC42BPA-209ENST00000448940 WASF1Q92558 559 aa6.52□□□□□ -1.37
CDC42BPA-209ENST00000448940 KIFC2Q96AC6 838 aa6.52□□□□□ -1.37
CDC42BPA-209ENST00000448940 GTF3C3Q9Y5Q9 886 aa6.52□□□□□ -1.37
CDC42BPA-209ENST00000448940 CERKLQ49MI3 558 aaPredicted RBP6.52□□□□□ -1.37
CDC42BPA-209ENST00000448940 ZNF697Q5TEC3 545 aa6.52□□□□□ -1.37
CDC42BPA-209ENST00000448940 NECAB2Q7Z6G3 386 aa6.52□□□□□ -1.37
CDC42BPA-209ENST00000448940 AGBL3Q8NEM8 1001 aa6.52□□□□□ -1.37
CDC42BPA-209ENST00000448940 DHX36Q9H2U1 1008 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-209ENST00000448940 AZI2Q9H6S1 392 aa6.52□□□□□ -1.37
CDC42BPA-209ENST00000448940 CETPP11597 493 aa6.52□□□□□ -1.37
CDC42BPA-209ENST00000448940 VAMP4O75379 141 aa6.52□□□□□ -1.37
CDC42BPA-209ENST00000448940 ASNSP08243 561 aa6.52□□□□□ -1.37
CDC42BPA-209ENST00000448940 PDE4DQ08499 809 aa6.52□□□□□ -1.37
CDC42BPA-209ENST00000448940 RDH13Q8NBN7 331 aa6.52□□□□□ -1.37
CDC42BPA-209ENST00000448940 TSC1Q92574 1164 aa6.52□□□□□ -1.37
CDC42BPA-209ENST00000448940 MEIS3Q99687 375 aa6.52□□□□□ -1.37
CDC42BPA-209ENST00000448940 TSPYL6Q8N831 410 aa6.52□□□□□ -1.37
CDC42BPA-209ENST00000448940 KRT23Q9C075 422 aa6.52□□□□□ -1.37
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