RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 PHF14O94880 888 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 BAG4O95429 457 aaKnown RBP3.32□□□□□ -1.88
LINC00393-201ENST00000443621 LDHBP07195 334 aaKnown RBP3.32□□□□□ -1.88
LINC00393-201ENST00000443621 ZSCAN22P10073 491 aaPredicted RBP3.32□□□□□ -1.88
LINC00393-201ENST00000443621 NCLP19338 710 aaKnown RBP3.32□□□□□ -1.88
LINC00393-201ENST00000443621 SYT1P21579 422 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 NOVP48745 357 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 BCAMP50895 628 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 TGFB2P61812 414 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 PDE4BQ07343 736 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 SEMA3FQ13275 785 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 SF3B2Q13435 895 aaKnown RBP3.32□□□□□ -1.88
LINC00393-201ENST00000443621 SCARF1Q14162 830 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 GSE1Q14687 1217 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 ME3Q16798 604 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 L1TD1Q5T7N2 865 aaKnown RBP3.32□□□□□ -1.88
LINC00393-201ENST00000443621 STRIP1Q5VSL9 837 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 LARP1BQ659C4 914 aaKnown RBP3.32□□□□□ -1.88
LINC00393-201ENST00000443621 HHIPL2Q6UWX4 724 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 PPP4R3CPQ6ZMV5 832 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 SYNE3Q6ZMZ3 975 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 MFSD6Q6ZSS7 791 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 Q6ZUG5 572 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 PTF1AQ7RTS3 328 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 BRAPQ7Z569 592 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 IQCA1Q86XH1 822 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 DGKHQ86XP1 1220 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 COL23A1Q86Y22 540 aaPredicted RBP3.32□□□□□ -1.88
LINC00393-201ENST00000443621 ELOA2Q8IYF1 753 aaPredicted RBP3.32□□□□□ -1.88
LINC00393-201ENST00000443621 RTKN2Q8IZC4 609 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 MAGEB6Q8N7X4 407 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 FAM184AQ8NB25 1140 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 TBC1D16Q8TBP0 767 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 IGDCC4Q8TDY8 1250 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 SEC62Q99442 399 aaKnown RBP3.32□□□□□ -1.88
LINC00393-201ENST00000443621 PSMD1Q99460 953 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 LZTS2Q9BRK4 669 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 UPF3BQ9BZI7 483 aaKnown RBP3.32□□□□□ -1.88
LINC00393-201ENST00000443621 ZC3H12CQ9C0D7 883 aaKnown RBP3.32□□□□□ -1.88
LINC00393-201ENST00000443621 SLKQ9H2G2 1235 aaPredicted RBP3.32□□□□□ -1.88
LINC00393-201ENST00000443621 CD209Q9NNX6 404 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 FOXD4L1Q9NU39 408 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 RBM28Q9NW13 759 aaKnown RBP3.32□□□□□ -1.88
LINC00393-201ENST00000443621 STK32BQ9NY57 414 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 ANKIB1Q9P2G1 1089 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 RGS17Q9UGC6 210 aaPredicted RBP3.32□□□□□ -1.88
LINC00393-201ENST00000443621 SRP68Q9UHB9 627 aaKnown RBP3.32□□□□□ -1.88
LINC00393-201ENST00000443621 MKRN1Q9UHC7 482 aaKnown RBP3.32□□□□□ -1.88
LINC00393-201ENST00000443621 TPCN1Q9ULQ1 816 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 GAKO14976 1311 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 SNED1Q8TER0 1413 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 LAMB1P07942 1786 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 MROH7-TTC4A0A0A0MT08 1334 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 hCG_1984214I3L0E3 225 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 PPEF1O14829 653 aaPredicted RBP3.31□□□□□ -1.88
LINC00393-201ENST00000443621 PRC1O43663 620 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 TRAK2O60296 914 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 FRAT2O75474 233 aaPredicted RBP3.31□□□□□ -1.88
LINC00393-201ENST00000443621 DDAH1O94760 285 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 F13A1P00488 732 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 IFNAR1P17181 557 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 XBP1P17861 261 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 CYP7A1P22680 504 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 GJB2P29033 226 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 PDIA3P30101 505 aaKnown RBP3.31□□□□□ -1.88
LINC00393-201ENST00000443621 HOXA7P31268 230 aaPredicted RBP3.31□□□□□ -1.88
LINC00393-201ENST00000443621 SLC4A3P48751 1232 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 GNAQP50148 359 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 ZNF445P59923 1031 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 UBE2HP62256 183 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 KRT85P78386 507 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 FGD1P98174 961 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 MECOMQ03112 1051 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 PPARAQ07869 468 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 DDR1Q08345 913 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 ORC2Q13416 577 aaPredicted RBP3.31□□□□□ -1.88
LINC00393-201ENST00000443621 NBR1Q14596 966 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 FKBP1CQ5VVH2 108 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 GALNT17Q6IS24 598 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 RCSD1Q6JBY9 416 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 METTL16Q86W50 562 aaKnown RBP3.31□□□□□ -1.88
LINC00393-201ENST00000443621 MPNDQ8N594 471 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 ZNF713Q8N859 430 aaPredicted RBP3.31□□□□□ -1.88
LINC00393-201ENST00000443621 MTMR14Q8NCE2 650 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 FBXO18Q8NFZ0 1043 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 EDC3Q96F86 508 aaKnown RBP3.31□□□□□ -1.88
LINC00393-201ENST00000443621 CCDC17Q96LX7 622 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 ZNF396Q96N95 335 aaPredicted RBP3.31□□□□□ -1.88
LINC00393-201ENST00000443621 RNF26Q9BY78 433 aaPredicted RBP3.31□□□□□ -1.88
LINC00393-201ENST00000443621 MAF1Q9H063 256 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 EHD4Q9H223 541 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 DHX36Q9H2U1 1008 aaKnown RBP3.31□□□□□ -1.88
LINC00393-201ENST00000443621 DCP1AQ9NPI6 582 aaPredicted RBP3.31□□□□□ -1.88
LINC00393-201ENST00000443621 PIH1D3Q9NQM4 214 aaKnown RBP3.31□□□□□ -1.88
LINC00393-201ENST00000443621 SH3GLB2Q9NR46 395 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.31□□□□□ -1.88
LINC00393-201ENST00000443621 GINM1Q9NU53 330 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.31□□□□□ -1.88
LINC00393-201ENST00000443621 SWAP70Q9UH65 585 aa3.31□□□□□ -1.88
LINC00393-201ENST00000443621 SERPINA10Q9UK55 444 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms