RNA–Protein interactions for RNA: ENST00000442029.5

PTPRN-206, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-206ENST00000442029 XAGE2Q96GT9 111 aa17.86■□□□□ 0.45
PTPRN-206ENST00000442029 ABCF2Q9UG63 623 aa17.86■□□□□ 0.45
PTPRN-206ENST00000442029 DAGLAQ9Y4D2 1042 aa17.86■□□□□ 0.45
PTPRN-206ENST00000442029 RPAP1Q9BWH6 1393 aaPredicted RBP17.86■□□□□ 0.45
PTPRN-206ENST00000442029 PNMA6EA0A0J9YXQ4 647 aa17.85■□□□□ 0.45
PTPRN-206ENST00000442029 FKTNO75072 461 aa17.85■□□□□ 0.45
PTPRN-206ENST00000442029 ITPRIPQ8IWB1 547 aa17.85■□□□□ 0.45
PTPRN-206ENST00000442029 SLF2Q8IX21 1173 aa17.85■□□□□ 0.45
PTPRN-206ENST00000442029 CFHR5Q9BXR6 569 aa17.85■□□□□ 0.45
PTPRN-206ENST00000442029 OS9Q13438 667 aaPredicted RBP17.84■□□□□ 0.45
PTPRN-206ENST00000442029 RASGRF1Q13972 1273 aa17.84■□□□□ 0.45
PTPRN-206ENST00000442029 VGLL4Q14135 290 aa17.84■□□□□ 0.45
PTPRN-206ENST00000442029 SPTY2D1Q68D10 685 aaPredicted RBP17.84■□□□□ 0.45
PTPRN-206ENST00000442029 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.84■□□□□ 0.45
PTPRN-206ENST00000442029 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.84■□□□□ 0.45
PTPRN-206ENST00000442029 WRNIP1Q96S55 665 aa17.84■□□□□ 0.45
PTPRN-206ENST00000442029 PDS5AQ29RF7 1337 aaKnown RBP17.83■□□□□ 0.44
PTPRN-206ENST00000442029 IGF2BP3O00425 579 aaKnown RBP eCLIP17.83■□□□□ 0.44
PTPRN-206ENST00000442029 ZBTB22O15209 634 aa17.83■□□□□ 0.44
PTPRN-206ENST00000442029 GJA5P36382 358 aa17.83■□□□□ 0.44
PTPRN-206ENST00000442029 TCP10Q12799 353 aa17.83■□□□□ 0.44
PTPRN-206ENST00000442029 PKN2Q16513 984 aaKnown RBP17.83■□□□□ 0.44
PTPRN-206ENST00000442029 CDC42EP5Q6NZY7 148 aa17.83■□□□□ 0.44
PTPRN-206ENST00000442029 FAM151AQ8WW52 585 aa17.83■□□□□ 0.44
PTPRN-206ENST00000442029 ZNF341Q9BYN7 854 aa17.83■□□□□ 0.44
PTPRN-206ENST00000442029 USP40Q9NVE5 1235 aa17.83■□□□□ 0.44
PTPRN-206ENST00000442029 ERICH6Q7L0X2 663 aa17.82■□□□□ 0.44
PTPRN-206ENST00000442029 OTUD5Q96G74 571 aa17.82■□□□□ 0.44
PTPRN-206ENST00000442029 MYO5AQ9Y4I1 1855 aaKnown RBP17.82■□□□□ 0.44
PTPRN-206ENST00000442029 GTF2A2P52657 109 aa17.81■□□□□ 0.44
PTPRN-206ENST00000442029 MIGA2Q7L4E1 593 aa17.81■□□□□ 0.44
PTPRN-206ENST00000442029 R3HDMLQ9H3Y0 253 aa17.81■□□□□ 0.44
PTPRN-206ENST00000442029 C1orf115Q9H7X2 142 aa17.81■□□□□ 0.44
PTPRN-206ENST00000442029 CCL15-CCL14A0A0B4J2E2 113 aa17.8■□□□□ 0.44
PTPRN-206ENST00000442029 ATP8B2P98198 1209 aa17.8■□□□□ 0.44
PTPRN-206ENST00000442029 CCL15Q16663 113 aa17.8■□□□□ 0.44
PTPRN-206ENST00000442029 ERO1BQ86YB8 467 aa17.8■□□□□ 0.44
PTPRN-206ENST00000442029 CNKSR2Q8WXI2 1034 aa17.8■□□□□ 0.44
PTPRN-206ENST00000442029 MAST2Q6P0Q8 1798 aa17.8■□□□□ 0.44
PTPRN-206ENST00000442029 TESPA1A2RU30 521 aaPredicted RBP17.79■□□□□ 0.44
PTPRN-206ENST00000442029 SPDYE5A6NIY4 337 aa17.79■□□□□ 0.44
PTPRN-206ENST00000442029 SURF6O75683 361 aaKnown RBP17.79■□□□□ 0.44
PTPRN-206ENST00000442029 WDHD1O75717 1129 aaPredicted RBP17.79■□□□□ 0.44
PTPRN-206ENST00000442029 UQCRFS1P1P0C7P4 283 aa17.79■□□□□ 0.44
PTPRN-206ENST00000442029 MLLT1Q03111 559 aaPredicted RBP17.79■□□□□ 0.44
PTPRN-206ENST00000442029 NFIAQ12857 509 aa17.79■□□□□ 0.44
PTPRN-206ENST00000442029 CRHR2Q13324 411 aa17.79■□□□□ 0.44
PTPRN-206ENST00000442029 SPATA5Q8NB90 893 aa17.79■□□□□ 0.44
PTPRN-206ENST00000442029 ZKSCAN4Q969J2 545 aaPredicted RBP17.79■□□□□ 0.44
PTPRN-206ENST00000442029 SNCAIPQ9Y6H5 919 aa17.79■□□□□ 0.44
PTPRN-206ENST00000442029 GAKO14976 1311 aa17.78■□□□□ 0.44
PTPRN-206ENST00000442029 GSTO1P78417 241 aa17.78■□□□□ 0.44
PTPRN-206ENST00000442029 POLA2Q14181 598 aa17.78■□□□□ 0.44
PTPRN-206ENST00000442029 ZSCAN29Q8IWY8 852 aaPredicted RBP17.78■□□□□ 0.44
PTPRN-206ENST00000442029 SSH3Q8TE77 659 aa17.78■□□□□ 0.44
PTPRN-206ENST00000442029 ERO1AQ96HE7 468 aa17.78■□□□□ 0.44
PTPRN-206ENST00000442029 HMG20BQ9P0W2 317 aa17.78■□□□□ 0.44
PTPRN-206ENST00000442029 HPS5Q9UPZ3 1129 aa17.78■□□□□ 0.44
PTPRN-206ENST00000442029 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.78■□□□□ 0.44
PTPRN-206ENST00000442029 DOCK1Q14185 1865 aa17.78■□□□□ 0.44
PTPRN-206ENST00000442029 MROH7-TTC4A0A0A0MT08 1334 aa17.77■□□□□ 0.44
PTPRN-206ENST00000442029 LDHCP07864 332 aa17.77■□□□□ 0.44
PTPRN-206ENST00000442029 CETPP11597 493 aa17.77■□□□□ 0.44
PTPRN-206ENST00000442029 MS4A1P11836 297 aa17.77■□□□□ 0.44
PTPRN-206ENST00000442029 RLBP1P12271 317 aa17.77■□□□□ 0.44
PTPRN-206ENST00000442029 ARID4AP29374 1257 aaPredicted RBP17.77■□□□□ 0.44
PTPRN-206ENST00000442029 BTDP43251 543 aa17.77■□□□□ 0.44
PTPRN-206ENST00000442029 RGS3P49796 1198 aa17.77■□□□□ 0.44
PTPRN-206ENST00000442029 TAF1CQ15572 869 aaPredicted RBP17.77■□□□□ 0.44
PTPRN-206ENST00000442029 CCDC158Q5M9N0 1113 aa17.77■□□□□ 0.44
PTPRN-206ENST00000442029 TTC39AQ5SRH9 613 aa17.77■□□□□ 0.44
PTPRN-206ENST00000442029 FBXO46Q6PJ61 603 aaPredicted RBP17.77■□□□□ 0.44
PTPRN-206ENST00000442029 BRI3BPQ8WY22 251 aa17.77■□□□□ 0.44
PTPRN-206ENST00000442029 MS4A4AQ96JQ5 239 aa17.77■□□□□ 0.44
PTPRN-206ENST00000442029 PTPN18Q99952 460 aa17.77■□□□□ 0.44
PTPRN-206ENST00000442029 IDI2Q9BXS1 227 aa17.77■□□□□ 0.44
PTPRN-206ENST00000442029 ZFYVE28Q9HCC9 887 aa17.77■□□□□ 0.44
PTPRN-206ENST00000442029 GPR108Q9NPR9 543 aa17.77■□□□□ 0.44
PTPRN-206ENST00000442029 RAI14Q9P0K7 980 aa17.77■□□□□ 0.44
PTPRN-206ENST00000442029 FAM198AQ9UFP1 575 aa17.77■□□□□ 0.44
PTPRN-206ENST00000442029 CDK5RAP2Q96SN8 1893 aa17.77■□□□□ 0.43
PTPRN-206ENST00000442029 ZBTB7BO15156 539 aaPredicted RBP17.76■□□□□ 0.43
PTPRN-206ENST00000442029 ENTPD3O75355 529 aa17.76■□□□□ 0.43
PTPRN-206ENST00000442029 RGS19P49795 217 aa17.76■□□□□ 0.43
PTPRN-206ENST00000442029 MECOMQ03112 1051 aa17.76■□□□□ 0.43
PTPRN-206ENST00000442029 PPATQ06203 517 aa17.76■□□□□ 0.43
PTPRN-206ENST00000442029 PPIL2Q13356 520 aa17.76■□□□□ 0.43
PTPRN-206ENST00000442029 SNAPC2Q13487 334 aa17.76■□□□□ 0.43
PTPRN-206ENST00000442029 TNNI3KQ59H18 835 aa17.76■□□□□ 0.43
PTPRN-206ENST00000442029 FAM163AQ96GL9 167 aaPredicted RBP17.76■□□□□ 0.43
PTPRN-206ENST00000442029 TRIM17Q9Y577 477 aa17.76■□□□□ 0.43
PTPRN-206ENST00000442029 FPGT-TNNI3KV9GXZ4 949 aa17.76■□□□□ 0.43
PTPRN-206ENST00000442029 ATAD5Q96QE3 1844 aa17.76■□□□□ 0.43
PTPRN-206ENST00000442029 INPP5BP32019 993 aa17.75■□□□□ 0.43
PTPRN-206ENST00000442029 SOX10P56693 466 aa17.75■□□□□ 0.43
PTPRN-206ENST00000442029 SP3Q02447 781 aa17.75■□□□□ 0.43
PTPRN-206ENST00000442029 PICALMQ13492 652 aa17.75■□□□□ 0.43
PTPRN-206ENST00000442029 PI16Q6UXB8 463 aa17.75■□□□□ 0.43
PTPRN-206ENST00000442029 NOL10Q9BSC4 688 aaKnown RBP17.75■□□□□ 0.43
PTPRN-206ENST00000442029 LRP2BPQ9P2M1 347 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms