RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 AK2P54819 239 aa11.29□□□□□ -0.6
SMPD4P1-203ENST00000443839 DYNLL1P63167 89 aaKnown RBP11.29□□□□□ -0.6
SMPD4P1-203ENST00000443839 DIXDC1Q155Q3 683 aa11.29□□□□□ -0.6
SMPD4P1-203ENST00000443839 ALX1Q15699 326 aa11.29□□□□□ -0.6
SMPD4P1-203ENST00000443839 GRIK5Q16478 980 aa11.29□□□□□ -0.6
SMPD4P1-203ENST00000443839 IFNL3Q8IZI9 196 aa11.29□□□□□ -0.6
SMPD4P1-203ENST00000443839 TTC14Q96N46 770 aa11.29□□□□□ -0.6
SMPD4P1-203ENST00000443839 NOL10Q9BSC4 688 aaKnown RBP11.29□□□□□ -0.6
SMPD4P1-203ENST00000443839 ZMYM6O95789 1325 aa11.28□□□□□ -0.6
SMPD4P1-203ENST00000443839 ECE2O60344 883 aa11.28□□□□□ -0.6
SMPD4P1-203ENST00000443839 LDHCP07864 332 aa11.28□□□□□ -0.6
SMPD4P1-203ENST00000443839 RPS6KB1P23443 525 aa11.28□□□□□ -0.6
SMPD4P1-203ENST00000443839 PTGER2P43116 358 aa11.28□□□□□ -0.6
SMPD4P1-203ENST00000443839 KIAA2012Q0VF49 1180 aa11.28□□□□□ -0.6
SMPD4P1-203ENST00000443839 STOX1Q6ZVD7 989 aa11.28□□□□□ -0.6
SMPD4P1-203ENST00000443839 SLF2Q8IX21 1173 aa11.28□□□□□ -0.6
SMPD4P1-203ENST00000443839 SDR42E1Q8WUS8 393 aa11.28□□□□□ -0.6
SMPD4P1-203ENST00000443839 CRNKL1Q9BZJ0 848 aaKnown RBP11.28□□□□□ -0.6
SMPD4P1-203ENST00000443839 EPB41L4AQ9HCS5 686 aaPredicted RBP11.28□□□□□ -0.6
SMPD4P1-203ENST00000443839 KIAA1551Q9HCM1 1747 aa11.28□□□□□ -0.6
SMPD4P1-203ENST00000443839 BAG3O95817 575 aa11.27□□□□□ -0.6
SMPD4P1-203ENST00000443839 TMX3Q96JJ7 454 aa11.27□□□□□ -0.6
SMPD4P1-203ENST00000443839 TCEANC2Q96MN5 208 aa11.27□□□□□ -0.6
SMPD4P1-203ENST00000443839 PSMD1Q99460 953 aa11.27□□□□□ -0.6
SMPD4P1-203ENST00000443839 MYH2Q9UKX2 1941 aa11.27□□□□□ -0.61
SMPD4P1-203ENST00000443839 MROH7-TTC4A0A0A0MT08 1334 aa11.27□□□□□ -0.61
SMPD4P1-203ENST00000443839 FGD1P98174 961 aa11.27□□□□□ -0.61
SMPD4P1-203ENST00000443839 TRDNQ13061 729 aa11.27□□□□□ -0.61
SMPD4P1-203ENST00000443839 ANKRD1Q15327 319 aa11.27□□□□□ -0.61
SMPD4P1-203ENST00000443839 RALYLQ86SE5 291 aaKnown RBP11.27□□□□□ -0.61
SMPD4P1-203ENST00000443839 LIMCH1Q9UPQ0 1083 aa11.27□□□□□ -0.61
SMPD4P1-203ENST00000443839 SUGT1Q9Y2Z0 365 aa11.27□□□□□ -0.61
SMPD4P1-203ENST00000443839 LAMA4Q16363 1823 aa11.26□□□□□ -0.61
SMPD4P1-203ENST00000443839 F8W031 263 aaPredicted RBP11.26□□□□□ -0.61
SMPD4P1-203ENST00000443839 COL9A3Q14050 684 aaPredicted RBP11.26□□□□□ -0.61
SMPD4P1-203ENST00000443839 DHX32Q7L7V1 743 aaKnown RBP11.26□□□□□ -0.61
SMPD4P1-203ENST00000443839 SPON1Q9HCB6 807 aa11.26□□□□□ -0.61
SMPD4P1-203ENST00000443839 BRCA1P38398 1863 aaKnown RBP11.26□□□□□ -0.61
SMPD4P1-203ENST00000443839 STRIP1Q5VSL9 837 aa11.26□□□□□ -0.61
SMPD4P1-203ENST00000443839 TBC1D10CQ8IV04 446 aa11.26□□□□□ -0.61
SMPD4P1-203ENST00000443839 LARGE2Q8N3Y3 721 aa11.26□□□□□ -0.61
SMPD4P1-203ENST00000443839 CERS5Q8N5B7 392 aa11.26□□□□□ -0.61
SMPD4P1-203ENST00000443839 NCOA7Q8NI08 942 aa11.26□□□□□ -0.61
SMPD4P1-203ENST00000443839 LARP6Q9BRS8 491 aaKnown RBP11.26□□□□□ -0.61
SMPD4P1-203ENST00000443839 MXD3Q9BW11 206 aa11.26□□□□□ -0.61
SMPD4P1-203ENST00000443839 KCNQ5Q9NR82 932 aa11.26□□□□□ -0.61
SMPD4P1-203ENST00000443839 ZNF277Q9NRM2 450 aaPredicted RBP11.26□□□□□ -0.61
SMPD4P1-203ENST00000443839 TTF2Q9UNY4 1162 aaKnown RBP11.26□□□□□ -0.61
SMPD4P1-203ENST00000443839 USP17L3A6NCW0 530 aa11.25□□□□□ -0.61
SMPD4P1-203ENST00000443839 USP17L4A6NCW7 530 aa11.25□□□□□ -0.61
SMPD4P1-203ENST00000443839 BTDP43251 543 aa11.25□□□□□ -0.61
SMPD4P1-203ENST00000443839 GIMAP6Q6P9H5 292 aa11.25□□□□□ -0.61
SMPD4P1-203ENST00000443839 USP17L1Q7RTZ2 530 aa11.25□□□□□ -0.61
SMPD4P1-203ENST00000443839 CERS3Q8IU89 383 aa11.25□□□□□ -0.61
SMPD4P1-203ENST00000443839 NBPF3Q9H094 633 aa11.25□□□□□ -0.61
SMPD4P1-203ENST00000443839 ATP8A2Q9NTI2 1148 aa11.25□□□□□ -0.61
SMPD4P1-203ENST00000443839 BCS1LQ9Y276 419 aa11.25□□□□□ -0.61
SMPD4P1-203ENST00000443839 SCN9AQ15858 1988 aa11.25□□□□□ -0.61
SMPD4P1-203ENST00000443839 BAZ2AQ9UIF9 1905 aaKnown RBP11.25□□□□□ -0.61
SMPD4P1-203ENST00000443839 MINDY4BA8MYZ0 360 aa11.24□□□□□ -0.61
SMPD4P1-203ENST00000443839 USP5P45974 858 aa11.24□□□□□ -0.61
SMPD4P1-203ENST00000443839 Q6ZUG5 572 aa11.24□□□□□ -0.61
SMPD4P1-203ENST00000443839 SH3RF3Q8TEJ3 882 aaPredicted RBP11.24□□□□□ -0.61
SMPD4P1-203ENST00000443839 GPR75-ASB3A0A0A6YYF3 556 aa11.24□□□□□ -0.61
SMPD4P1-203ENST00000443839 PLCG2P16885 1265 aa11.24□□□□□ -0.61
SMPD4P1-203ENST00000443839 MCM5P33992 734 aa11.24□□□□□ -0.61
SMPD4P1-203ENST00000443839 PPP4CP60510 307 aa11.24□□□□□ -0.61
SMPD4P1-203ENST00000443839 CTDSPL2Q05D32 466 aa11.24□□□□□ -0.61
SMPD4P1-203ENST00000443839 PPARAQ07869 468 aa11.24□□□□□ -0.61
SMPD4P1-203ENST00000443839 DACT2Q5SW24 774 aa11.24□□□□□ -0.61
SMPD4P1-203ENST00000443839 ILDR2Q71H61 639 aa11.24□□□□□ -0.61
SMPD4P1-203ENST00000443839 FAM163AQ96GL9 167 aaPredicted RBP11.24□□□□□ -0.61
SMPD4P1-203ENST00000443839 ZSCAN31Q96LW9 406 aaPredicted RBP11.24□□□□□ -0.61
SMPD4P1-203ENST00000443839 LRRC2Q9BYS8 371 aa11.24□□□□□ -0.61
SMPD4P1-203ENST00000443839 ALDH8A1Q9H2A2 487 aaPredicted RBP11.24□□□□□ -0.61
SMPD4P1-203ENST00000443839 TAOK3Q9H2K8 898 aa11.24□□□□□ -0.61
SMPD4P1-203ENST00000443839 DCP1AQ9NPI6 582 aaPredicted RBP11.24□□□□□ -0.61
SMPD4P1-203ENST00000443839 GAKO14976 1311 aa11.24□□□□□ -0.61
SMPD4P1-203ENST00000443839 FKBP1AP62942 108 aaKnown RBP11.23□□□□□ -0.61
SMPD4P1-203ENST00000443839 TOB2Q14106 344 aaPredicted RBP11.23□□□□□ -0.61
SMPD4P1-203ENST00000443839 AKNAD1Q5T1N1 836 aa11.23□□□□□ -0.61
SMPD4P1-203ENST00000443839 MFSD6Q6ZSS7 791 aa11.23□□□□□ -0.61
SMPD4P1-203ENST00000443839 CHST3Q7LGC8 479 aa11.23□□□□□ -0.61
SMPD4P1-203ENST00000443839 KIAA0825Q8IV33 1275 aa11.23□□□□□ -0.61
SMPD4P1-203ENST00000443839 NLGN2Q8NFZ4 835 aa11.23□□□□□ -0.61
SMPD4P1-203ENST00000443839 VPS33BQ9H267 617 aa11.23□□□□□ -0.61
SMPD4P1-203ENST00000443839 RNF41Q9H4P4 317 aaPredicted RBP11.23□□□□□ -0.61
SMPD4P1-203ENST00000443839 CNNM2Q9H8M5 875 aa11.23□□□□□ -0.61
SMPD4P1-203ENST00000443839 SH2B1Q9NRF2 756 aaPredicted RBP11.23□□□□□ -0.61
SMPD4P1-203ENST00000443839 TOMM22Q9NS69 142 aa11.23□□□□□ -0.61
SMPD4P1-203ENST00000443839 DAGLAQ9Y4D2 1042 aa11.23□□□□□ -0.61
SMPD4P1-203ENST00000443839 USP17L12C9JPN9 530 aa11.23□□□□□ -0.61
SMPD4P1-203ENST00000443839 USP17L21D6R901 530 aa11.23□□□□□ -0.61
SMPD4P1-203ENST00000443839 SCNN1DP51172 638 aa11.23□□□□□ -0.61
SMPD4P1-203ENST00000443839 EXOSC10Q01780 885 aaKnown RBP11.23□□□□□ -0.61
SMPD4P1-203ENST00000443839 CUL4AQ13619 759 aa11.23□□□□□ -0.61
SMPD4P1-203ENST00000443839 MB21D2Q8IYB1 491 aaPredicted RBP11.23□□□□□ -0.61
SMPD4P1-203ENST00000443839 TEX11Q8IYF3 940 aa11.23□□□□□ -0.61
SMPD4P1-203ENST00000443839 STK11IPQ8N1F8 1099 aa11.23□□□□□ -0.61
SMPD4P1-203ENST00000443839 BRF1Q92994 677 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms