RNA–Protein interactions for RNA: ENST00000445464.1

AP000688.3-201, humanhuman

TSL 3 BASIC

Gene AP000688.3, Length 348 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000688.3-201ENST00000445464 RPS12P25398 132 aaKnown RBP11.53□□□□□ -0.56
AP000688.3-201ENST00000445464 CASP7P55210 303 aa11.53□□□□□ -0.56
AP000688.3-201ENST00000445464 BEND3Q5T5X7 828 aa11.53□□□□□ -0.56
AP000688.3-201ENST00000445464 ZC3H15Q8WU90 426 aaKnown RBP11.53□□□□□ -0.56
AP000688.3-201ENST00000445464 C9orf78Q9NZ63 289 aaPredicted RBP11.53□□□□□ -0.56
AP000688.3-201ENST00000445464 MINPP1Q9UNW1 487 aa11.53□□□□□ -0.56
AP000688.3-201ENST00000445464 ANKRD18BA2A2Z9 1011 aa11.52□□□□□ -0.57
AP000688.3-201ENST00000445464 KDM4AO75164 1064 aa11.52□□□□□ -0.57
AP000688.3-201ENST00000445464 ALDH1L1O75891 902 aa11.52□□□□□ -0.57
AP000688.3-201ENST00000445464 CCT4P50991 539 aaKnown RBP11.52□□□□□ -0.57
AP000688.3-201ENST00000445464 USP46P62068 366 aa11.52□□□□□ -0.57
AP000688.3-201ENST00000445464 DEFB115Q30KQ5 88 aa11.52□□□□□ -0.57
AP000688.3-201ENST00000445464 PODNQ7Z5L7 613 aa11.52□□□□□ -0.57
AP000688.3-201ENST00000445464 CYP4X1Q8N118 509 aa11.52□□□□□ -0.57
AP000688.3-201ENST00000445464 CRIPAKQ8N1N5 446 aa11.52□□□□□ -0.57
AP000688.3-201ENST00000445464 ANKRD2Q9GZV1 360 aa11.52□□□□□ -0.57
AP000688.3-201ENST00000445464 KCNQ5Q9NR82 932 aa11.52□□□□□ -0.57
AP000688.3-201ENST00000445464 AAASQ9NRG9 546 aa11.52□□□□□ -0.57
AP000688.3-201ENST00000445464 TOR4AQ9NXH8 423 aa11.52□□□□□ -0.57
AP000688.3-201ENST00000445464 PGAP2Q9UHJ9 254 aa11.52□□□□□ -0.57
AP000688.3-201ENST00000445464 ABT1Q9ULW3 272 aaKnown RBP11.52□□□□□ -0.57
AP000688.3-201ENST00000445464 CHMP3Q9Y3E7 222 aa11.52□□□□□ -0.57
AP000688.3-201ENST00000445464 CNTNAP1P78357 1384 aa11.52□□□□□ -0.57
AP000688.3-201ENST00000445464 PSME4Q14997 1843 aa11.51□□□□□ -0.57
AP000688.3-201ENST00000445464 SCN9AQ15858 1988 aa11.51□□□□□ -0.57
AP000688.3-201ENST00000445464 GRM8O00222 908 aa11.51□□□□□ -0.57
AP000688.3-201ENST00000445464 VIL1P09327 827 aaKnown RBP11.51□□□□□ -0.57
AP000688.3-201ENST00000445464 SLFN5Q08AF3 891 aa11.51□□□□□ -0.57
AP000688.3-201ENST00000445464 IFIT5Q13325 482 aaKnown RBP11.51□□□□□ -0.57
AP000688.3-201ENST00000445464 CDC37L1Q7L3B6 337 aa11.51□□□□□ -0.57
AP000688.3-201ENST00000445464 SRCIN1Q9C0H9 1055 aa11.51□□□□□ -0.57
AP000688.3-201ENST00000445464 LEMD3Q9Y2U8 911 aa11.51□□□□□ -0.57
AP000688.3-201ENST00000445464 ST8SIA5O15466 376 aa11.5□□□□□ -0.57
AP000688.3-201ENST00000445464 HSPA1AP0DMV8 641 aaKnown RBP11.5□□□□□ -0.57
AP000688.3-201ENST00000445464 HSPA1BP0DMV9 641 aaKnown RBP11.5□□□□□ -0.57
AP000688.3-201ENST00000445464 KCNJ4P48050 445 aa11.5□□□□□ -0.57
AP000688.3-201ENST00000445464 MMP16P51512 607 aa11.5□□□□□ -0.57
AP000688.3-201ENST00000445464 HIRAP54198 1017 aaPredicted RBP11.5□□□□□ -0.57
AP000688.3-201ENST00000445464 FOXO4P98177 505 aa11.5□□□□□ -0.57
AP000688.3-201ENST00000445464 MDM2Q00987 491 aaPredicted RBP11.5□□□□□ -0.57
AP000688.3-201ENST00000445464 TAF7LQ5H9L4 462 aa11.5□□□□□ -0.57
AP000688.3-201ENST00000445464 MED23Q9ULK4 1368 aa11.5□□□□□ -0.57
AP000688.3-201ENST00000445464 POLR2AP24928 1970 aaKnown RBP11.49□□□□□ -0.57
AP000688.3-201ENST00000445464 SHTN1A0MZ66 631 aa11.49□□□□□ -0.57
AP000688.3-201ENST00000445464 USP17L3A6NCW0 530 aa11.49□□□□□ -0.57
AP000688.3-201ENST00000445464 USP17L4A6NCW7 530 aa11.49□□□□□ -0.57
AP000688.3-201ENST00000445464 RASSF10A6NK89 507 aa11.49□□□□□ -0.57
AP000688.3-201ENST00000445464 TRAF5O00463 557 aa11.49□□□□□ -0.57
AP000688.3-201ENST00000445464 VEGFBP49765 207 aa11.49□□□□□ -0.57
AP000688.3-201ENST00000445464 FMR1Q06787 632 aaKnown RBP eCLIP11.49□□□□□ -0.57
AP000688.3-201ENST00000445464 CHRNDQ07001 517 aa11.49□□□□□ -0.57
AP000688.3-201ENST00000445464 CCDC57Q2TAC2 916 aa11.49□□□□□ -0.57
AP000688.3-201ENST00000445464 TBC1D10BQ4KMP7 808 aaPredicted RBP11.49□□□□□ -0.57
AP000688.3-201ENST00000445464 RSBN1LQ6PCB5 846 aaPredicted RBP11.49□□□□□ -0.57
AP000688.3-201ENST00000445464 LMBR1LQ6UX01 489 aa11.49□□□□□ -0.57
AP000688.3-201ENST00000445464 USP17L1Q7RTZ2 530 aa11.49□□□□□ -0.57
AP000688.3-201ENST00000445464 AGBL3Q8NEM8 1001 aa11.49□□□□□ -0.57
AP000688.3-201ENST00000445464 TRPM4Q8TD43 1214 aa11.49□□□□□ -0.57
AP000688.3-201ENST00000445464 DCPSQ96C86 337 aaKnown RBP11.49□□□□□ -0.57
AP000688.3-201ENST00000445464 USB1Q9BQ65 265 aaKnown RBP11.49□□□□□ -0.57
AP000688.3-201ENST00000445464 GLIS2Q9BZE0 524 aaPredicted RBP11.49□□□□□ -0.57
AP000688.3-201ENST00000445464 ZNF804BA4D1E1 1349 aa11.49□□□□□ -0.57
AP000688.3-201ENST00000445464 PTPRCP08575 1304 aa11.49□□□□□ -0.57
AP000688.3-201ENST00000445464 AVPP01185 164 aa11.48□□□□□ -0.57
AP000688.3-201ENST00000445464 ECE1P42892 770 aa11.48□□□□□ -0.57
AP000688.3-201ENST00000445464 ALDH1L2Q3SY69 923 aa11.48□□□□□ -0.57
AP000688.3-201ENST00000445464 CST9Q5W186 159 aa11.48□□□□□ -0.57
AP000688.3-201ENST00000445464 COA1Q9GZY4 146 aa11.48□□□□□ -0.57
AP000688.3-201ENST00000445464 WDR33Q9C0J8 1336 aaKnown RBP11.47□□□□□ -0.57
AP000688.3-201ENST00000445464 WTIPA6NIX2 430 aaPredicted RBP11.47□□□□□ -0.57
AP000688.3-201ENST00000445464 CELF2O95319 508 aaKnown RBP11.47□□□□□ -0.57
AP000688.3-201ENST00000445464 USP17L8P0C7I0 530 aa11.47□□□□□ -0.57
AP000688.3-201ENST00000445464 CTC1Q2NKJ3 1217 aa11.47□□□□□ -0.57
AP000688.3-201ENST00000445464 KIF4BQ2VIQ3 1234 aa11.47□□□□□ -0.57
AP000688.3-201ENST00000445464 LDHAL6AQ6ZMR3 332 aa11.47□□□□□ -0.57
AP000688.3-201ENST00000445464 USP48Q86UV5 1035 aa11.47□□□□□ -0.57
AP000688.3-201ENST00000445464 SSH1Q8WYL5 1049 aa11.47□□□□□ -0.57
AP000688.3-201ENST00000445464 ZNF408Q9H9D4 720 aa11.47□□□□□ -0.57
AP000688.3-201ENST00000445464 CNNM1Q9NRU3 951 aa11.47□□□□□ -0.57
AP000688.3-201ENST00000445464 PCNTO95613 3336 aa11.47□□□□□ -0.57
AP000688.3-201ENST00000445464 A0A1B0GUL6 1792 aa11.46□□□□□ -0.57
AP000688.3-201ENST00000445464 ZNF609O15014 1411 aa11.46□□□□□ -0.57
AP000688.3-201ENST00000445464 MYO3BQ8WXR4 1341 aa11.46□□□□□ -0.57
AP000688.3-201ENST00000445464 WNT7AO00755 349 aa11.46□□□□□ -0.57
AP000688.3-201ENST00000445464 DXOO77932 396 aaKnown RBP11.46□□□□□ -0.57
AP000688.3-201ENST00000445464 CT47B1P0C2W7 299 aaPredicted RBP11.46□□□□□ -0.57
AP000688.3-201ENST00000445464 ZNF280AP59817 542 aaPredicted RBP11.46□□□□□ -0.57
AP000688.3-201ENST00000445464 TRIM32Q13049 653 aa11.46□□□□□ -0.57
AP000688.3-201ENST00000445464 EPHA10Q5JZY3 1008 aa11.46□□□□□ -0.57
AP000688.3-201ENST00000445464 CCDC102AQ96A19 550 aa11.46□□□□□ -0.57
AP000688.3-201ENST00000445464 AIDAQ96BJ3 306 aa11.46□□□□□ -0.57
AP000688.3-201ENST00000445464 TLL2Q9Y6L7 1015 aa11.46□□□□□ -0.57
AP000688.3-201ENST00000445464 TTC24A2A3L6 582 aaPredicted RBP11.45□□□□□ -0.58
AP000688.3-201ENST00000445464 TAF5LO75529 589 aa11.45□□□□□ -0.58
AP000688.3-201ENST00000445464 EGFRP00533 1210 aa11.45□□□□□ -0.58
AP000688.3-201ENST00000445464 NBPF7P0C2Y1 421 aaPredicted RBP11.45□□□□□ -0.58
AP000688.3-201ENST00000445464 CLCN1P35523 988 aa11.45□□□□□ -0.58
AP000688.3-201ENST00000445464 GRM1Q13255 1194 aa11.45□□□□□ -0.58
AP000688.3-201ENST00000445464 STRIP1Q5VSL9 837 aa11.45□□□□□ -0.58
AP000688.3-201ENST00000445464 TTLL5Q6EMB2 1281 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms