RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 EZH2Q15910 746 aaKnown RBP8.62□□□□□ -1.03
USP49-205ENST00000448078 BTG4Q9NY30 223 aa8.62□□□□□ -1.03
USP49-205ENST00000448078 TLR7Q9NYK1 1049 aaKnown RBP8.62□□□□□ -1.03
USP49-205ENST00000448078 CCDC144AA2RUR9 1427 aa8.62□□□□□ -1.03
USP49-205ENST00000448078 ARHGEF10O15013 1369 aa8.61□□□□□ -1.03
USP49-205ENST00000448078 ROCK1Q13464 1354 aa8.61□□□□□ -1.03
USP49-205ENST00000448078 PARD3Q8TEW0 1356 aa8.61□□□□□ -1.03
USP49-205ENST00000448078 MYO5BQ9ULV0 1848 aa8.61□□□□□ -1.03
USP49-205ENST00000448078 SLIT2O94813 1529 aa8.61□□□□□ -1.03
USP49-205ENST00000448078 TRIM37O94972 964 aa8.61□□□□□ -1.03
USP49-205ENST00000448078 EGFRP00533 1210 aa8.61□□□□□ -1.03
USP49-205ENST00000448078 ALBP02768 609 aa8.61□□□□□ -1.03
USP49-205ENST00000448078 MZF1P28698 734 aaPredicted RBP8.61□□□□□ -1.03
USP49-205ENST00000448078 DGKGP49619 791 aa8.61□□□□□ -1.03
USP49-205ENST00000448078 EVA1CP58658 441 aa8.61□□□□□ -1.03
USP49-205ENST00000448078 TRAPPC3LQ5T215 181 aa8.61□□□□□ -1.03
USP49-205ENST00000448078 BRPF3Q9ULD4 1205 aa8.61□□□□□ -1.03
USP49-205ENST00000448078 POLIQ9UNA4 740 aa8.61□□□□□ -1.03
USP49-205ENST00000448078 CROCC2H7BZ55 1655 aa8.61□□□□□ -1.03
USP49-205ENST00000448078 FAM177BA6PVY3 158 aa8.6□□□□□ -1.03
USP49-205ENST00000448078 PDGFAP04085 211 aa8.6□□□□□ -1.03
USP49-205ENST00000448078 PRRT3Q5FWE3 981 aa8.6□□□□□ -1.03
USP49-205ENST00000448078 C8orf86Q6ZUL3 223 aa8.6□□□□□ -1.03
USP49-205ENST00000448078 NCAPG2Q86XI2 1143 aa8.6□□□□□ -1.03
USP49-205ENST00000448078 CAMKK2Q96RR4 588 aa8.6□□□□□ -1.03
USP49-205ENST00000448078 PLVAPQ9BX97 442 aa8.6□□□□□ -1.03
USP49-205ENST00000448078 ABI2Q9NYB9 513 aaPredicted RBP8.6□□□□□ -1.03
USP49-205ENST00000448078 XRN1Q8IZH2 1706 aaKnown RBP8.6□□□□□ -1.03
USP49-205ENST00000448078 J3QW42 95 aa8.59□□□□□ -1.03
USP49-205ENST00000448078 BRD1O95696 1058 aa8.59□□□□□ -1.03
USP49-205ENST00000448078 USP5P45974 858 aa8.59□□□□□ -1.03
USP49-205ENST00000448078 NRLP54845 237 aa8.59□□□□□ -1.03
USP49-205ENST00000448078 GPLD1P80108 840 aa8.59□□□□□ -1.03
USP49-205ENST00000448078 KCNMA1Q12791 1236 aa8.59□□□□□ -1.03
USP49-205ENST00000448078 HYAL2Q12891 473 aa8.59□□□□□ -1.03
USP49-205ENST00000448078 WAPLQ7Z5K2 1190 aa8.59□□□□□ -1.03
USP49-205ENST00000448078 SMG9Q9H0W8 520 aaKnown RBP8.59□□□□□ -1.03
USP49-205ENST00000448078 ELP3Q9H9T3 547 aa8.59□□□□□ -1.03
USP49-205ENST00000448078 EGFL7Q9UHF1 273 aa8.59□□□□□ -1.03
USP49-205ENST00000448078 COL22A1Q8NFW1 1626 aaPredicted RBP8.58□□□□□ -1.04
USP49-205ENST00000448078 LOC102724428A0A0B4J2F2 783 aa8.58□□□□□ -1.04
USP49-205ENST00000448078 A6NHS1 94 aa8.58□□□□□ -1.04
USP49-205ENST00000448078 NDUFB5O43674 189 aa8.58□□□□□ -1.04
USP49-205ENST00000448078 ICMTO60725 284 aa8.58□□□□□ -1.04
USP49-205ENST00000448078 SIK1P57059 783 aa8.58□□□□□ -1.04
USP49-205ENST00000448078 SBNO1A3KN83 1393 aa8.58□□□□□ -1.04
USP49-205ENST00000448078 GPRASP1Q5JY77 1395 aa8.58□□□□□ -1.04
USP49-205ENST00000448078 LAMC1P11047 1609 aa8.58□□□□□ -1.04
USP49-205ENST00000448078 PDIA4P13667 645 aaKnown RBP8.57□□□□□ -1.04
USP49-205ENST00000448078 EHHADHQ08426 723 aa8.57□□□□□ -1.04
USP49-205ENST00000448078 TRIM28Q13263 835 aaKnown RBP8.57□□□□□ -1.04
USP49-205ENST00000448078 GDF6Q6KF10 455 aaPredicted RBP8.57□□□□□ -1.04
USP49-205ENST00000448078 PDE12Q6L8Q7 609 aaKnown RBP8.57□□□□□ -1.04
USP49-205ENST00000448078 TRPM4Q8TD43 1214 aa8.57□□□□□ -1.04
USP49-205ENST00000448078 SUV39H2Q9H5I1 410 aa8.57□□□□□ -1.04
USP49-205ENST00000448078 PRDM11Q9NQV5 511 aa8.57□□□□□ -1.04
USP49-205ENST00000448078 POGKQ9P215 609 aa8.57□□□□□ -1.04
USP49-205ENST00000448078 NINLQ9Y2I6 1382 aa8.57□□□□□ -1.04
USP49-205ENST00000448078 PXDNQ92626 1479 aa8.57□□□□□ -1.04
USP49-205ENST00000448078 SPATA31A5Q5VU36 1347 aa8.56□□□□□ -1.04
USP49-205ENST00000448078 SPATA31A7Q8IWB4 1347 aa8.56□□□□□ -1.04
USP49-205ENST00000448078 NAIPQ13075 1403 aa8.56□□□□□ -1.04
USP49-205ENST00000448078 CES1P23141 567 aa8.56□□□□□ -1.04
USP49-205ENST00000448078 C1QTNF8P60827 252 aa8.56□□□□□ -1.04
USP49-205ENST00000448078 PERM1Q5SV97 790 aa8.56□□□□□ -1.04
USP49-205ENST00000448078 TMEM63CQ9P1W3 806 aa8.56□□□□□ -1.04
USP49-205ENST00000448078 KANSL3Q9P2N6 904 aa8.56□□□□□ -1.04
USP49-205ENST00000448078 NAGPAQ9UK23 515 aa8.56□□□□□ -1.04
USP49-205ENST00000448078 STARD13Q9Y3M8 1113 aa8.56□□□□□ -1.04
USP49-205ENST00000448078 SPHKAPQ2M3C7 1700 aa8.56□□□□□ -1.04
USP49-205ENST00000448078 PHACTR2O75167 634 aa8.55□□□□□ -1.04
USP49-205ENST00000448078 RAC1P63000 192 aa8.55□□□□□ -1.04
USP49-205ENST00000448078 RGL3Q3MIN7 710 aa8.55□□□□□ -1.04
USP49-205ENST00000448078 LINC00114Q6XXX2 140 aa8.55□□□□□ -1.04
USP49-205ENST00000448078 WFDC8Q8IUA0 241 aa8.55□□□□□ -1.04
USP49-205ENST00000448078 OR13H1Q8NG92 308 aa8.55□□□□□ -1.04
USP49-205ENST00000448078 PLD4Q96BZ4 506 aa8.55□□□□□ -1.04
USP49-205ENST00000448078 CCDC87Q9NVE4 849 aa8.55□□□□□ -1.04
USP49-205ENST00000448078 ABCC11Q96J66 1382 aa8.55□□□□□ -1.04
USP49-205ENST00000448078 GLI3P10071 1580 aa8.55□□□□□ -1.04
USP49-205ENST00000448078 E9PCH4 1651 aa8.55□□□□□ -1.04
USP49-205ENST00000448078 DISP2A7MBM2 1401 aa8.54□□□□□ -1.04
USP49-205ENST00000448078 TNS3Q68CZ2 1445 aa8.54□□□□□ -1.04
USP49-205ENST00000448078 IQGAP3Q86VI3 1631 aa8.54□□□□□ -1.04
USP49-205ENST00000448078 ZBTB42B2RXF5 422 aa8.54□□□□□ -1.04
USP49-205ENST00000448078 SOX18P35713 384 aa8.54□□□□□ -1.04
USP49-205ENST00000448078 AEBP1Q8IUX7 1158 aa8.54□□□□□ -1.04
USP49-205ENST00000448078 KCTD17Q8N5Z5 321 aa8.54□□□□□ -1.04
USP49-205ENST00000448078 NGDNQ8NEJ9 315 aaKnown RBP8.54□□□□□ -1.04
USP49-205ENST00000448078 PMFBP1Q8TBY8 1022 aa8.54□□□□□ -1.04
USP49-205ENST00000448078 GGNBP2Q9H3C7 697 aa8.54□□□□□ -1.04
USP49-205ENST00000448078 NALCNQ8IZF0 1738 aa8.54□□□□□ -1.04
USP49-205ENST00000448078 FAM229AH3BQW9 127 aa8.53□□□□□ -1.04
USP49-205ENST00000448078 SMNDC1O75940 238 aaKnown RBP eCLIP8.53□□□□□ -1.04
USP49-205ENST00000448078 TMEM132EQ6IEE7 984 aa8.53□□□□□ -1.04
USP49-205ENST00000448078 GPAT2Q6NUI2 795 aa8.53□□□□□ -1.04
USP49-205ENST00000448078 DMRTC2Q8IXT2 367 aaPredicted RBP8.53□□□□□ -1.04
USP49-205ENST00000448078 TRIM11Q96F44 468 aa8.53□□□□□ -1.04
USP49-205ENST00000448078 DCAF5Q96JK2 942 aa8.53□□□□□ -1.04
USP49-205ENST00000448078 FRRS1LQ9P0K9 344 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms