RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 NBPF11Q86T75 865 aa10.95□□□□□ -0.66
KLHL3-202ENST00000447439 IFNKQ9P0W0 207 aa10.95□□□□□ -0.66
KLHL3-202ENST00000447439 SHANK3Q9BYB0 1731 aa10.95□□□□□ -0.66
KLHL3-202ENST00000447439 DHX16O60231 1041 aaKnown RBP10.95□□□□□ -0.66
KLHL3-202ENST00000447439 SLC3A2P08195 630 aaKnown RBP10.95□□□□□ -0.66
KLHL3-202ENST00000447439 ATP1A3P13637 1013 aa10.95□□□□□ -0.66
KLHL3-202ENST00000447439 ATP2B1P20020 1258 aa10.95□□□□□ -0.66
KLHL3-202ENST00000447439 LMOD1P29536 600 aaPredicted RBP10.95□□□□□ -0.66
KLHL3-202ENST00000447439 BCAMP50895 628 aa10.95□□□□□ -0.66
KLHL3-202ENST00000447439 GOLGA8FQ08AF8 430 aa10.95□□□□□ -0.66
KLHL3-202ENST00000447439 GOLGA8DPQ0D2H9 430 aa10.95□□□□□ -0.66
KLHL3-202ENST00000447439 RASGRF1Q13972 1273 aa10.95□□□□□ -0.66
KLHL3-202ENST00000447439 ZRSR1Q15695 479 aaKnown RBP10.95□□□□□ -0.66
KLHL3-202ENST00000447439 TMEM67Q5HYA8 995 aa10.95□□□□□ -0.66
KLHL3-202ENST00000447439 SMIM5Q71RC9 77 aa10.95□□□□□ -0.66
KLHL3-202ENST00000447439 SLC26A6Q9BXS9 759 aa10.95□□□□□ -0.66
KLHL3-202ENST00000447439 XPO4Q9C0E2 1151 aaKnown RBP10.95□□□□□ -0.66
KLHL3-202ENST00000447439 TCRBV5S4A2TA0A5A2 114 aa10.94□□□□□ -0.66
KLHL3-202ENST00000447439 FOXN1O15353 648 aa10.94□□□□□ -0.66
KLHL3-202ENST00000447439 U2AF2P26368 475 aaKnown RBP eCLIP10.94□□□□□ -0.66
KLHL3-202ENST00000447439 PNOCQ13519 176 aa10.94□□□□□ -0.66
KLHL3-202ENST00000447439 SUSD4Q5VX71 490 aa10.94□□□□□ -0.66
KLHL3-202ENST00000447439 SARM1Q6SZW1 724 aa10.94□□□□□ -0.66
KLHL3-202ENST00000447439 KCNG4Q8TDN1 519 aa10.94□□□□□ -0.66
KLHL3-202ENST00000447439 STRBPQ96SI9 672 aaKnown RBP10.94□□□□□ -0.66
KLHL3-202ENST00000447439 MAP7D2Q96T17 732 aa10.94□□□□□ -0.66
KLHL3-202ENST00000447439 POLR3EQ9NVU0 708 aa10.94□□□□□ -0.66
KLHL3-202ENST00000447439 ZSWIM5Q9P217 1185 aa10.94□□□□□ -0.66
KLHL3-202ENST00000447439 KCNJ14Q9UNX9 436 aa10.94□□□□□ -0.66
KLHL3-202ENST00000447439 ZMYM6O95789 1325 aa10.94□□□□□ -0.66
KLHL3-202ENST00000447439 GOLGA8AA7E2F4 631 aa10.94□□□□□ -0.66
KLHL3-202ENST00000447439 CCZ1BP86790 482 aa10.94□□□□□ -0.66
KLHL3-202ENST00000447439 CCZ1P86791 482 aaPredicted RBP10.94□□□□□ -0.66
KLHL3-202ENST00000447439 GRIN1Q05586 938 aa10.94□□□□□ -0.66
KLHL3-202ENST00000447439 SHC4Q6S5L8 630 aa10.94□□□□□ -0.66
KLHL3-202ENST00000447439 TMC6Q7Z403 805 aa10.94□□□□□ -0.66
KLHL3-202ENST00000447439 TICAM2Q86XR7 235 aa10.94□□□□□ -0.66
KLHL3-202ENST00000447439 MRFAP1L1Q96HT8 127 aa10.94□□□□□ -0.66
KLHL3-202ENST00000447439 FAM217BQ9NTX9 383 aaPredicted RBP10.94□□□□□ -0.66
KLHL3-202ENST00000447439 IFIT3O14879 490 aaKnown RBP10.93□□□□□ -0.66
KLHL3-202ENST00000447439 ZBTB43O43298 467 aa10.93□□□□□ -0.66
KLHL3-202ENST00000447439 PDE8AO60658 829 aa10.93□□□□□ -0.66
KLHL3-202ENST00000447439 LCORLQ8N3X6 602 aa10.93□□□□□ -0.66
KLHL3-202ENST00000447439 SPATA5Q8NB90 893 aa10.93□□□□□ -0.66
KLHL3-202ENST00000447439 IGDCC4Q8TDY8 1250 aa10.93□□□□□ -0.66
KLHL3-202ENST00000447439 LY9Q9HBG7 655 aa10.93□□□□□ -0.66
KLHL3-202ENST00000447439 CDHR2Q9BYE9 1310 aa10.93□□□□□ -0.66
KLHL3-202ENST00000447439 A0A1W2PQ27 194 aa10.93□□□□□ -0.66
KLHL3-202ENST00000447439 A0A1W2PQ64 194 aa10.93□□□□□ -0.66
KLHL3-202ENST00000447439 A0A1W2PQD8 194 aa10.93□□□□□ -0.66
KLHL3-202ENST00000447439 hCG_1642624A0A1W2PR95 340 aa10.93□□□□□ -0.66
KLHL3-202ENST00000447439 YEATS4O95619 227 aa10.93□□□□□ -0.66
KLHL3-202ENST00000447439 CDC25BP30305 580 aa10.93□□□□□ -0.66
KLHL3-202ENST00000447439 NCBP1Q09161 790 aaKnown RBP10.93□□□□□ -0.66
KLHL3-202ENST00000447439 CEP135Q66GS9 1140 aa10.93□□□□□ -0.66
KLHL3-202ENST00000447439 ATL3Q6DD88 541 aa10.93□□□□□ -0.66
KLHL3-202ENST00000447439 IFNL3Q8IZI9 196 aa10.93□□□□□ -0.66
KLHL3-202ENST00000447439 FBXL16Q8N461 479 aa10.93□□□□□ -0.66
KLHL3-202ENST00000447439 NAPBQ9H115 298 aa10.93□□□□□ -0.66
KLHL3-202ENST00000447439 MYO5AQ9Y4I1 1855 aaKnown RBP10.93□□□□□ -0.66
KLHL3-202ENST00000447439 XIRP1Q702N8 1843 aaKnown RBP10.93□□□□□ -0.66
KLHL3-202ENST00000447439 NPHP1O15259 732 aa10.92□□□□□ -0.66
KLHL3-202ENST00000447439 IARSP41252 1262 aaKnown RBP10.92□□□□□ -0.66
KLHL3-202ENST00000447439 KCNQ4P56696 695 aa10.92□□□□□ -0.66
KLHL3-202ENST00000447439 PUM3Q15397 648 aaKnown RBP10.92□□□□□ -0.66
KLHL3-202ENST00000447439 BRAPQ7Z569 592 aa10.92□□□□□ -0.66
KLHL3-202ENST00000447439 PDCL2Q8N4E4 241 aa10.92□□□□□ -0.66
KLHL3-202ENST00000447439 DPF2Q92785 391 aa10.92□□□□□ -0.66
KLHL3-202ENST00000447439 CCDC94Q9BW85 323 aaPredicted RBP10.92□□□□□ -0.66
KLHL3-202ENST00000447439 TEX13AQ9BXU3 409 aaPredicted RBP10.92□□□□□ -0.66
KLHL3-202ENST00000447439 FBXO3Q9UK99 471 aa10.92□□□□□ -0.66
KLHL3-202ENST00000447439 SLIT2O94813 1529 aa10.92□□□□□ -0.66
KLHL3-202ENST00000447439 SYKP43405 635 aa10.92□□□□□ -0.66
KLHL3-202ENST00000447439 UBE3CQ15386 1083 aa10.92□□□□□ -0.66
KLHL3-202ENST00000447439 ARMCX5Q6P1M9 558 aa10.92□□□□□ -0.66
KLHL3-202ENST00000447439 NUP133Q8WUM0 1156 aa10.92□□□□□ -0.66
KLHL3-202ENST00000447439 MPHOSPH8Q99549 860 aa10.92□□□□□ -0.66
KLHL3-202ENST00000447439 NAT10Q9H0A0 1025 aaKnown RBP10.92□□□□□ -0.66
KLHL3-202ENST00000447439 BTBD18B2RXH4 712 aa10.92□□□□□ -0.66
KLHL3-202ENST00000447439 CAVIN2O95810 425 aa10.92□□□□□ -0.66
KLHL3-202ENST00000447439 TDO2P48775 406 aa10.92□□□□□ -0.66
KLHL3-202ENST00000447439 NCAPHQ15003 741 aa10.92□□□□□ -0.66
KLHL3-202ENST00000447439 SLC39A14Q15043 492 aa10.92□□□□□ -0.66
KLHL3-202ENST00000447439 TTF1Q15361 905 aaPredicted RBP10.92□□□□□ -0.66
KLHL3-202ENST00000447439 NTRK3Q16288 839 aa10.92□□□□□ -0.66
KLHL3-202ENST00000447439 ADGRA1Q86SQ6 560 aa10.92□□□□□ -0.66
KLHL3-202ENST00000447439 GRAMD1CQ8IYS0 662 aa10.92□□□□□ -0.66
KLHL3-202ENST00000447439 SDR42E1Q8WUS8 393 aa10.92□□□□□ -0.66
KLHL3-202ENST00000447439 LPIN2Q92539 896 aa10.92□□□□□ -0.66
KLHL3-202ENST00000447439 SLC12A7Q9Y666 1083 aa10.92□□□□□ -0.66
KLHL3-202ENST00000447439 FGFR2P21802 821 aa10.91□□□□□ -0.66
KLHL3-202ENST00000447439 ARID4AP29374 1257 aaPredicted RBP10.91□□□□□ -0.66
KLHL3-202ENST00000447439 EVX2Q03828 476 aa10.91□□□□□ -0.66
KLHL3-202ENST00000447439 PTPAQ15257 358 aa10.91□□□□□ -0.66
KLHL3-202ENST00000447439 LONRF3Q496Y0 759 aa10.91□□□□□ -0.66
KLHL3-202ENST00000447439 CCDC112Q8NEF3 446 aa10.91□□□□□ -0.66
KLHL3-202ENST00000447439 CHMP4CQ96CF2 233 aa10.91□□□□□ -0.66
KLHL3-202ENST00000447439 MAP3K14Q99558 947 aa10.91□□□□□ -0.66
KLHL3-202ENST00000447439 SLC4A4Q9Y6R1 1079 aa10.91□□□□□ -0.66
KLHL3-202ENST00000447439 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms