RNA–Protein interactions for RNA: ENST00000446225.5

MCF2-206, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-206ENST00000446225 HRH3Q9Y5N1 445 aa8.09□□□□□ -1.11
MCF2-206ENST00000446225 IQGAP1P46940 1657 aa8.09□□□□□ -1.11
MCF2-206ENST00000446225 SH3BP5O60239 455 aa8.09□□□□□ -1.11
MCF2-206ENST00000446225 KCNA6P17658 529 aa8.09□□□□□ -1.11
MCF2-206ENST00000446225 GNALP38405 381 aa8.09□□□□□ -1.11
MCF2-206ENST00000446225 C4orf46Q504U0 113 aa8.09□□□□□ -1.11
MCF2-206ENST00000446225 C1orf53Q5VUE5 145 aa8.09□□□□□ -1.11
MCF2-206ENST00000446225 SPTY2D1Q68D10 685 aaPredicted RBP8.09□□□□□ -1.11
MCF2-206ENST00000446225 PRPF40BQ6NWY9 871 aaKnown RBP8.09□□□□□ -1.11
MCF2-206ENST00000446225 GALNT12Q8IXK2 581 aa8.09□□□□□ -1.11
MCF2-206ENST00000446225 GOLM1Q8NBJ4 401 aa8.09□□□□□ -1.11
MCF2-206ENST00000446225 ELP3Q9H9T3 547 aa8.09□□□□□ -1.11
MCF2-206ENST00000446225 PPP4R2Q9NY27 417 aa8.09□□□□□ -1.11
MCF2-206ENST00000446225 TMEM63CQ9P1W3 806 aa8.09□□□□□ -1.11
MCF2-206ENST00000446225 USP20Q9Y2K6 914 aa8.09□□□□□ -1.11
MCF2-206ENST00000446225 FBXO24O75426 580 aa8.08□□□□□ -1.12
MCF2-206ENST00000446225 ASMTLO95671 621 aa8.08□□□□□ -1.12
MCF2-206ENST00000446225 GRM5P41594 1212 aa8.08□□□□□ -1.12
MCF2-206ENST00000446225 SEPT6Q14141 434 aa8.08□□□□□ -1.12
MCF2-206ENST00000446225 GRIN2CQ14957 1233 aa8.08□□□□□ -1.12
MCF2-206ENST00000446225 TRIP4Q15650 581 aaPredicted RBP8.08□□□□□ -1.12
MCF2-206ENST00000446225 PPP1R26Q5T8A7 1209 aaPredicted RBP8.08□□□□□ -1.12
MCF2-206ENST00000446225 PHC3Q8NDX5 983 aa8.08□□□□□ -1.12
MCF2-206ENST00000446225 NKD1Q969G9 470 aa8.08□□□□□ -1.12
MCF2-206ENST00000446225 FAM126AQ9BYI3 521 aaPredicted RBP8.08□□□□□ -1.12
MCF2-206ENST00000446225 PLAAQ9Y263 795 aa8.08□□□□□ -1.12
MCF2-206ENST00000446225 CD2APQ9Y5K6 639 aa8.08□□□□□ -1.12
MCF2-206ENST00000446225 METP08581 1390 aa8.08□□□□□ -1.12
MCF2-206ENST00000446225 LTBP4Q8N2S1 1624 aa8.08□□□□□ -1.12
MCF2-206ENST00000446225 TGFBR3LH3BV60 316 aa8.07□□□□□ -1.12
MCF2-206ENST00000446225 EIF6P56537 245 aaKnown RBP8.07□□□□□ -1.12
MCF2-206ENST00000446225 SNAP47Q5SQN1 464 aa8.07□□□□□ -1.12
MCF2-206ENST00000446225 CCDC116Q8IYX3 515 aa8.07□□□□□ -1.12
MCF2-206ENST00000446225 STAC3Q96MF2 364 aa8.07□□□□□ -1.12
MCF2-206ENST00000446225 RBSNQ9H1K0 784 aa8.07□□□□□ -1.12
MCF2-206ENST00000446225 UBAP1LF5GYI3 381 aa8.07□□□□□ -1.12
MCF2-206ENST00000446225 EREGO14944 169 aa8.07□□□□□ -1.12
MCF2-206ENST00000446225 ALDH1L1O75891 902 aa8.07□□□□□ -1.12
MCF2-206ENST00000446225 PF4P02776 101 aa8.07□□□□□ -1.12
MCF2-206ENST00000446225 GARTP22102 1010 aa8.07□□□□□ -1.12
MCF2-206ENST00000446225 TEX2Q8IWB9 1127 aa8.07□□□□□ -1.12
MCF2-206ENST00000446225 GLIS3Q8NEA6 775 aa8.07□□□□□ -1.12
MCF2-206ENST00000446225 TERF2IPQ9NYB0 399 aa8.07□□□□□ -1.12
MCF2-206ENST00000446225 PTCH2Q9Y6C5 1203 aa8.07□□□□□ -1.12
MCF2-206ENST00000446225 COMMD10Q9Y6G5 202 aa8.07□□□□□ -1.12
MCF2-206ENST00000446225 HRO43593 1189 aa8.06□□□□□ -1.12
MCF2-206ENST00000446225 PLIN1O60240 522 aa8.06□□□□□ -1.12
MCF2-206ENST00000446225 S1PR4O95977 384 aa8.06□□□□□ -1.12
MCF2-206ENST00000446225 TMEM132EQ6IEE7 984 aa8.06□□□□□ -1.12
MCF2-206ENST00000446225 SLITRK4Q8IW52 837 aa8.06□□□□□ -1.12
MCF2-206ENST00000446225 SYNPOQ8N3V7 929 aa8.06□□□□□ -1.12
MCF2-206ENST00000446225 CDK15Q96Q40 435 aa8.06□□□□□ -1.12
MCF2-206ENST00000446225 NIFKQ9BYG3 293 aaKnown RBP8.06□□□□□ -1.12
MCF2-206ENST00000446225 C14orf93Q9H972 538 aaKnown RBP8.06□□□□□ -1.12
MCF2-206ENST00000446225 PFDN2Q9UHV9 154 aa8.06□□□□□ -1.12
MCF2-206ENST00000446225 KDM2BQ8NHM5 1336 aa8.06□□□□□ -1.12
MCF2-206ENST00000446225 POTEB2H3BUK9 544 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 TXLNAP40222 546 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 IDH3AP50213 366 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 FCGRTP55899 365 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 SETQ01105 290 aaPredicted RBP8.05□□□□□ -1.12
MCF2-206ENST00000446225 CENPCQ03188 943 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 CLN3Q13286 438 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 OS9Q13438 667 aaPredicted RBP8.05□□□□□ -1.12
MCF2-206ENST00000446225 CAMK2GQ13555 558 aaPredicted RBP8.05□□□□□ -1.12
MCF2-206ENST00000446225 NFE2Q16621 373 aaPredicted RBP8.05□□□□□ -1.12
MCF2-206ENST00000446225 HIF1AQ16665 826 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 CTC1Q2NKJ3 1217 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 FBXW10Q5XX13 1052 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 LARP1BQ659C4 914 aaKnown RBP8.05□□□□□ -1.12
MCF2-206ENST00000446225 ZNF687Q8N1G0 1237 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 CHAC2Q8WUX2 184 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 MTRQ99707 1265 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 FHDC1Q9C0D6 1143 aaPredicted RBP8.05□□□□□ -1.12
MCF2-206ENST00000446225 CHRDQ9H2X0 955 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 PPM1HQ9ULR3 514 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 TRAK1Q9UPV9 953 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 PTPRUQ92729 1446 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 PPLO60437 1756 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 SETBP1Q9Y6X0 1596 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 TSPAN6O43657 245 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 POU3F3P20264 500 aaPredicted RBP8.05□□□□□ -1.12
MCF2-206ENST00000446225 GIPRP48546 466 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 EPHB1P54762 984 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 TTF1Q15361 905 aaPredicted RBP8.05□□□□□ -1.12
MCF2-206ENST00000446225 FXNQ16595 210 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 C21orf62-AS1Q17RA5 79 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 SEZ6Q53EL9 994 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 MAMSTRQ6ZN01 415 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 CMTR1Q8N1G2 835 aaKnown RBP8.05□□□□□ -1.12
MCF2-206ENST00000446225 JMYQ8N9B5 988 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 CRBNQ96SW2 442 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 EHD4Q9H223 541 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 STK26Q9P289 416 aa8.05□□□□□ -1.12
MCF2-206ENST00000446225 NRXN3Q9Y4C0 1643 aa8.04□□□□□ -1.12
MCF2-206ENST00000446225 A0A0U1RQG5 324 aaPredicted RBP8.04□□□□□ -1.12
MCF2-206ENST00000446225 KCNQ2O43526 872 aa8.04□□□□□ -1.12
MCF2-206ENST00000446225 DIAPH1O60610 1272 aaKnown RBP8.04□□□□□ -1.12
MCF2-206ENST00000446225 CAND2O75155 1236 aa8.04□□□□□ -1.12
MCF2-206ENST00000446225 LIG3P49916 1009 aa8.04□□□□□ -1.12
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