RNA–Protein interactions for RNA: ENST00000442742.6

CASK-208, Transcript of calcium/calmodulin dependent serine protein kinase, humanhuman

TSL 1 (best) BASIC

Gene CASK, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASK-208ENST00000442742 IFIT3O14879 490 aaKnown RBP11.08□□□□□ -0.64
CASK-208ENST00000442742 ST5P78524 1137 aa11.08□□□□□ -0.64
CASK-208ENST00000442742 GRAPQ13588 217 aa11.08□□□□□ -0.64
CASK-208ENST00000442742 DIXDC1Q155Q3 683 aa11.08□□□□□ -0.64
CASK-208ENST00000442742 FBXO33Q7Z6M2 555 aa11.08□□□□□ -0.64
CASK-208ENST00000442742 GRAPLQ8TC17 118 aaPredicted RBP11.08□□□□□ -0.64
CASK-208ENST00000442742 ANKRD2Q9GZV1 360 aa11.08□□□□□ -0.64
CASK-208ENST00000442742 SCN7AQ01118 1682 aa11.07□□□□□ -0.64
CASK-208ENST00000442742 RIMBP2O15034 1052 aa11.07□□□□□ -0.64
CASK-208ENST00000442742 UFL1O94874 794 aa11.07□□□□□ -0.64
CASK-208ENST00000442742 POLR3DP05423 398 aaPredicted RBP11.07□□□□□ -0.64
CASK-208ENST00000442742 RBM6P78332 1123 aaKnown RBP11.07□□□□□ -0.64
CASK-208ENST00000442742 GRIK5Q16478 980 aa11.07□□□□□ -0.64
CASK-208ENST00000442742 TMEM67Q5HYA8 995 aa11.07□□□□□ -0.64
CASK-208ENST00000442742 TTC6Q86TZ1 520 aa11.07□□□□□ -0.64
CASK-208ENST00000442742 HPS5Q9UPZ3 1129 aa11.07□□□□□ -0.64
CASK-208ENST00000442742 BAZ2AQ9UIF9 1905 aaKnown RBP11.07□□□□□ -0.64
CASK-208ENST00000442742 MYH13Q9UKX3 1938 aa11.07□□□□□ -0.64
CASK-208ENST00000442742 LY75O60449 1722 aa11.07□□□□□ -0.64
CASK-208ENST00000442742 C4AP0C0L4 1744 aa11.07□□□□□ -0.64
CASK-208ENST00000442742 C6orf229H3BNL8 230 aa11.07□□□□□ -0.64
CASK-208ENST00000442742 FDPSP14324 419 aaKnown RBP11.07□□□□□ -0.64
CASK-208ENST00000442742 MRE11P49959 708 aa11.07□□□□□ -0.64
CASK-208ENST00000442742 GPSM2P81274 684 aa11.07□□□□□ -0.64
CASK-208ENST00000442742 COL23A1Q86Y22 540 aaPredicted RBP11.07□□□□□ -0.64
CASK-208ENST00000442742 FBXW7Q969H0 707 aa11.07□□□□□ -0.64
CASK-208ENST00000442742 ZNF274Q96GC6 653 aaPredicted RBP11.07□□□□□ -0.64
CASK-208ENST00000442742 AGXT2Q9BYV1 514 aa11.07□□□□□ -0.64
CASK-208ENST00000442742 ANGEL1Q9UNK9 670 aaKnown RBP11.07□□□□□ -0.64
CASK-208ENST00000442742 TNRC6CQ9HCJ0 1690 aaKnown RBP11.06□□□□□ -0.64
CASK-208ENST00000442742 KRT85P78386 507 aa11.06□□□□□ -0.64
CASK-208ENST00000442742 CAMK4Q16566 473 aa11.06□□□□□ -0.64
CASK-208ENST00000442742 SLC27A3Q5K4L6 730 aa11.06□□□□□ -0.64
CASK-208ENST00000442742 AKNAD1Q5T1N1 836 aa11.06□□□□□ -0.64
CASK-208ENST00000442742 TICAM2Q86XR7 235 aa11.06□□□□□ -0.64
CASK-208ENST00000442742 SPATA32Q96LK8 384 aa11.06□□□□□ -0.64
CASK-208ENST00000442742 GOLGA6L4A6NEF3 574 aa11.06□□□□□ -0.64
CASK-208ENST00000442742 USP17L12C9JPN9 530 aa11.06□□□□□ -0.64
CASK-208ENST00000442742 USP17L21D6R901 530 aa11.06□□□□□ -0.64
CASK-208ENST00000442742 RANBP6O60518 1105 aaKnown RBP11.06□□□□□ -0.64
CASK-208ENST00000442742 MBD3O95983 291 aa11.06□□□□□ -0.64
CASK-208ENST00000442742 DZIP1Q86YF9 867 aaKnown RBP11.06□□□□□ -0.64
CASK-208ENST00000442742 NUP133Q8WUM0 1156 aa11.06□□□□□ -0.64
CASK-208ENST00000442742 NSUN4Q96CB9 384 aaKnown RBP11.06□□□□□ -0.64
CASK-208ENST00000442742 ORC3Q9UBD5 711 aaPredicted RBP11.06□□□□□ -0.64
CASK-208ENST00000442742 CICQ96RK0 1608 aaPredicted RBP11.06□□□□□ -0.64
CASK-208ENST00000442742 ADRA2BP18089 450 aa11.05□□□□□ -0.64
CASK-208ENST00000442742 CDC27P30260 824 aa11.05□□□□□ -0.64
CASK-208ENST00000442742 METAP2P50579 478 aaKnown RBP eCLIP11.05□□□□□ -0.64
CASK-208ENST00000442742 PPARAQ07869 468 aa11.05□□□□□ -0.64
CASK-208ENST00000442742 RIOK1Q9BRS2 568 aaKnown RBP11.05□□□□□ -0.64
CASK-208ENST00000442742 RBSNQ9H1K0 784 aa11.05□□□□□ -0.64
CASK-208ENST00000442742 POLRMTO00411 1230 aaKnown RBP11.05□□□□□ -0.64
CASK-208ENST00000442742 SMARCC2Q8TAQ2 1214 aa11.05□□□□□ -0.64
CASK-208ENST00000442742 CYP2D6P10635 497 aa11.04□□□□□ -0.64
CASK-208ENST00000442742 RXRBP28702 533 aa11.04□□□□□ -0.64
CASK-208ENST00000442742 GIMAP6Q6P9H5 292 aa11.04□□□□□ -0.64
CASK-208ENST00000442742 APOA5Q6Q788 366 aa11.04□□□□□ -0.64
CASK-208ENST00000442742 IGDCC4Q8TDY8 1250 aa11.04□□□□□ -0.64
CASK-208ENST00000442742 ZNF831Q5JPB2 1677 aa11.04□□□□□ -0.64
CASK-208ENST00000442742 CCDC69A6NI79 296 aa11.04□□□□□ -0.64
CASK-208ENST00000442742 F8W031 263 aaPredicted RBP11.04□□□□□ -0.64
CASK-208ENST00000442742 SH2B2O14492 632 aaPredicted RBP11.04□□□□□ -0.64
CASK-208ENST00000442742 MMP10P09238 476 aa11.04□□□□□ -0.64
CASK-208ENST00000442742 NASPP49321 788 aaPredicted RBP11.04□□□□□ -0.64
CASK-208ENST00000442742 UBE2HP62256 183 aa11.04□□□□□ -0.64
CASK-208ENST00000442742 ZNF772Q68DY9 489 aaPredicted RBP11.04□□□□□ -0.64
CASK-208ENST00000442742 MTMR7Q9Y216 660 aa11.04□□□□□ -0.64
CASK-208ENST00000442742 SLC12A7Q9Y666 1083 aa11.04□□□□□ -0.64
CASK-208ENST00000442742 XDHP47989 1333 aa11.04□□□□□ -0.64
CASK-208ENST00000442742 hCG_1642624A0A1W2PR95 340 aa11.04□□□□□ -0.64
CASK-208ENST00000442742 ZBTB43O43298 467 aa11.04□□□□□ -0.64
CASK-208ENST00000442742 NMT2O60551 498 aa11.04□□□□□ -0.64
CASK-208ENST00000442742 GNAT2P19087 354 aa11.04□□□□□ -0.64
CASK-208ENST00000442742 LY9Q9HBG7 655 aa11.04□□□□□ -0.64
CASK-208ENST00000442742 POLLQ9UGP5 575 aa11.04□□□□□ -0.64
CASK-208ENST00000442742 MYH2Q9UKX2 1941 aa11.03□□□□□ -0.64
CASK-208ENST00000442742 UBR3Q6ZT12 1888 aa11.03□□□□□ -0.64
CASK-208ENST00000442742 ARAP2Q8WZ64 1704 aa11.03□□□□□ -0.64
CASK-208ENST00000442742 LIG1P18858 919 aa11.03□□□□□ -0.64
CASK-208ENST00000442742 HMGN5P82970 282 aaKnown RBP11.03□□□□□ -0.64
CASK-208ENST00000442742 FAM47AQ5JRC9 791 aa11.03□□□□□ -0.64
CASK-208ENST00000442742 RBM17Q96I25 401 aaKnown RBP11.03□□□□□ -0.64
CASK-208ENST00000442742 C8orf76Q96K31 380 aa11.03□□□□□ -0.64
CASK-208ENST00000442742 LLPHQ9BRT6 129 aaKnown RBP11.03□□□□□ -0.64
CASK-208ENST00000442742 PNPLA7Q6ZV29 1317 aa11.03□□□□□ -0.64
CASK-208ENST00000442742 GOLGA8AA7E2F4 631 aa11.03□□□□□ -0.64
CASK-208ENST00000442742 LDHBP07195 334 aaKnown RBP11.03□□□□□ -0.64
CASK-208ENST00000442742 RESTQ13127 1097 aa11.03□□□□□ -0.64
CASK-208ENST00000442742 BICD2Q8TD16 824 aa11.03□□□□□ -0.64
CASK-208ENST00000442742 PIBF1Q8WXW3 757 aa11.03□□□□□ -0.64
CASK-208ENST00000442742 ZNF622Q969S3 477 aaKnown RBP eCLIP11.03□□□□□ -0.64
CASK-208ENST00000442742 UBAC1Q9BSL1 405 aa11.03□□□□□ -0.64
CASK-208ENST00000442742 MCM9Q9NXL9 1143 aa11.03□□□□□ -0.64
CASK-208ENST00000442742 GGA1Q9UJY5 639 aa11.03□□□□□ -0.64
CASK-208ENST00000442742 ERICH2A1L162 156 aa11.02□□□□□ -0.65
CASK-208ENST00000442742 DHX16O60231 1041 aaKnown RBP11.02□□□□□ -0.65
CASK-208ENST00000442742 USP17L8P0C7I0 530 aa11.02□□□□□ -0.65
CASK-208ENST00000442742 EN1Q05925 392 aaPredicted RBP11.02□□□□□ -0.65
CASK-208ENST00000442742 ALX1Q15699 326 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms