RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 ZMYM1Q5SVZ6 1142 aa9.09□□□□□ -0.95
SF3A3P1-201ENST00000446317 PRAMEF18Q5VWM3 479 aa9.09□□□□□ -0.95
SF3A3P1-201ENST00000446317 ZFPM1Q8IX07 1006 aa9.09□□□□□ -0.95
SF3A3P1-201ENST00000446317 ZGPATQ8N5A5 531 aaKnown RBP9.09□□□□□ -0.95
SF3A3P1-201ENST00000446317 TGFBRAP1Q8WUH2 860 aa9.09□□□□□ -0.95
SF3A3P1-201ENST00000446317 APPBP2Q92624 585 aa9.09□□□□□ -0.95
SF3A3P1-201ENST00000446317 TEKT1Q969V4 418 aa9.09□□□□□ -0.95
SF3A3P1-201ENST00000446317 AIDAQ96BJ3 306 aa9.09□□□□□ -0.95
SF3A3P1-201ENST00000446317 GMLQ99445 158 aa9.09□□□□□ -0.95
SF3A3P1-201ENST00000446317 VPS33BQ9H267 617 aa9.09□□□□□ -0.95
SF3A3P1-201ENST00000446317 MYOZ2Q9NPC6 264 aa9.09□□□□□ -0.95
SF3A3P1-201ENST00000446317 NMRK2Q9NPI5 230 aa9.09□□□□□ -0.95
SF3A3P1-201ENST00000446317 ANO2Q9NQ90 1003 aa9.09□□□□□ -0.95
SF3A3P1-201ENST00000446317 SLC4A4Q9Y6R1 1079 aa9.09□□□□□ -0.95
SF3A3P1-201ENST00000446317 SALL1Q9NSC2 1324 aa9.09□□□□□ -0.95
SF3A3P1-201ENST00000446317 HAND2P61296 217 aa9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 NFIAQ12857 509 aa9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 DLGAP5Q15398 846 aa9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 KIF4BQ2VIQ3 1234 aa9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 ZSCAN25Q6NSZ9 544 aa9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 CDC42EP5Q6NZY7 148 aa9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 CDAN1Q8IWY9 1227 aa9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 TEX11Q8IYF3 940 aa9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 GPC2Q8N158 579 aa9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 OGFOD1Q8N543 542 aa9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 NOL10Q9BSC4 688 aaKnown RBP9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 GPRC5DQ9NZD1 345 aa9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 HDAC9Q9UKV0 1011 aa9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 AK9Q5TCS8 1911 aa9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 DOCK2Q92608 1830 aa9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 LMOD1P29536 600 aaPredicted RBP9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 USP5P45974 858 aa9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 HIRAP54198 1017 aaPredicted RBP9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 GSTO1P78417 241 aa9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 MCMDC2Q4G0Z9 681 aa9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 APOBEC3HQ6NTF7 200 aaKnown RBP9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 DPY19L2Q6NUT2 758 aa9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 CASC1Q6TDU7 716 aa9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 DDX4Q9NQI0 724 aaKnown RBP9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 INCENPQ9NQS7 918 aa9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 FZD1Q9UP38 647 aa9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 CLEC11AQ9Y240 323 aa9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 TAF6LQ9Y6J9 622 aa9.08□□□□□ -0.96
SF3A3P1-201ENST00000446317 PDS5AQ29RF7 1337 aaKnown RBP9.07□□□□□ -0.96
SF3A3P1-201ENST00000446317 CCDC171Q6TFL3 1326 aa9.07□□□□□ -0.96
SF3A3P1-201ENST00000446317 MAST2Q6P0Q8 1798 aa9.07□□□□□ -0.96
SF3A3P1-201ENST00000446317 GLTPD2A6NH11 291 aa9.07□□□□□ -0.96
SF3A3P1-201ENST00000446317 FAM196BA6NMK8 535 aa9.07□□□□□ -0.96
SF3A3P1-201ENST00000446317 MINDY4BA8MYZ0 360 aa9.07□□□□□ -0.96
SF3A3P1-201ENST00000446317 H7C1D1 291 aa9.07□□□□□ -0.96
SF3A3P1-201ENST00000446317 FOXP2O15409 715 aa9.07□□□□□ -0.96
SF3A3P1-201ENST00000446317 SGSM2O43147 1006 aa9.07□□□□□ -0.96
SF3A3P1-201ENST00000446317 FMR1Q06787 632 aaKnown RBP eCLIP9.07□□□□□ -0.96
SF3A3P1-201ENST00000446317 UBE3CQ15386 1083 aa9.07□□□□□ -0.96
SF3A3P1-201ENST00000446317 ANGEL2Q5VTE6 544 aaKnown RBP9.07□□□□□ -0.96
SF3A3P1-201ENST00000446317 AGBL3Q8NEM8 1001 aa9.07□□□□□ -0.96
SF3A3P1-201ENST00000446317 STRBPQ96SI9 672 aaKnown RBP9.07□□□□□ -0.96
SF3A3P1-201ENST00000446317 RIOK1Q9BRS2 568 aaKnown RBP9.07□□□□□ -0.96
SF3A3P1-201ENST00000446317 EPB41L4AQ9HCS5 686 aaPredicted RBP9.07□□□□□ -0.96
SF3A3P1-201ENST00000446317 SPDYE2BA6NHP3 402 aa9.06□□□□□ -0.96
SF3A3P1-201ENST00000446317 POTECB2RU33 542 aa9.06□□□□□ -0.96
SF3A3P1-201ENST00000446317 ADM5C9JUS6 153 aa9.06□□□□□ -0.96
SF3A3P1-201ENST00000446317 WNT10BO00744 389 aa9.06□□□□□ -0.96
SF3A3P1-201ENST00000446317 LDHCP07864 332 aa9.06□□□□□ -0.96
SF3A3P1-201ENST00000446317 ZFYP08048 801 aaPredicted RBP9.06□□□□□ -0.96
SF3A3P1-201ENST00000446317 SPDYE6P0CI01 402 aa9.06□□□□□ -0.96
SF3A3P1-201ENST00000446317 EPHX2P34913 555 aa9.06□□□□□ -0.96
SF3A3P1-201ENST00000446317 TDO2P48775 406 aa9.06□□□□□ -0.96
SF3A3P1-201ENST00000446317 RHBDL3P58872 404 aa9.06□□□□□ -0.96
SF3A3P1-201ENST00000446317 CTDSPL2Q05D32 466 aa9.06□□□□□ -0.96
SF3A3P1-201ENST00000446317 PRKG1Q13976 671 aa9.06□□□□□ -0.96
SF3A3P1-201ENST00000446317 ZSCAN29Q8IWY8 852 aaPredicted RBP9.06□□□□□ -0.96
SF3A3P1-201ENST00000446317 HELLSQ9NRZ9 838 aa9.06□□□□□ -0.96
SF3A3P1-201ENST00000446317 GGA3Q9NZ52 723 aa9.06□□□□□ -0.96
SF3A3P1-201ENST00000446317 ZNF70Q9UC06 446 aaPredicted RBP9.06□□□□□ -0.96
SF3A3P1-201ENST00000446317 HACL1Q9UJ83 578 aa9.06□□□□□ -0.96
SF3A3P1-201ENST00000446317 PALD1Q9ULE6 856 aa9.06□□□□□ -0.96
SF3A3P1-201ENST00000446317 GAKO14976 1311 aa9.06□□□□□ -0.96
SF3A3P1-201ENST00000446317 MYO3BQ8WXR4 1341 aa9.06□□□□□ -0.96
SF3A3P1-201ENST00000446317 MYH2Q9UKX2 1941 aa9.05□□□□□ -0.96
SF3A3P1-201ENST00000446317 DICER1Q9UPY3 1922 aaKnown RBP9.05□□□□□ -0.96
SF3A3P1-201ENST00000446317 GPR75-ASB3A0A0A6YYF3 556 aa9.05□□□□□ -0.96
SF3A3P1-201ENST00000446317 GSG1L2A8MUP6 293 aa9.05□□□□□ -0.96
SF3A3P1-201ENST00000446317 HIP1O00291 1037 aa9.05□□□□□ -0.96
SF3A3P1-201ENST00000446317 HSPD1P10809 573 aaKnown RBP9.05□□□□□ -0.96
SF3A3P1-201ENST00000446317 RPS12P25398 132 aaKnown RBP9.05□□□□□ -0.96
SF3A3P1-201ENST00000446317 ZNF280AP59817 542 aaPredicted RBP9.05□□□□□ -0.96
SF3A3P1-201ENST00000446317 FKBP1AP62942 108 aaKnown RBP9.05□□□□□ -0.96
SF3A3P1-201ENST00000446317 COL9A3Q14050 684 aaPredicted RBP9.05□□□□□ -0.96
SF3A3P1-201ENST00000446317 KIAA1211Q6ZU35 1233 aa9.05□□□□□ -0.96
SF3A3P1-201ENST00000446317 RUFY2Q8WXA3 655 aa9.05□□□□□ -0.96
SF3A3P1-201ENST00000446317 CHMP4CQ96CF2 233 aa9.05□□□□□ -0.96
SF3A3P1-201ENST00000446317 DYNLL2Q96FJ2 89 aa9.05□□□□□ -0.96
SF3A3P1-201ENST00000446317 ZDHHC15Q96MV8 337 aa9.05□□□□□ -0.96
SF3A3P1-201ENST00000446317 CRNKL1Q9BZJ0 848 aaKnown RBP9.05□□□□□ -0.96
SF3A3P1-201ENST00000446317 TMEM39BQ9GZU3 492 aa9.05□□□□□ -0.96
SF3A3P1-201ENST00000446317 LSG1Q9H089 658 aaKnown RBP9.05□□□□□ -0.96
SF3A3P1-201ENST00000446317 FAM198AQ9UFP1 575 aa9.05□□□□□ -0.96
SF3A3P1-201ENST00000446317 SERPINA10Q9UK55 444 aa9.05□□□□□ -0.96
SF3A3P1-201ENST00000446317 RBM8AQ9Y5S9 174 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms