RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 GSTM4Q03013 218 aa7.55□□□□□ -1.2
LINC00440-201ENST00000446579 FMNL2Q96PY5 1086 aa7.55□□□□□ -1.2
LINC00440-201ENST00000446579 BACH2Q9BYV9 841 aa7.55□□□□□ -1.2
LINC00440-201ENST00000446579 NLRP2Q9NX02 1062 aa7.55□□□□□ -1.2
LINC00440-201ENST00000446579 FAM95CA0A1B0GW59 222 aa7.54□□□□□ -1.2
LINC00440-201ENST00000446579 F13BP05160 661 aa7.54□□□□□ -1.2
LINC00440-201ENST00000446579 ITGAEP38570 1179 aa7.54□□□□□ -1.2
LINC00440-201ENST00000446579 PTPN12Q05209 780 aaKnown RBP7.54□□□□□ -1.2
LINC00440-201ENST00000446579 PCDH1Q08174 1060 aa7.54□□□□□ -1.2
LINC00440-201ENST00000446579 ENOX2Q16206 610 aaKnown RBP7.54□□□□□ -1.2
LINC00440-201ENST00000446579 SPRED3Q2MJR0 410 aa7.54□□□□□ -1.2
LINC00440-201ENST00000446579 TSNAXIP1Q2TAA8 658 aa7.54□□□□□ -1.2
LINC00440-201ENST00000446579 PRPF40BQ6NWY9 871 aaKnown RBP7.54□□□□□ -1.2
LINC00440-201ENST00000446579 PAOXQ6QHF9 649 aa7.54□□□□□ -1.2
LINC00440-201ENST00000446579 TMC4Q7Z404 712 aa7.54□□□□□ -1.2
LINC00440-201ENST00000446579 SMG8Q8ND04 991 aaKnown RBP7.54□□□□□ -1.2
LINC00440-201ENST00000446579 FBLIM1Q8WUP2 373 aa7.54□□□□□ -1.2
LINC00440-201ENST00000446579 TMPRSS13Q9BYE2 586 aa7.54□□□□□ -1.2
LINC00440-201ENST00000446579 PPP4R2Q9NY27 417 aa7.54□□□□□ -1.2
LINC00440-201ENST00000446579 USP35Q9P2H5 1018 aa7.54□□□□□ -1.2
LINC00440-201ENST00000446579 SCAMP3O14828 347 aaKnown RBP7.53□□□□□ -1.2
LINC00440-201ENST00000446579 ITPKAP23677 461 aa7.53□□□□□ -1.2
LINC00440-201ENST00000446579 DAB2P98082 770 aa7.53□□□□□ -1.2
LINC00440-201ENST00000446579 EXOSC6Q5RKV6 272 aaKnown RBP7.53□□□□□ -1.2
LINC00440-201ENST00000446579 DDX54Q8TDD1 881 aaKnown RBP7.53□□□□□ -1.2
LINC00440-201ENST00000446579 EPS8L3Q8TE67 593 aaKnown RBP7.53□□□□□ -1.2
LINC00440-201ENST00000446579 PARP2Q9UGN5 583 aa7.53□□□□□ -1.2
LINC00440-201ENST00000446579 SHROOM4Q9ULL8 1493 aa7.52□□□□□ -1.21
LINC00440-201ENST00000446579 PNMA6FA0A0J9YX94 578 aa7.52□□□□□ -1.21
LINC00440-201ENST00000446579 TMEM238LA0A1B0GVL6 79 aa7.52□□□□□ -1.21
LINC00440-201ENST00000446579 DLGAP3O95886 979 aa7.52□□□□□ -1.21
LINC00440-201ENST00000446579 YBX3P16989 372 aaKnown RBP eCLIP7.52□□□□□ -1.21
LINC00440-201ENST00000446579 MAPK8P45983 427 aa7.52□□□□□ -1.21
LINC00440-201ENST00000446579 ZC3H6P61129 1189 aaKnown RBP7.52□□□□□ -1.21
LINC00440-201ENST00000446579 DUSP9Q99956 384 aaKnown RBP7.52□□□□□ -1.21
LINC00440-201ENST00000446579 SUGCTQ9HAC7 445 aa7.52□□□□□ -1.21
LINC00440-201ENST00000446579 ZFYVE1Q9HBF4 777 aa7.52□□□□□ -1.21
LINC00440-201ENST00000446579 TIAF1O95411 115 aa7.51□□□□□ -1.21
LINC00440-201ENST00000446579 XPCQ01831 940 aaPredicted RBP7.51□□□□□ -1.21
LINC00440-201ENST00000446579 GRM2Q14416 872 aa7.51□□□□□ -1.21
LINC00440-201ENST00000446579 ZNF423Q2M1K9 1284 aa7.51□□□□□ -1.21
LINC00440-201ENST00000446579 RPS26P11Q5JNZ5 115 aaPredicted RBP7.51□□□□□ -1.21
LINC00440-201ENST00000446579 CDPF1Q6NVV7 123 aa7.51□□□□□ -1.21
LINC00440-201ENST00000446579 TBC1D32Q96NH3 1257 aa7.51□□□□□ -1.21
LINC00440-201ENST00000446579 YIPF2Q9BWQ6 316 aa7.51□□□□□ -1.21
LINC00440-201ENST00000446579 ZNF576Q9H609 170 aa7.51□□□□□ -1.21
LINC00440-201ENST00000446579 ABCB6Q9NP58 842 aa7.51□□□□□ -1.21
LINC00440-201ENST00000446579 B3GALT4O96024 378 aa7.5□□□□□ -1.21
LINC00440-201ENST00000446579 CYP11A1P05108 521 aa7.5□□□□□ -1.21
LINC00440-201ENST00000446579 FOSL1P15407 271 aa7.5□□□□□ -1.21
LINC00440-201ENST00000446579 ATP2B2Q01814 1243 aa7.5□□□□□ -1.21
LINC00440-201ENST00000446579 ALG1LQ6GMV1 187 aa7.5□□□□□ -1.21
LINC00440-201ENST00000446579 ABI1Q8IZP0 508 aa7.5□□□□□ -1.21
LINC00440-201ENST00000446579 SHISA5Q8N114 240 aa7.5□□□□□ -1.21
LINC00440-201ENST00000446579 FBF1Q8TES7 1133 aa7.5□□□□□ -1.21
LINC00440-201ENST00000446579 KRTAP9-9Q9BYP9 154 aa7.5□□□□□ -1.21
LINC00440-201ENST00000446579 KRTAP9-4Q9BYQ2 154 aa7.5□□□□□ -1.21
LINC00440-201ENST00000446579 ADGRE2Q9UHX3 823 aa7.5□□□□□ -1.21
LINC00440-201ENST00000446579 CYP26A1O43174 497 aa7.49□□□□□ -1.21
LINC00440-201ENST00000446579 SORBS3O60504 671 aa7.49□□□□□ -1.21
LINC00440-201ENST00000446579 XRCC5P13010 732 aaKnown RBP7.49□□□□□ -1.21
LINC00440-201ENST00000446579 HDLBPQ00341 1268 aaKnown RBP7.49□□□□□ -1.21
LINC00440-201ENST00000446579 SOX4Q06945 474 aaPredicted RBP7.49□□□□□ -1.21
LINC00440-201ENST00000446579 HP1BP3Q5SSJ5 553 aaPredicted RBP7.49□□□□□ -1.21
LINC00440-201ENST00000446579 TP53INP2Q8IXH6 220 aa7.49□□□□□ -1.21
LINC00440-201ENST00000446579 GLIS3Q8NEA6 775 aa7.49□□□□□ -1.21
LINC00440-201ENST00000446579 SREK1Q8WXA9 508 aaKnown RBP7.49□□□□□ -1.21
LINC00440-201ENST00000446579 METTL22Q9BUU2 404 aaPredicted RBP7.49□□□□□ -1.21
LINC00440-201ENST00000446579 METTL5Q9NRN9 209 aaKnown RBP7.49□□□□□ -1.21
LINC00440-201ENST00000446579 WWC3Q9ULE0 1092 aa7.49□□□□□ -1.21
LINC00440-201ENST00000446579 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.48□□□□□ -1.21
LINC00440-201ENST00000446579 METTL16Q86W50 562 aaKnown RBP7.48□□□□□ -1.21
LINC00440-201ENST00000446579 C2CD4AQ8NCU7 369 aaPredicted RBP7.48□□□□□ -1.21
LINC00440-201ENST00000446579 FRMD6Q96NE9 622 aa7.48□□□□□ -1.21
LINC00440-201ENST00000446579 SETDB2Q96T68 719 aa7.48□□□□□ -1.21
LINC00440-201ENST00000446579 BCO2Q9BYV7 579 aa7.48□□□□□ -1.21
LINC00440-201ENST00000446579 RNF19AQ9NV58 838 aa7.48□□□□□ -1.21
LINC00440-201ENST00000446579 CCDC39Q9UFE4 941 aa7.48□□□□□ -1.21
LINC00440-201ENST00000446579 RAB6AP20340 208 aa7.47□□□□□ -1.21
LINC00440-201ENST00000446579 ERCC5P28715 1186 aaPredicted RBP7.47□□□□□ -1.21
LINC00440-201ENST00000446579 GNA15P30679 374 aa7.47□□□□□ -1.21
LINC00440-201ENST00000446579 PSMD2Q13200 908 aa7.47□□□□□ -1.21
LINC00440-201ENST00000446579 CPSF6Q16630 551 aaKnown RBP eCLIP7.47□□□□□ -1.21
LINC00440-201ENST00000446579 MSMPQ1L6U9 139 aa7.47□□□□□ -1.21
LINC00440-201ENST00000446579 PI16Q6UXB8 463 aa7.47□□□□□ -1.21
LINC00440-201ENST00000446579 DTHD1Q6ZMT9 781 aa7.47□□□□□ -1.21
LINC00440-201ENST00000446579 DRC1Q96MC2 740 aa7.47□□□□□ -1.21
LINC00440-201ENST00000446579 FAM161BQ96MY7 647 aa7.47□□□□□ -1.21
LINC00440-201ENST00000446579 NRSN2Q9GZP1 204 aa7.47□□□□□ -1.21
LINC00440-201ENST00000446579 MRS2Q9HD23 443 aa7.47□□□□□ -1.21
LINC00440-201ENST00000446579 RAD18Q9NS91 495 aa7.47□□□□□ -1.21
LINC00440-201ENST00000446579 GIPC1O14908 333 aa7.46□□□□□ -1.22
LINC00440-201ENST00000446579 ADH5P11766 374 aa7.46□□□□□ -1.22
LINC00440-201ENST00000446579 MAOBP27338 520 aa7.46□□□□□ -1.22
LINC00440-201ENST00000446579 ADMP35318 185 aa7.46□□□□□ -1.22
LINC00440-201ENST00000446579 FCGRTP55899 365 aa7.46□□□□□ -1.22
LINC00440-201ENST00000446579 RAD51AP2Q09MP3 1159 aa7.46□□□□□ -1.22
LINC00440-201ENST00000446579 POU4F3Q15319 338 aa7.46□□□□□ -1.22
LINC00440-201ENST00000446579 NAALADL2Q58DX5 795 aa7.46□□□□□ -1.22
LINC00440-201ENST00000446579 AKAP4Q5JQC9 854 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms