RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 SP3Q02447 781 aa35.17■■■■□ 3.22
CBX4-202ENST00000448310 CDC42EP5Q6NZY7 148 aa35.17■■■■□ 3.22
CBX4-202ENST00000448310 MIGA2Q7L4E1 593 aa35.17■■■■□ 3.22
CBX4-202ENST00000448310 FAM43AQ8N2R8 423 aa35.17■■■■□ 3.22
CBX4-202ENST00000448310 LDHBP07195 334 aaKnown RBP35.16■■■■□ 3.22
CBX4-202ENST00000448310 TCP10Q12799 353 aa35.16■■■■□ 3.22
CBX4-202ENST00000448310 TAF1CQ15572 869 aaPredicted RBP35.16■■■■□ 3.22
CBX4-202ENST00000448310 INTS3Q68E01 1043 aaKnown RBP35.16■■■■□ 3.22
CBX4-202ENST00000448310 HOOK2Q96ED9 719 aa35.16■■■■□ 3.22
CBX4-202ENST00000448310 NFIAQ12857 509 aa35.15■■■■□ 3.22
CBX4-202ENST00000448310 DCAF15Q66K64 600 aa35.15■■■■□ 3.22
CBX4-202ENST00000448310 ERO1BQ86YB8 467 aa35.15■■■■□ 3.22
CBX4-202ENST00000448310 FAM151AQ8WW52 585 aa35.15■■■■□ 3.22
CBX4-202ENST00000448310 ARHGAP45Q92619 1136 aa35.15■■■■□ 3.22
CBX4-202ENST00000448310 DENND2AQ9ULE3 1009 aa35.15■■■■□ 3.22
CBX4-202ENST00000448310 CCDC102BQ68D86 513 aa35.14■■■■□ 3.22
CBX4-202ENST00000448310 TNNQ9UQP3 1299 aa35.14■■■■□ 3.22
CBX4-202ENST00000448310 SALL1Q9NSC2 1324 aa35.13■■■■□ 3.21
CBX4-202ENST00000448310 ZNF341Q9BYN7 854 aa35.13■■■■□ 3.21
CBX4-202ENST00000448310 EFCC1Q9HA90 598 aa35.13■■■■□ 3.21
CBX4-202ENST00000448310 PTPN22Q9Y2R2 807 aa35.13■■■■□ 3.21
CBX4-202ENST00000448310 IRF6O14896 467 aa35.12■■■■□ 3.21
CBX4-202ENST00000448310 SEMA3EO15041 775 aa35.12■■■■□ 3.21
CBX4-202ENST00000448310 SRGAP3O43295 1099 aa35.12■■■■□ 3.21
CBX4-202ENST00000448310 INPP5BP32019 993 aa35.12■■■■□ 3.21
CBX4-202ENST00000448310 TIMM10P62072 90 aa35.12■■■■□ 3.21
CBX4-202ENST00000448310 ZFYVE28Q9HCC9 887 aa35.12■■■■□ 3.21
CBX4-202ENST00000448310 USP40Q9NVE5 1235 aa35.12■■■■□ 3.21
CBX4-202ENST00000448310 GNAI3P08754 354 aa35.11■■■■□ 3.21
CBX4-202ENST00000448310 FAM198AQ9UFP1 575 aa35.1■■■■□ 3.21
CBX4-202ENST00000448310 CETPP11597 493 aa35.09■■■■□ 3.21
CBX4-202ENST00000448310 TFCP2Q12800 502 aa35.09■■■■□ 3.21
CBX4-202ENST00000448310 PPIL2Q13356 520 aa35.09■■■■□ 3.21
CBX4-202ENST00000448310 RASGRF1Q13972 1273 aa35.09■■■■□ 3.21
CBX4-202ENST00000448310 ZSWIM8A7E2V4 1837 aa35.09■■■■□ 3.21
CBX4-202ENST00000448310 BCAR3O75815 825 aa35.08■■■■□ 3.21
CBX4-202ENST00000448310 TRIM27P14373 513 aa35.08■■■■□ 3.21
CBX4-202ENST00000448310 SNAPC2Q13487 334 aa35.08■■■■□ 3.21
CBX4-202ENST00000448310 FRAT1Q92837 279 aaPredicted RBP35.08■■■■□ 3.21
CBX4-202ENST00000448310 DOCK2Q92608 1830 aa35.07■■■■□ 3.2
CBX4-202ENST00000448310 A0A1B0GUL7 405 aa35.07■■■■□ 3.2
CBX4-202ENST00000448310 BTBD19C9JJ37 291 aa35.07■■■■□ 3.2
CBX4-202ENST00000448310 ZFPM1Q8IX07 1006 aa35.07■■■■□ 3.2
CBX4-202ENST00000448310 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP35.07■■■■□ 3.2
CBX4-202ENST00000448310 MTX1Q13505 466 aa35.06■■■■□ 3.2
CBX4-202ENST00000448310 XAGE2Q96GT9 111 aa35.06■■■■□ 3.2
CBX4-202ENST00000448310 ABCF2Q9UG63 623 aa35.06■■■■□ 3.2
CBX4-202ENST00000448310 CENPFP49454 3210 aa35.06■■■■□ 3.2
CBX4-202ENST00000448310 ZGPATQ8N5A5 531 aaKnown RBP35.05■■■■□ 3.2
CBX4-202ENST00000448310 ZNF112Q9UJU3 913 aa35.05■■■■□ 3.2
CBX4-202ENST00000448310 KIAA0100Q14667 2235 aaKnown RBP35.05■■■■□ 3.2
CBX4-202ENST00000448310 POTEFA5A3E0 1075 aa35.04■■■■□ 3.2
CBX4-202ENST00000448310 IPO8O15397 1037 aaKnown RBP35.04■■■■□ 3.2
CBX4-202ENST00000448310 PPATQ06203 517 aa35.04■■■■□ 3.2
CBX4-202ENST00000448310 GOLGA6L2Q8N9W4 650 aaPredicted RBP35.04■■■■□ 3.2
CBX4-202ENST00000448310 CLUAP1Q96AJ1 413 aa35.04■■■■□ 3.2
CBX4-202ENST00000448310 ZBTB22O15209 634 aa35.03■■■■□ 3.2
CBX4-202ENST00000448310 SLC34A2O95436 690 aa35.03■■■■□ 3.2
CBX4-202ENST00000448310 ATF7IPQ6VMQ6 1270 aa35.03■■■■□ 3.2
CBX4-202ENST00000448310 DZIP1Q86YF9 867 aaKnown RBP35.03■■■■□ 3.2
CBX4-202ENST00000448310 AKAP2Q9Y2D5 859 aa35.03■■■■□ 3.2
CBX4-202ENST00000448310 GAKO14976 1311 aa35.03■■■■□ 3.2
CBX4-202ENST00000448310 RBBP6Q7Z6E9 1792 aaKnown RBP35.02■■■■□ 3.2
CBX4-202ENST00000448310 RGS3P49796 1198 aa35.02■■■■□ 3.2
CBX4-202ENST00000448310 TLR2O60603 784 aa35.01■■■■□ 3.2
CBX4-202ENST00000448310 WDHD1O75717 1129 aaPredicted RBP35.01■■■■□ 3.2
CBX4-202ENST00000448310 NEUROD6Q96NK8 337 aa35.01■■■■□ 3.2
CBX4-202ENST00000448310 GNAI2P04899 355 aa35■■■■□ 3.19
CBX4-202ENST00000448310 MVPQ14764 893 aaKnown RBP35■■■■□ 3.19
CBX4-202ENST00000448310 ARMC5Q96C12 935 aa35■■■■□ 3.19
CBX4-202ENST00000448310 ZCCHC17Q9NP64 241 aaKnown RBP35■■■■□ 3.19
CBX4-202ENST00000448310 PDS5AQ29RF7 1337 aaKnown RBP35■■■■□ 3.19
CBX4-202ENST00000448310 PNMA6EA0A0J9YXQ4 647 aa34.99■■■■□ 3.19
CBX4-202ENST00000448310 ARHGAP39Q9C0H5 1083 aa34.99■■■■□ 3.19
CBX4-202ENST00000448310 PTCH2Q9Y6C5 1203 aa34.99■■■■□ 3.19
CBX4-202ENST00000448310 RFX7Q2KHR2 1363 aa34.99■■■■□ 3.19
CBX4-202ENST00000448310 NOL9Q5SY16 702 aaKnown RBP34.98■■■■□ 3.19
CBX4-202ENST00000448310 PRPF38BQ5VTL8 546 aaKnown RBP34.98■■■■□ 3.19
CBX4-202ENST00000448310 IDI2Q9BXS1 227 aa34.98■■■■□ 3.19
CBX4-202ENST00000448310 ATRNL1Q5VV63 1379 aa34.98■■■■□ 3.19
CBX4-202ENST00000448310 ECM2O94769 699 aaPredicted RBP34.97■■■■□ 3.19
CBX4-202ENST00000448310 ARHGEF6Q15052 776 aa34.97■■■■□ 3.19
CBX4-202ENST00000448310 SH3BP5LQ7L8J4 393 aa34.97■■■■□ 3.19
CBX4-202ENST00000448310 KCNH4Q9UQ05 1017 aa34.97■■■■□ 3.19
CBX4-202ENST00000448310 ENTPD3O75355 529 aa34.96■■■■□ 3.19
CBX4-202ENST00000448310 BTDP43251 543 aa34.96■■■■□ 3.19
CBX4-202ENST00000448310 SPTY2D1Q68D10 685 aaPredicted RBP34.96■■■■□ 3.19
CBX4-202ENST00000448310 PI16Q6UXB8 463 aa34.96■■■■□ 3.19
CBX4-202ENST00000448310 SLURP2P0DP57 97 aa34.95■■■■□ 3.19
CBX4-202ENST00000448310 ZSCAN29Q8IWY8 852 aaPredicted RBP34.95■■■■□ 3.19
CBX4-202ENST00000448310 SLF2Q8IX21 1173 aa34.95■■■■□ 3.19
CBX4-202ENST00000448310 TMEM57Q8N5G2 664 aa34.95■■■■□ 3.19
CBX4-202ENST00000448310 DDX4Q9NQI0 724 aaKnown RBP34.95■■■■□ 3.19
CBX4-202ENST00000448310 HMG20BQ9P0W2 317 aa34.95■■■■□ 3.19
CBX4-202ENST00000448310 MROH7-TTC4A0A0A0MT08 1334 aa34.95■■■■□ 3.19
CBX4-202ENST00000448310 LACTBP83111 547 aaPredicted RBP34.94■■■■□ 3.18
CBX4-202ENST00000448310 MECOMQ03112 1051 aa34.94■■■■□ 3.18
CBX4-202ENST00000448310 PICALMQ13492 652 aa34.94■■■■□ 3.18
CBX4-202ENST00000448310 ERICH6Q7L0X2 663 aa34.94■■■■□ 3.18
CBX4-202ENST00000448310 ANKRD23Q86SG2 305 aa34.94■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms