RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 TDRD7Q8NHU6 1098 aaKnown RBP9.05□□□□□ -0.96
LRRC28-203ENST00000447360 ZKSCAN4Q969J2 545 aaPredicted RBP9.05□□□□□ -0.96
LRRC28-203ENST00000447360 GDF15Q99988 308 aa9.05□□□□□ -0.96
LRRC28-203ENST00000447360 ADGRA2Q96PE1 1338 aa9.05□□□□□ -0.96
LRRC28-203ENST00000447360 TFRCP02786 760 aaKnown RBP9.04□□□□□ -0.96
LRRC28-203ENST00000447360 HDLBPQ00341 1268 aaKnown RBP9.04□□□□□ -0.96
LRRC28-203ENST00000447360 PRKCZQ05513 592 aa9.04□□□□□ -0.96
LRRC28-203ENST00000447360 IFIT5Q13325 482 aaKnown RBP9.04□□□□□ -0.96
LRRC28-203ENST00000447360 NBR1Q14596 966 aa9.04□□□□□ -0.96
LRRC28-203ENST00000447360 WDR43Q15061 677 aaKnown RBP eCLIP9.04□□□□□ -0.96
LRRC28-203ENST00000447360 FKBP1CQ5VVH2 108 aa9.04□□□□□ -0.96
LRRC28-203ENST00000447360 DCAF15Q66K64 600 aa9.04□□□□□ -0.96
LRRC28-203ENST00000447360 FAM83AQ86UY5 434 aa9.04□□□□□ -0.96
LRRC28-203ENST00000447360 PXYLP1Q8TE99 480 aa9.04□□□□□ -0.96
LRRC28-203ENST00000447360 COL25A1Q9BXS0 654 aaPredicted RBP9.04□□□□□ -0.96
LRRC28-203ENST00000447360 STK31Q9BXU1 1019 aa9.04□□□□□ -0.96
LRRC28-203ENST00000447360 UNC93B1Q9H1C4 597 aa9.04□□□□□ -0.96
LRRC28-203ENST00000447360 MYH16Q9H6N6 1097 aa9.04□□□□□ -0.96
LRRC28-203ENST00000447360 TSHZ2Q9NRE2 1034 aa9.04□□□□□ -0.96
LRRC28-203ENST00000447360 MTMR10Q9NXD2 777 aa9.04□□□□□ -0.96
LRRC28-203ENST00000447360 ECM29Q5VYK3 1845 aa9.03□□□□□ -0.96
LRRC28-203ENST00000447360 BCRP11274 1271 aa9.03□□□□□ -0.96
LRRC28-203ENST00000447360 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.03□□□□□ -0.96
LRRC28-203ENST00000447360 PARK7Q99497 189 aaKnown RBP9.03□□□□□ -0.96
LRRC28-203ENST00000447360 MRIQ9BWK5 157 aa9.03□□□□□ -0.96
LRRC28-203ENST00000447360 CRISPLD2Q9H0B8 497 aa9.03□□□□□ -0.96
LRRC28-203ENST00000447360 PAK6Q9NQU5 681 aaPredicted RBP9.03□□□□□ -0.96
LRRC28-203ENST00000447360 ADAMTS8Q9UP79 889 aa9.03□□□□□ -0.96
LRRC28-203ENST00000447360 KCNH4Q9UQ05 1017 aa9.03□□□□□ -0.96
LRRC28-203ENST00000447360 MUC3AQ02505 3323 aa9.03□□□□□ -0.96
LRRC28-203ENST00000447360 OTOFQ9HC10 1997 aa9.03□□□□□ -0.96
LRRC28-203ENST00000447360 ADCY3O60266 1144 aa9.02□□□□□ -0.97
LRRC28-203ENST00000447360 HIBADHP31937 336 aaKnown RBP9.02□□□□□ -0.97
LRRC28-203ENST00000447360 IRF5Q13568 498 aa9.02□□□□□ -0.97
LRRC28-203ENST00000447360 MOGSQ13724 837 aa9.02□□□□□ -0.97
LRRC28-203ENST00000447360 UBE4AQ14139 1066 aa9.02□□□□□ -0.97
LRRC28-203ENST00000447360 LDHAL6AQ6ZMR3 332 aa9.02□□□□□ -0.97
LRRC28-203ENST00000447360 Q7L0L9 218 aa9.02□□□□□ -0.97
LRRC28-203ENST00000447360 NECAB2Q7Z6G3 386 aa9.02□□□□□ -0.97
LRRC28-203ENST00000447360 PLCD3Q8N3E9 789 aa9.02□□□□□ -0.97
LRRC28-203ENST00000447360 LINS1Q8NG48 757 aa9.02□□□□□ -0.97
LRRC28-203ENST00000447360 TEKT1Q969V4 418 aa9.02□□□□□ -0.97
LRRC28-203ENST00000447360 PAWRQ96IZ0 340 aaKnown RBP9.02□□□□□ -0.97
LRRC28-203ENST00000447360 DEFB118Q96PH6 123 aa9.02□□□□□ -0.97
LRRC28-203ENST00000447360 ZNF341Q9BYN7 854 aa9.02□□□□□ -0.97
LRRC28-203ENST00000447360 TMOD2Q9NZR1 351 aa9.02□□□□□ -0.97
LRRC28-203ENST00000447360 GABRQQ9UN88 632 aa9.02□□□□□ -0.97
LRRC28-203ENST00000447360 EYSQ5T1H1 3165 aa9.02□□□□□ -0.97
LRRC28-203ENST00000447360 CXCL11O14625 94 aa9.01□□□□□ -0.97
LRRC28-203ENST00000447360 PLIN1O60240 522 aa9.01□□□□□ -0.97
LRRC28-203ENST00000447360 INHAP05111 366 aa9.01□□□□□ -0.97
LRRC28-203ENST00000447360 FLT3LGP49771 235 aa9.01□□□□□ -0.97
LRRC28-203ENST00000447360 CACNB3P54284 484 aa9.01□□□□□ -0.97
LRRC28-203ENST00000447360 FOXO4P98177 505 aa9.01□□□□□ -0.97
LRRC28-203ENST00000447360 DDX10Q13206 875 aaKnown RBP9.01□□□□□ -0.97
LRRC28-203ENST00000447360 CCDC57Q2TAC2 916 aa9.01□□□□□ -0.97
LRRC28-203ENST00000447360 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.01□□□□□ -0.97
LRRC28-203ENST00000447360 TDHQ8IZJ6 230 aa9.01□□□□□ -0.97
LRRC28-203ENST00000447360 TSPYL6Q8N831 410 aa9.01□□□□□ -0.97
LRRC28-203ENST00000447360 ANKLE1Q8NAG6 615 aa9.01□□□□□ -0.97
LRRC28-203ENST00000447360 TBC1D22AQ8WUA7 517 aa9.01□□□□□ -0.97
LRRC28-203ENST00000447360 FAM84BQ96KN1 310 aaPredicted RBP9.01□□□□□ -0.97
LRRC28-203ENST00000447360 ZDHHC15Q96MV8 337 aa9.01□□□□□ -0.97
LRRC28-203ENST00000447360 ZNF112Q9UJU3 913 aa9.01□□□□□ -0.97
LRRC28-203ENST00000447360 RPAP1Q9BWH6 1393 aaPredicted RBP9□□□□□ -0.97
LRRC28-203ENST00000447360 MYH3P11055 1940 aa9□□□□□ -0.97
LRRC28-203ENST00000447360 ELNP15502 786 aa9□□□□□ -0.97
LRRC28-203ENST00000447360 INPP5BP32019 993 aa9□□□□□ -0.97
LRRC28-203ENST00000447360 GYG1P46976 350 aa9□□□□□ -0.97
LRRC28-203ENST00000447360 BCAMP50895 628 aa9□□□□□ -0.97
LRRC28-203ENST00000447360 TAF7LQ5H9L4 462 aa9□□□□□ -0.97
LRRC28-203ENST00000447360 APOBEC3HQ6NTF7 200 aaKnown RBP9□□□□□ -0.97
LRRC28-203ENST00000447360 GPAT2Q6NUI2 795 aa9□□□□□ -0.97
LRRC28-203ENST00000447360 G2E3Q7L622 706 aa9□□□□□ -0.97
LRRC28-203ENST00000447360 DNAAF4Q8WXU2 420 aa9□□□□□ -0.97
LRRC28-203ENST00000447360 CNNM1Q9NRU3 951 aa9□□□□□ -0.97
LRRC28-203ENST00000447360 CHMP3Q9Y3E7 222 aa9□□□□□ -0.97
LRRC28-203ENST00000447360 ZSWIM8A7E2V4 1837 aa9□□□□□ -0.97
LRRC28-203ENST00000447360 PRUNE2Q8WUY3 3088 aa9□□□□□ -0.97
LRRC28-203ENST00000447360 MYBBP1AQ9BQG0 1328 aaKnown RBP9□□□□□ -0.97
LRRC28-203ENST00000447360 SPEF2Q9C093 1822 aa8.99□□□□□ -0.97
LRRC28-203ENST00000447360 TNPO2O14787 897 aaKnown RBP8.99□□□□□ -0.97
LRRC28-203ENST00000447360 CYP2C8P10632 490 aa8.99□□□□□ -0.97
LRRC28-203ENST00000447360 FLIIQ13045 1269 aa8.99□□□□□ -0.97
LRRC28-203ENST00000447360 GRIK5Q16478 980 aa8.99□□□□□ -0.97
LRRC28-203ENST00000447360 NOL9Q5SY16 702 aaKnown RBP8.99□□□□□ -0.97
LRRC28-203ENST00000447360 LMBR1LQ6UX01 489 aa8.99□□□□□ -0.97
LRRC28-203ENST00000447360 MIGA2Q7L4E1 593 aa8.99□□□□□ -0.97
LRRC28-203ENST00000447360 FASTKD5Q7L8L6 764 aaKnown RBP8.99□□□□□ -0.97
LRRC28-203ENST00000447360 C7orf61Q8IZ16 206 aa8.99□□□□□ -0.97
LRRC28-203ENST00000447360 NBPF3Q9H094 633 aa8.99□□□□□ -0.97
LRRC28-203ENST00000447360 SLC45A1Q9Y2W3 748 aa8.99□□□□□ -0.97
LRRC28-203ENST00000447360 SUGT1Q9Y2Z0 365 aa8.99□□□□□ -0.97
LRRC28-203ENST00000447360 APAF1O14727 1248 aa8.98□□□□□ -0.97
LRRC28-203ENST00000447360 MAGEA10P43363 369 aaPredicted RBP8.98□□□□□ -0.97
LRRC28-203ENST00000447360 FKBP5Q13451 457 aaPredicted RBP8.98□□□□□ -0.97
LRRC28-203ENST00000447360 FAM109BQ6ICB4 259 aaPredicted RBP8.98□□□□□ -0.97
LRRC28-203ENST00000447360 HHIPL2Q6UWX4 724 aa8.98□□□□□ -0.97
LRRC28-203ENST00000447360 FBXO33Q7Z6M2 555 aa8.98□□□□□ -0.97
LRRC28-203ENST00000447360 VPS37DQ86XT2 251 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms