RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 YY1P25490 414 aa15.84■□□□□ 0.13
TIMP1-204ENST00000445623 PPP4CP60510 307 aa15.84■□□□□ 0.13
TIMP1-204ENST00000445623 APOBEC3HQ6NTF7 200 aaKnown RBP15.84■□□□□ 0.13
TIMP1-204ENST00000445623 ADGRA1Q86SQ6 560 aa15.84■□□□□ 0.13
TIMP1-204ENST00000445623 MIGA1Q8NAN2 632 aa15.84■□□□□ 0.13
TIMP1-204ENST00000445623 TAF1DQ9H5J8 278 aaPredicted RBP15.84■□□□□ 0.13
TIMP1-204ENST00000445623 RRAGCQ9HB90 399 aa15.84■□□□□ 0.13
TIMP1-204ENST00000445623 GPBP1L1Q9HC44 474 aaPredicted RBP15.84■□□□□ 0.13
TIMP1-204ENST00000445623 AATFQ9NY61 560 aaKnown RBP eCLIP15.84■□□□□ 0.13
TIMP1-204ENST00000445623 RAD50Q92878 1312 aa15.84■□□□□ 0.13
TIMP1-204ENST00000445623 CHMLP26374 656 aa15.83■□□□□ 0.12
TIMP1-204ENST00000445623 NMIQ13287 307 aaPredicted RBP15.83■□□□□ 0.12
TIMP1-204ENST00000445623 MCMDC2Q4G0Z9 681 aa15.83■□□□□ 0.12
TIMP1-204ENST00000445623 CWC27Q6UX04 472 aaKnown RBP15.83■□□□□ 0.12
TIMP1-204ENST00000445623 TRPM4Q8TD43 1214 aa15.83■□□□□ 0.12
TIMP1-204ENST00000445623 OSBP2Q969R2 916 aa15.83■□□□□ 0.12
TIMP1-204ENST00000445623 ZBED3Q96IU2 234 aaPredicted RBP15.83■□□□□ 0.12
TIMP1-204ENST00000445623 PRMT6Q96LA8 375 aaPredicted RBP15.83■□□□□ 0.12
TIMP1-204ENST00000445623 USP40Q9NVE5 1235 aa15.83■□□□□ 0.12
TIMP1-204ENST00000445623 POTECB2RU33 542 aa15.82■□□□□ 0.12
TIMP1-204ENST00000445623 MBD4O95243 580 aa15.82■□□□□ 0.12
TIMP1-204ENST00000445623 GNAT2P19087 354 aa15.82■□□□□ 0.12
TIMP1-204ENST00000445623 SPDYE2Q495Y8 402 aa15.82■□□□□ 0.12
TIMP1-204ENST00000445623 EAPPQ56P03 285 aaPredicted RBP15.82■□□□□ 0.12
TIMP1-204ENST00000445623 ZC3H15Q8WU90 426 aaKnown RBP15.82■□□□□ 0.12
TIMP1-204ENST00000445623 FAM227BQ96M60 508 aa15.82■□□□□ 0.12
TIMP1-204ENST00000445623 CRNKL1Q9BZJ0 848 aaKnown RBP15.82■□□□□ 0.12
TIMP1-204ENST00000445623 PUS7LQ9H0K6 701 aaKnown RBP15.82■□□□□ 0.12
TIMP1-204ENST00000445623 A0A0D9SFI3 127 aa15.81■□□□□ 0.12
TIMP1-204ENST00000445623 GPAA1O43292 621 aa15.81■□□□□ 0.12
TIMP1-204ENST00000445623 EIF5BO60841 1220 aaKnown RBP15.81■□□□□ 0.12
TIMP1-204ENST00000445623 EGFRP00533 1210 aa15.81■□□□□ 0.12
TIMP1-204ENST00000445623 CHGBP05060 677 aa15.81■□□□□ 0.12
TIMP1-204ENST00000445623 TNFAIP1Q13829 316 aa15.81■□□□□ 0.12
TIMP1-204ENST00000445623 NBPF9Q3BBW0 867 aa15.81■□□□□ 0.12
TIMP1-204ENST00000445623 SLFNL1Q499Z3 407 aa15.81■□□□□ 0.12
TIMP1-204ENST00000445623 CDC42EP5Q6NZY7 148 aa15.81■□□□□ 0.12
TIMP1-204ENST00000445623 TEX11Q8IYF3 940 aa15.81■□□□□ 0.12
TIMP1-204ENST00000445623 DDRGK1Q96HY6 314 aa15.81■□□□□ 0.12
TIMP1-204ENST00000445623 RIOK1Q9BRS2 568 aaKnown RBP15.81■□□□□ 0.12
TIMP1-204ENST00000445623 TDRD3Q9H7E2 651 aaKnown RBP15.81■□□□□ 0.12
TIMP1-204ENST00000445623 NMRK2Q9NPI5 230 aa15.81■□□□□ 0.12
TIMP1-204ENST00000445623 ZNF70Q9UC06 446 aaPredicted RBP15.81■□□□□ 0.12
TIMP1-204ENST00000445623 PCDHAC2Q9Y5I4 1007 aa15.81■□□□□ 0.12
TIMP1-204ENST00000445623 CCDC171Q6TFL3 1326 aa15.8■□□□□ 0.12
TIMP1-204ENST00000445623 PITPNM2Q9BZ72 1349 aa15.8■□□□□ 0.12
TIMP1-204ENST00000445623 CLRN2A0PK11 232 aa15.8■□□□□ 0.12
TIMP1-204ENST00000445623 M0R2C6 588 aa15.8■□□□□ 0.12
TIMP1-204ENST00000445623 USP5P45974 858 aa15.8■□□□□ 0.12
TIMP1-204ENST00000445623 TNNI2P48788 182 aa15.8■□□□□ 0.12
TIMP1-204ENST00000445623 RHBDL3P58872 404 aa15.8■□□□□ 0.12
TIMP1-204ENST00000445623 DYNLL1P63167 89 aaKnown RBP15.8■□□□□ 0.12
TIMP1-204ENST00000445623 APOBEC3FQ8IUX4 373 aaKnown RBP15.8■□□□□ 0.12
TIMP1-204ENST00000445623 LCORLQ8N3X6 602 aa15.8■□□□□ 0.12
TIMP1-204ENST00000445623 SH3RF3Q8TEJ3 882 aaPredicted RBP15.8■□□□□ 0.12
TIMP1-204ENST00000445623 DCPSQ96C86 337 aaKnown RBP15.8■□□□□ 0.12
TIMP1-204ENST00000445623 SEC62Q99442 399 aaKnown RBP15.8■□□□□ 0.12
TIMP1-204ENST00000445623 ARMT1Q9H993 441 aa15.8■□□□□ 0.12
TIMP1-204ENST00000445623 VEZTQ9HBM0 779 aa15.8■□□□□ 0.12
TIMP1-204ENST00000445623 FOCADQ5VW36 1801 aa15.8■□□□□ 0.12
TIMP1-204ENST00000445623 RPAP1Q9BWH6 1393 aaPredicted RBP15.79■□□□□ 0.12
TIMP1-204ENST00000445623 HIRAP54198 1017 aaPredicted RBP15.79■□□□□ 0.12
TIMP1-204ENST00000445623 ANGEL2Q5VTE6 544 aaKnown RBP15.79■□□□□ 0.12
TIMP1-204ENST00000445623 FKBP1CQ5VVH2 108 aa15.79■□□□□ 0.12
TIMP1-204ENST00000445623 STRBPQ96SI9 672 aaKnown RBP15.79■□□□□ 0.12
TIMP1-204ENST00000445623 GGA3Q9NZ52 723 aa15.79■□□□□ 0.12
TIMP1-204ENST00000445623 CLEC11AQ9Y240 323 aa15.79■□□□□ 0.12
TIMP1-204ENST00000445623 SLC4A4Q9Y6R1 1079 aa15.79■□□□□ 0.12
TIMP1-204ENST00000445623 CDK5RAP2Q96SN8 1893 aa15.79■□□□□ 0.12
TIMP1-204ENST00000445623 SGSM2O43147 1006 aa15.78■□□□□ 0.12
TIMP1-204ENST00000445623 NPM3O75607 178 aaKnown RBP15.78■□□□□ 0.12
TIMP1-204ENST00000445623 LDHDQ86WU2 507 aa15.78■□□□□ 0.12
TIMP1-204ENST00000445623 IDI2Q9BXS1 227 aa15.78■□□□□ 0.12
TIMP1-204ENST00000445623 NACAP1Q9BZK3 213 aa15.78■□□□□ 0.12
TIMP1-204ENST00000445623 ATP8A2Q9NTI2 1148 aa15.78■□□□□ 0.12
TIMP1-204ENST00000445623 NAV1Q8NEY1 1877 aa15.78■□□□□ 0.12
TIMP1-204ENST00000445623 ENTPD3O75355 529 aa15.77■□□□□ 0.12
TIMP1-204ENST00000445623 PICALMQ13492 652 aa15.77■□□□□ 0.12
TIMP1-204ENST00000445623 CCDC129Q6ZRS4 1044 aa15.77■□□□□ 0.12
TIMP1-204ENST00000445623 KIAA1211Q6ZU35 1233 aa15.77■□□□□ 0.12
TIMP1-204ENST00000445623 SULF1Q8IWU6 871 aa15.77■□□□□ 0.12
TIMP1-204ENST00000445623 TGFBRAP1Q8WUH2 860 aa15.77■□□□□ 0.12
TIMP1-204ENST00000445623 ESYT1Q9BSJ8 1104 aa15.77■□□□□ 0.12
TIMP1-204ENST00000445623 TCP10L2B9ZVM9 353 aa15.76■□□□□ 0.11
TIMP1-204ENST00000445623 PATL2C9JE40 543 aaKnown RBP15.76■□□□□ 0.11
TIMP1-204ENST00000445623 WDHD1O75717 1129 aaPredicted RBP15.76■□□□□ 0.11
TIMP1-204ENST00000445623 APPP05067 770 aa15.76■□□□□ 0.11
TIMP1-204ENST00000445623 GIMAP6Q6P9H5 292 aa15.76■□□□□ 0.11
TIMP1-204ENST00000445623 ZNF589Q86UQ0 364 aaPredicted RBP15.76■□□□□ 0.11
TIMP1-204ENST00000445623 FAM83AQ86UY5 434 aa15.76■□□□□ 0.11
TIMP1-204ENST00000445623 AMOTL1Q8IY63 956 aa15.76■□□□□ 0.11
TIMP1-204ENST00000445623 PGAP2Q9UHJ9 254 aa15.76■□□□□ 0.11
TIMP1-204ENST00000445623 PPP2R3BQ9Y5P8 575 aa15.76■□□□□ 0.11
TIMP1-204ENST00000445623 FLT1P17948 1338 aa15.75■□□□□ 0.11
TIMP1-204ENST00000445623 CACNB3P54284 484 aa15.75■□□□□ 0.11
TIMP1-204ENST00000445623 MAPKAPK5Q8IW41 473 aa15.75■□□□□ 0.11
TIMP1-204ENST00000445623 SDR42E1Q8WUS8 393 aa15.75■□□□□ 0.11
TIMP1-204ENST00000445623 FAM151AQ8WW52 585 aa15.75■□□□□ 0.11
TIMP1-204ENST00000445623 OSBPL5Q9H0X9 879 aaPredicted RBP15.75■□□□□ 0.11
TIMP1-204ENST00000445623 POLR2AP24928 1970 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms