RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 ZNF384Q8TF68 577 aa18.32■□□□□ 0.52
CSNK1E-210ENST00000442216 GPATCH3Q96I76 525 aa18.32■□□□□ 0.52
CSNK1E-210ENST00000442216 ZBTB47Q9UFB7 747 aaPredicted RBP18.32■□□□□ 0.52
CSNK1E-210ENST00000442216 RPAP1Q9BWH6 1393 aaPredicted RBP18.31■□□□□ 0.52
CSNK1E-210ENST00000442216 NAA16Q6N069 864 aaPredicted RBP18.31■□□□□ 0.52
CSNK1E-210ENST00000442216 SMC5Q8IY18 1101 aa18.31■□□□□ 0.52
CSNK1E-210ENST00000442216 PIH1D3Q9NQM4 214 aaKnown RBP18.31■□□□□ 0.52
CSNK1E-210ENST00000442216 ECHDC1Q9NTX5 307 aa18.31■□□□□ 0.52
CSNK1E-210ENST00000442216 CDK5RAP2Q96SN8 1893 aa18.31■□□□□ 0.52
CSNK1E-210ENST00000442216 FOCADQ5VW36 1801 aa18.3■□□□□ 0.52
CSNK1E-210ENST00000442216 TCP10L2B9ZVM9 353 aa18.3■□□□□ 0.52
CSNK1E-210ENST00000442216 MAP3K12Q12852 859 aa18.3■□□□□ 0.52
CSNK1E-210ENST00000442216 PRAMEF18Q5VWM3 479 aa18.3■□□□□ 0.52
CSNK1E-210ENST00000442216 HAUS7Q99871 368 aa18.3■□□□□ 0.52
CSNK1E-210ENST00000442216 BCL11AQ9H165 835 aa18.3■□□□□ 0.52
CSNK1E-210ENST00000442216 USP40Q9NVE5 1235 aa18.3■□□□□ 0.52
CSNK1E-210ENST00000442216 TTC41PQ6P2S7 1318 aa18.29■□□□□ 0.52
CSNK1E-210ENST00000442216 BTDP43251 543 aa18.29■□□□□ 0.52
CSNK1E-210ENST00000442216 TEPSINQ96N21 525 aa18.29■□□□□ 0.52
CSNK1E-210ENST00000442216 IDI2Q9BXS1 227 aa18.29■□□□□ 0.52
CSNK1E-210ENST00000442216 ANTXR1Q9H6X2 564 aa18.29■□□□□ 0.52
CSNK1E-210ENST00000442216 NPM3O75607 178 aaKnown RBP18.28■□□□□ 0.52
CSNK1E-210ENST00000442216 IDH1O75874 414 aaKnown RBP18.28■□□□□ 0.52
CSNK1E-210ENST00000442216 BAG3O95817 575 aa18.28■□□□□ 0.52
CSNK1E-210ENST00000442216 PLCG2P16885 1265 aa18.28■□□□□ 0.52
CSNK1E-210ENST00000442216 ECE1P42892 770 aa18.28■□□□□ 0.52
CSNK1E-210ENST00000442216 HUNKP57058 714 aa18.28■□□□□ 0.52
CSNK1E-210ENST00000442216 IRX6P78412 446 aaPredicted RBP18.28■□□□□ 0.52
CSNK1E-210ENST00000442216 MAP3K11Q16584 847 aa18.28■□□□□ 0.52
CSNK1E-210ENST00000442216 ANKRD45Q5TZF3 282 aa18.28■□□□□ 0.52
CSNK1E-210ENST00000442216 ARMC9Q7Z3E5 817 aa18.28■□□□□ 0.52
CSNK1E-210ENST00000442216 CERS3Q8IU89 383 aa18.28■□□□□ 0.52
CSNK1E-210ENST00000442216 FAM151AQ8WW52 585 aa18.28■□□□□ 0.52
CSNK1E-210ENST00000442216 HOOK2Q96ED9 719 aa18.28■□□□□ 0.52
CSNK1E-210ENST00000442216 NOL10Q9BSC4 688 aaKnown RBP18.28■□□□□ 0.52
CSNK1E-210ENST00000442216 BOLA2Q9H3K6 86 aa18.28■□□□□ 0.52
CSNK1E-210ENST00000442216 PAG1Q9NWQ8 432 aa18.28■□□□□ 0.52
CSNK1E-210ENST00000442216 MKRN1Q9UHC7 482 aaKnown RBP18.28■□□□□ 0.52
CSNK1E-210ENST00000442216 NDUFB9Q9Y6M9 179 aa18.28■□□□□ 0.52
CSNK1E-210ENST00000442216 THSD7BQ9C0I4 1608 aa18.27■□□□□ 0.52
CSNK1E-210ENST00000442216 SSC5DA1L4H1 1573 aa18.27■□□□□ 0.52
CSNK1E-210ENST00000442216 UNCXA6NJT0 531 aa18.27■□□□□ 0.52
CSNK1E-210ENST00000442216 PPP1R12BO60237 982 aaPredicted RBP18.27■□□□□ 0.52
CSNK1E-210ENST00000442216 ENTPD3O75355 529 aa18.27■□□□□ 0.52
CSNK1E-210ENST00000442216 IGHDP01880 384 aa18.27■□□□□ 0.52
CSNK1E-210ENST00000442216 CACNB3P54284 484 aa18.27■□□□□ 0.52
CSNK1E-210ENST00000442216 RHBDL3P58872 404 aa18.27■□□□□ 0.52
CSNK1E-210ENST00000442216 PPP4CP60510 307 aa18.27■□□□□ 0.52
CSNK1E-210ENST00000442216 NBPF12Q5TAG4 269 aaPredicted RBP18.27■□□□□ 0.52
CSNK1E-210ENST00000442216 JMYQ8N9B5 988 aa18.27■□□□□ 0.52
CSNK1E-210ENST00000442216 DNAJC2Q99543 621 aaKnown RBP18.27■□□□□ 0.52
CSNK1E-210ENST00000442216 TMEM39BQ9GZU3 492 aa18.27■□□□□ 0.52
CSNK1E-210ENST00000442216 RFX7Q2KHR2 1363 aa18.27■□□□□ 0.51
CSNK1E-210ENST00000442216 GOLIM4O00461 696 aa18.26■□□□□ 0.51
CSNK1E-210ENST00000442216 ERC2O15083 957 aa18.26■□□□□ 0.51
CSNK1E-210ENST00000442216 VEGFBP49765 207 aa18.26■□□□□ 0.51
CSNK1E-210ENST00000442216 RGMBQ6NW40 437 aa18.26■□□□□ 0.51
CSNK1E-210ENST00000442216 SALL3Q9BXA9 1300 aa18.25■□□□□ 0.51
CSNK1E-210ENST00000442216 WDR33Q9C0J8 1336 aaKnown RBP18.25■□□□□ 0.51
CSNK1E-210ENST00000442216 MX1P20591 662 aa18.25■□□□□ 0.51
CSNK1E-210ENST00000442216 NFIAQ12857 509 aa18.25■□□□□ 0.51
CSNK1E-210ENST00000442216 TTLL12Q14166 644 aaPredicted RBP18.25■□□□□ 0.51
CSNK1E-210ENST00000442216 MAGEB6Q8N7X4 407 aa18.25■□□□□ 0.51
CSNK1E-210ENST00000442216 FAM198AQ9UFP1 575 aa18.25■□□□□ 0.51
CSNK1E-210ENST00000442216 OTOFQ9HC10 1997 aa18.24■□□□□ 0.51
CSNK1E-210ENST00000442216 WDHD1O75717 1129 aaPredicted RBP18.24■□□□□ 0.51
CSNK1E-210ENST00000442216 GLRX3O76003 335 aaKnown RBP18.24■□□□□ 0.51
CSNK1E-210ENST00000442216 CYP7A1P22680 504 aa18.24■□□□□ 0.51
CSNK1E-210ENST00000442216 LDLRAD1Q5T700 205 aa18.24■□□□□ 0.51
CSNK1E-210ENST00000442216 CCDC102AQ96A19 550 aa18.24■□□□□ 0.51
CSNK1E-210ENST00000442216 CAPNS2Q96L46 248 aa18.24■□□□□ 0.51
CSNK1E-210ENST00000442216 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.24■□□□□ 0.51
CSNK1E-210ENST00000442216 COL2A1P02458 1487 aaPredicted RBP18.23■□□□□ 0.51
CSNK1E-210ENST00000442216 IREB2P48200 963 aaKnown RBP18.23■□□□□ 0.51
CSNK1E-210ENST00000442216 RGS3P49796 1198 aa18.23■□□□□ 0.51
CSNK1E-210ENST00000442216 SLC9C2Q5TAH2 1124 aa18.23■□□□□ 0.51
CSNK1E-210ENST00000442216 CYP4F22Q6NT55 531 aa18.23■□□□□ 0.51
CSNK1E-210ENST00000442216 PAXIP1Q6ZW49 1069 aaPredicted RBP18.23■□□□□ 0.51
CSNK1E-210ENST00000442216 ADGRA1Q86SQ6 560 aa18.23■□□□□ 0.51
CSNK1E-210ENST00000442216 AATFQ9NY61 560 aaKnown RBP eCLIP18.23■□□□□ 0.51
CSNK1E-210ENST00000442216 STAP2Q9UGK3 403 aa18.23■□□□□ 0.51
CSNK1E-210ENST00000442216 ANGEL1Q9UNK9 670 aaKnown RBP18.23■□□□□ 0.51
CSNK1E-210ENST00000442216 MYH1P12882 1939 aa18.23■□□□□ 0.51
CSNK1E-210ENST00000442216 LAMB1P07942 1786 aa18.22■□□□□ 0.51
CSNK1E-210ENST00000442216 UBE2Q2LH0YL09 131 aa18.22■□□□□ 0.51
CSNK1E-210ENST00000442216 USP2O75604 605 aaPredicted RBP18.22■□□□□ 0.51
CSNK1E-210ENST00000442216 PDE6AP16499 860 aa18.22■□□□□ 0.51
CSNK1E-210ENST00000442216 MAP2K2P36507 400 aa18.22■□□□□ 0.51
CSNK1E-210ENST00000442216 ZNF157P51786 506 aaPredicted RBP18.22■□□□□ 0.51
CSNK1E-210ENST00000442216 NUCB1Q02818 461 aa18.22■□□□□ 0.51
CSNK1E-210ENST00000442216 TCP10Q12799 353 aa18.22■□□□□ 0.51
CSNK1E-210ENST00000442216 DCAF15Q66K64 600 aa18.22■□□□□ 0.51
CSNK1E-210ENST00000442216 ZSCAN25Q6NSZ9 544 aa18.22■□□□□ 0.51
CSNK1E-210ENST00000442216 MOB2Q70IA6 237 aa18.22■□□□□ 0.51
CSNK1E-210ENST00000442216 CHD1LQ86WJ1 897 aa18.22■□□□□ 0.51
CSNK1E-210ENST00000442216 PI4K2BQ8TCG2 481 aa18.22■□□□□ 0.51
CSNK1E-210ENST00000442216 EDC3Q96F86 508 aaKnown RBP18.22■□□□□ 0.51
CSNK1E-210ENST00000442216 ATRNL1Q5VV63 1379 aa18.21■□□□□ 0.51
CSNK1E-210ENST00000442216 SLC10A3P09131 477 aa18.21■□□□□ 0.51
CSNK1E-210ENST00000442216 NOGQ13253 232 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms