RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ALG1LQ6GMV1 187 aa5.5□□□□□ -1.53
HMGB3P11-201ENST00000440127 DYMQ7RTS9 669 aa5.5□□□□□ -1.53
HMGB3P11-201ENST00000440127 EZH1Q92800 747 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P11-201ENST00000440127 MFSD14AQ96MC6 490 aa5.5□□□□□ -1.53
HMGB3P11-201ENST00000440127 EMILIN2Q9BXX0 1053 aa5.5□□□□□ -1.53
HMGB3P11-201ENST00000440127 CEP44Q9C0F1 390 aa5.5□□□□□ -1.53
HMGB3P11-201ENST00000440127 ATXN3LQ9H3M9 355 aa5.5□□□□□ -1.53
HMGB3P11-201ENST00000440127 TMEM39AQ9NV64 488 aa5.5□□□□□ -1.53
HMGB3P11-201ENST00000440127 PNMA6FA0A0J9YX94 578 aa5.49□□□□□ -1.53
HMGB3P11-201ENST00000440127 TREHO43280 583 aa5.49□□□□□ -1.53
HMGB3P11-201ENST00000440127 RAB6AP20340 208 aa5.49□□□□□ -1.53
HMGB3P11-201ENST00000440127 GSTT1P30711 240 aa5.49□□□□□ -1.53
HMGB3P11-201ENST00000440127 ENOX2Q16206 610 aaKnown RBP5.49□□□□□ -1.53
HMGB3P11-201ENST00000440127 FBXL6Q8N531 539 aa5.49□□□□□ -1.53
HMGB3P11-201ENST00000440127 FBLIM1Q8WUP2 373 aa5.49□□□□□ -1.53
HMGB3P11-201ENST00000440127 TBC1D32Q96NH3 1257 aa5.49□□□□□ -1.53
HMGB3P11-201ENST00000440127 TRIM56Q9BRZ2 755 aaKnown RBP5.49□□□□□ -1.53
HMGB3P11-201ENST00000440127 GOLGA2P5Q9HBQ8 144 aa5.49□□□□□ -1.53
HMGB3P11-201ENST00000440127 PPM1HQ9ULR3 514 aa5.49□□□□□ -1.53
HMGB3P11-201ENST00000440127 AOC2O75106 756 aa5.48□□□□□ -1.53
HMGB3P11-201ENST00000440127 WNT11O96014 354 aa5.48□□□□□ -1.53
HMGB3P11-201ENST00000440127 IGHA2P01877 340 aa5.48□□□□□ -1.53
HMGB3P11-201ENST00000440127 DRD2P14416 443 aa5.48□□□□□ -1.53
HMGB3P11-201ENST00000440127 FOSL1P15407 271 aa5.48□□□□□ -1.53
HMGB3P11-201ENST00000440127 ASPAP45381 313 aa5.48□□□□□ -1.53
HMGB3P11-201ENST00000440127 IRAK1P51617 712 aa5.48□□□□□ -1.53
HMGB3P11-201ENST00000440127 FCGRTP55899 365 aa5.48□□□□□ -1.53
HMGB3P11-201ENST00000440127 ZAR1Q86SH2 424 aa5.48□□□□□ -1.53
HMGB3P11-201ENST00000440127 DTX1Q86Y01 620 aa5.48□□□□□ -1.53
HMGB3P11-201ENST00000440127 FRMD6Q96NE9 622 aa5.48□□□□□ -1.53
HMGB3P11-201ENST00000440127 SPG7Q9UQ90 795 aa5.48□□□□□ -1.53
HMGB3P11-201ENST00000440127 ACTL7BQ9Y614 415 aa5.48□□□□□ -1.53
HMGB3P11-201ENST00000440127 ZBTB7CA1YPR0 619 aa5.47□□□□□ -1.53
HMGB3P11-201ENST00000440127 DLGAP3O95886 979 aa5.47□□□□□ -1.53
HMGB3P11-201ENST00000440127 GSTP1P09211 210 aaKnown RBP5.47□□□□□ -1.53
HMGB3P11-201ENST00000440127 SPINK2P20155 84 aa5.47□□□□□ -1.53
HMGB3P11-201ENST00000440127 ID3Q02535 119 aa5.47□□□□□ -1.53
HMGB3P11-201ENST00000440127 CYP27C1Q4G0S4 372 aa5.47□□□□□ -1.53
HMGB3P11-201ENST00000440127 NPM2Q86SE8 214 aaKnown RBP5.47□□□□□ -1.53
HMGB3P11-201ENST00000440127 VSIG10LQ86VR7 867 aa5.47□□□□□ -1.53
HMGB3P11-201ENST00000440127 EPS8L3Q8TE67 593 aaKnown RBP5.47□□□□□ -1.53
HMGB3P11-201ENST00000440127 FBXL18Q96ME1 805 aa5.47□□□□□ -1.53
HMGB3P11-201ENST00000440127 ASB16Q96NS5 453 aa5.47□□□□□ -1.53
HMGB3P11-201ENST00000440127 KRTAP9-9Q9BYP9 154 aa5.47□□□□□ -1.53
HMGB3P11-201ENST00000440127 KRTAP9-4Q9BYQ2 154 aa5.47□□□□□ -1.53
HMGB3P11-201ENST00000440127 BCO2Q9BYV7 579 aa5.47□□□□□ -1.53
HMGB3P11-201ENST00000440127 PRKAG2Q9UGJ0 569 aa5.47□□□□□ -1.53
HMGB3P11-201ENST00000440127 IVNS1ABPQ9Y6Y0 642 aa5.47□□□□□ -1.53
HMGB3P11-201ENST00000440127 PRR19A6NJB7 356 aa5.46□□□□□ -1.54
HMGB3P11-201ENST00000440127 CYP26A1O43174 497 aa5.46□□□□□ -1.54
HMGB3P11-201ENST00000440127 PAX4O43316 350 aa5.46□□□□□ -1.54
HMGB3P11-201ENST00000440127 MAPK8P45983 427 aa5.46□□□□□ -1.54
HMGB3P11-201ENST00000440127 GP2P55259 537 aaKnown RBP5.46□□□□□ -1.54
HMGB3P11-201ENST00000440127 DSC3Q14574 896 aa5.46□□□□□ -1.54
HMGB3P11-201ENST00000440127 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.46□□□□□ -1.54
HMGB3P11-201ENST00000440127 DIEXFQ68CQ4 756 aaKnown RBP5.46□□□□□ -1.54
HMGB3P11-201ENST00000440127 SCARA3Q6AZY7 606 aa5.46□□□□□ -1.54
HMGB3P11-201ENST00000440127 CDPF1Q6NVV7 123 aa5.46□□□□□ -1.54
HMGB3P11-201ENST00000440127 WDR18Q9BV38 432 aa5.46□□□□□ -1.54
HMGB3P11-201ENST00000440127 TRAIPQ9BWF2 469 aa5.46□□□□□ -1.54
HMGB3P11-201ENST00000440127 ACSS3Q9H6R3 686 aa5.46□□□□□ -1.54
HMGB3P11-201ENST00000440127 AKAP2Q9Y2D5 859 aa5.46□□□□□ -1.54
HMGB3P11-201ENST00000440127 CECR2Q9BXF3 1484 aa5.45□□□□□ -1.54
HMGB3P11-201ENST00000440127 F13BP05160 661 aa5.45□□□□□ -1.54
HMGB3P11-201ENST00000440127 ITGAEP38570 1179 aa5.45□□□□□ -1.54
HMGB3P11-201ENST00000440127 FMR1Q06787 632 aaKnown RBP eCLIP5.45□□□□□ -1.54
HMGB3P11-201ENST00000440127 LRRC14Q15048 493 aa5.45□□□□□ -1.54
HMGB3P11-201ENST00000440127 KIF4BQ2VIQ3 1234 aa5.45□□□□□ -1.54
HMGB3P11-201ENST00000440127 MCTP1Q6DN14 999 aa5.45□□□□□ -1.54
HMGB3P11-201ENST00000440127 SULF2Q8IWU5 870 aa5.45□□□□□ -1.54
HMGB3P11-201ENST00000440127 GLIS3Q8NEA6 775 aa5.45□□□□□ -1.54
HMGB3P11-201ENST00000440127 ACSBG1Q96GR2 724 aa5.45□□□□□ -1.54
HMGB3P11-201ENST00000440127 SEMA6CQ9H3T2 930 aa5.45□□□□□ -1.54
HMGB3P11-201ENST00000440127 GSX1Q9H4S2 264 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P11-201ENST00000440127 BSDC1Q9NW68 430 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P11-201ENST00000440127 DAGLAQ9Y4D2 1042 aa5.45□□□□□ -1.54
HMGB3P11-201ENST00000440127 NFICP08651 508 aa5.44□□□□□ -1.54
HMGB3P11-201ENST00000440127 NME2P22392 152 aa5.44□□□□□ -1.54
HMGB3P11-201ENST00000440127 KRTAP19-1Q8IUB9 90 aa5.44□□□□□ -1.54
HMGB3P11-201ENST00000440127 STK11IPQ8N1F8 1099 aa5.44□□□□□ -1.54
HMGB3P11-201ENST00000440127 AGBL5Q8NDL9 886 aa5.44□□□□□ -1.54
HMGB3P11-201ENST00000440127 KCNB2Q92953 911 aa5.44□□□□□ -1.54
HMGB3P11-201ENST00000440127 FAM105AQ9NUU6 356 aa5.44□□□□□ -1.54
HMGB3P11-201ENST00000440127 CCDC9Q9Y3X0 531 aaKnown RBP5.44□□□□□ -1.54
HMGB3P11-201ENST00000440127 PRNPP04156 253 aa5.43□□□□□ -1.54
HMGB3P11-201ENST00000440127 ARNTP27540 789 aa5.43□□□□□ -1.54
HMGB3P11-201ENST00000440127 COL19A1Q14993 1142 aa5.43□□□□□ -1.54
HMGB3P11-201ENST00000440127 NXPE4Q6UWF7 544 aa5.43□□□□□ -1.54
HMGB3P11-201ENST00000440127 SMYD4Q8IYR2 804 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P11-201ENST00000440127 ANKRD24Q8TF21 1146 aa5.43□□□□□ -1.54
HMGB3P11-201ENST00000440127 CCDC86Q9H6F5 360 aaKnown RBP5.43□□□□□ -1.54
HMGB3P11-201ENST00000440127 SSU72Q9NP77 194 aaKnown RBP5.43□□□□□ -1.54
HMGB3P11-201ENST00000440127 PICK1Q9NRD5 415 aa5.43□□□□□ -1.54
HMGB3P11-201ENST00000440127 CRIM1Q9NZV1 1036 aa5.43□□□□□ -1.54
HMGB3P11-201ENST00000440127 FAM8A1Q9UBU6 413 aa5.43□□□□□ -1.54
HMGB3P11-201ENST00000440127 MROH2BQ7Z745 1585 aa5.42□□□□□ -1.54
HMGB3P11-201ENST00000440127 TMPRSS2O15393 492 aa5.42□□□□□ -1.54
HMGB3P11-201ENST00000440127 CTSBP07858 339 aa5.42□□□□□ -1.54
HMGB3P11-201ENST00000440127 LIG1P18858 919 aa5.42□□□□□ -1.54
HMGB3P11-201ENST00000440127 ZNF157P51786 506 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms