RNA–Protein interactions for RNA: ENST00000444166.1

COMMD1-203, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-203ENST00000444166 BIN2Q9UBW5 565 aaPredicted RBP12.84□□□□□ -0.35
COMMD1-203ENST00000444166 STXBP5LQ9Y2K9 1186 aa12.84□□□□□ -0.35
COMMD1-203ENST00000444166 LAMA2P24043 3122 aaKnown RBP12.84□□□□□ -0.35
COMMD1-203ENST00000444166 MGAMO43451 1857 aa12.84□□□□□ -0.35
COMMD1-203ENST00000444166 VCANP13611 3396 aa12.83□□□□□ -0.36
COMMD1-203ENST00000444166 PLIN1O60240 522 aa12.83□□□□□ -0.36
COMMD1-203ENST00000444166 FCGRTP55899 365 aa12.83□□□□□ -0.36
COMMD1-203ENST00000444166 EPHA10Q5JZY3 1008 aa12.83□□□□□ -0.36
COMMD1-203ENST00000444166 APOBEC3HQ6NTF7 200 aaKnown RBP12.83□□□□□ -0.36
COMMD1-203ENST00000444166 LDHAL6AQ6ZMR3 332 aa12.83□□□□□ -0.36
COMMD1-203ENST00000444166 DEFB123Q8N688 67 aa12.83□□□□□ -0.36
COMMD1-203ENST00000444166 TSR2Q969E8 191 aaKnown RBP12.83□□□□□ -0.36
COMMD1-203ENST00000444166 HOOK2Q96ED9 719 aa12.83□□□□□ -0.36
COMMD1-203ENST00000444166 ZDHHC15Q96MV8 337 aa12.83□□□□□ -0.36
COMMD1-203ENST00000444166 CRISPLD2Q9H0B8 497 aa12.83□□□□□ -0.36
COMMD1-203ENST00000444166 PAK6Q9NQU5 681 aaPredicted RBP12.83□□□□□ -0.36
COMMD1-203ENST00000444166 GABRQQ9UN88 632 aa12.83□□□□□ -0.36
COMMD1-203ENST00000444166 DCAF15Q66K64 600 aa12.82□□□□□ -0.36
COMMD1-203ENST00000444166 GPAT2Q6NUI2 795 aa12.82□□□□□ -0.36
COMMD1-203ENST00000444166 LMBR1LQ6UX01 489 aa12.82□□□□□ -0.36
COMMD1-203ENST00000444166 FBXO33Q7Z6M2 555 aa12.82□□□□□ -0.36
COMMD1-203ENST00000444166 TEKT1Q969V4 418 aa12.82□□□□□ -0.36
COMMD1-203ENST00000444166 PARK7Q99497 189 aaKnown RBP12.82□□□□□ -0.36
COMMD1-203ENST00000444166 MRIQ9BWK5 157 aa12.82□□□□□ -0.36
COMMD1-203ENST00000444166 ZNF341Q9BYN7 854 aa12.82□□□□□ -0.36
COMMD1-203ENST00000444166 ZNF112Q9UJU3 913 aa12.82□□□□□ -0.36
COMMD1-203ENST00000444166 CHMP3Q9Y3E7 222 aa12.82□□□□□ -0.36
COMMD1-203ENST00000444166 ADCY3O60266 1144 aa12.81□□□□□ -0.36
COMMD1-203ENST00000444166 INHAP05111 366 aa12.81□□□□□ -0.36
COMMD1-203ENST00000444166 ELNP15502 786 aa12.81□□□□□ -0.36
COMMD1-203ENST00000444166 CCDC57Q2TAC2 916 aa12.81□□□□□ -0.36
COMMD1-203ENST00000444166 TWISTNBQ3B726 338 aaPredicted RBP12.81□□□□□ -0.36
COMMD1-203ENST00000444166 LRIT3Q3SXY7 679 aa12.81□□□□□ -0.36
COMMD1-203ENST00000444166 Q7L0L9 218 aa12.81□□□□□ -0.36
COMMD1-203ENST00000444166 PXYLP1Q8TE99 480 aa12.81□□□□□ -0.36
COMMD1-203ENST00000444166 DEFB118Q96PH6 123 aa12.81□□□□□ -0.36
COMMD1-203ENST00000444166 COL25A1Q9BXS0 654 aaPredicted RBP12.81□□□□□ -0.36
COMMD1-203ENST00000444166 CNNM1Q9NRU3 951 aa12.81□□□□□ -0.36
COMMD1-203ENST00000444166 MTMR10Q9NXD2 777 aa12.81□□□□□ -0.36
COMMD1-203ENST00000444166 TMOD2Q9NZR1 351 aa12.81□□□□□ -0.36
COMMD1-203ENST00000444166 DOCK3Q8IZD9 2030 aa12.81□□□□□ -0.36
COMMD1-203ENST00000444166 CACNA1FO60840 1977 aa12.8□□□□□ -0.36
COMMD1-203ENST00000444166 CYP2C8P10632 490 aa12.8□□□□□ -0.36
COMMD1-203ENST00000444166 FLT3LGP49771 235 aa12.8□□□□□ -0.36
COMMD1-203ENST00000444166 FKBP5Q13451 457 aaPredicted RBP12.8□□□□□ -0.36
COMMD1-203ENST00000444166 IRF5Q13568 498 aa12.8□□□□□ -0.36
COMMD1-203ENST00000444166 NOL9Q5SY16 702 aaKnown RBP12.8□□□□□ -0.36
COMMD1-203ENST00000444166 BEND3Q5T5X7 828 aa12.8□□□□□ -0.36
COMMD1-203ENST00000444166 MIGA2Q7L4E1 593 aa12.8□□□□□ -0.36
COMMD1-203ENST00000444166 TBC1D22AQ8WUA7 517 aa12.8□□□□□ -0.36
COMMD1-203ENST00000444166 PAWRQ96IZ0 340 aaKnown RBP12.8□□□□□ -0.36
COMMD1-203ENST00000444166 CXCL11O14625 94 aa12.79□□□□□ -0.36
COMMD1-203ENST00000444166 TFRCP02786 760 aaKnown RBP12.79□□□□□ -0.36
COMMD1-203ENST00000444166 TAF7LQ5H9L4 462 aa12.79□□□□□ -0.36
COMMD1-203ENST00000444166 DIS3LQ8TF46 1054 aaKnown RBP12.79□□□□□ -0.36
COMMD1-203ENST00000444166 PUS3Q9BZE2 481 aaKnown RBP12.79□□□□□ -0.36
COMMD1-203ENST00000444166 IQSEC3Q9UPP2 1182 aaPredicted RBP12.79□□□□□ -0.36
COMMD1-203ENST00000444166 CHAF1AQ13111 956 aaPredicted RBP12.78□□□□□ -0.36
COMMD1-203ENST00000444166 HHIPL2Q6UWX4 724 aa12.78□□□□□ -0.36
COMMD1-203ENST00000444166 NECAB2Q7Z6G3 386 aa12.78□□□□□ -0.36
COMMD1-203ENST00000444166 FAM151AQ8WW52 585 aa12.78□□□□□ -0.36
COMMD1-203ENST00000444166 SUGT1Q9Y2Z0 365 aa12.78□□□□□ -0.36
COMMD1-203ENST00000444166 PRUNE2Q8WUY3 3088 aa12.78□□□□□ -0.36
COMMD1-203ENST00000444166 SPTBN5Q9NRC6 3674 aaKnown RBP12.77□□□□□ -0.37
COMMD1-203ENST00000444166 A0A0G2JLL6 359 aaPredicted RBP12.77□□□□□ -0.37
COMMD1-203ENST00000444166 GRM8O00222 908 aa12.77□□□□□ -0.37
COMMD1-203ENST00000444166 BCAMP50895 628 aa12.77□□□□□ -0.37
COMMD1-203ENST00000444166 PRRT2Q7Z6L0 340 aaPredicted RBP12.77□□□□□ -0.37
COMMD1-203ENST00000444166 C7orf61Q8IZ16 206 aa12.77□□□□□ -0.37
COMMD1-203ENST00000444166 ZMYND8Q9ULU4 1186 aaPredicted RBP12.77□□□□□ -0.37
COMMD1-203ENST00000444166 EYSQ5T1H1 3165 aa12.76□□□□□ -0.37
COMMD1-203ENST00000444166 F6X3S4 739 aa12.76□□□□□ -0.37
COMMD1-203ENST00000444166 TNPO2O14787 897 aaKnown RBP12.76□□□□□ -0.37
COMMD1-203ENST00000444166 MAGEA10P43363 369 aaPredicted RBP12.76□□□□□ -0.37
COMMD1-203ENST00000444166 TDHQ8IZJ6 230 aa12.76□□□□□ -0.37
COMMD1-203ENST00000444166 ANKLE1Q8NAG6 615 aa12.76□□□□□ -0.37
COMMD1-203ENST00000444166 SLC45A1Q9Y2W3 748 aa12.76□□□□□ -0.37
COMMD1-203ENST00000444166 MAST3O60307 1309 aa12.76□□□□□ -0.37
COMMD1-203ENST00000444166 MROH5Q6ZUA9 1318 aa12.76□□□□□ -0.37
COMMD1-203ENST00000444166 ATRNL1Q5VV63 1379 aa12.76□□□□□ -0.37
COMMD1-203ENST00000444166 PTPRFP10586 1907 aa12.76□□□□□ -0.37
COMMD1-203ENST00000444166 NFIAQ12857 509 aa12.75□□□□□ -0.37
COMMD1-203ENST00000444166 CCDC27Q2M243 656 aa12.75□□□□□ -0.37
COMMD1-203ENST00000444166 FASTKD5Q7L8L6 764 aaKnown RBP12.75□□□□□ -0.37
COMMD1-203ENST00000444166 VPS37DQ86XT2 251 aa12.75□□□□□ -0.37
COMMD1-203ENST00000444166 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.75□□□□□ -0.37
COMMD1-203ENST00000444166 VGLL2Q8N8G2 317 aa12.75□□□□□ -0.37
COMMD1-203ENST00000444166 KAZALD1Q96I82 304 aa12.75□□□□□ -0.37
COMMD1-203ENST00000444166 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.75□□□□□ -0.37
COMMD1-203ENST00000444166 PHF20L1A8MW92 1017 aa12.74□□□□□ -0.37
COMMD1-203ENST00000444166 CDC42EP5Q6NZY7 148 aa12.74□□□□□ -0.37
COMMD1-203ENST00000444166 FAM198AQ9UFP1 575 aa12.74□□□□□ -0.37
COMMD1-203ENST00000444166 DAGLAQ9Y4D2 1042 aa12.74□□□□□ -0.37
COMMD1-203ENST00000444166 DNAH12Q6ZR08 3092 aa12.73□□□□□ -0.37
COMMD1-203ENST00000444166 IL16Q14005 1332 aa12.73□□□□□ -0.37
COMMD1-203ENST00000444166 KIF16BQ96L93 1317 aa12.73□□□□□ -0.37
COMMD1-203ENST00000444166 AK9Q5TCS8 1911 aa12.73□□□□□ -0.37
COMMD1-203ENST00000444166 FRAT2O75474 233 aaPredicted RBP12.73□□□□□ -0.37
COMMD1-203ENST00000444166 SYN1P17600 705 aa12.73□□□□□ -0.37
COMMD1-203ENST00000444166 TCP10Q12799 353 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms