RNA–Protein interactions for RNA: ENST00000439976.5

LAMB1-205, Transcript of laminin subunit beta 1, human

TSL 5

Gene LAMB1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMB1-205	ENST00000439976	TMOD2	Q9NZR1	351 aa		20.41	■□□□□ 0.86
LAMB1-205	ENST00000439976	ADGRA2	Q96PE1	1338 aa		20.41	■□□□□ 0.86
LAMB1-205	ENST00000439976	MAST3	O60307	1309 aa		20.4	■□□□□ 0.86
LAMB1-205	ENST00000439976	RFX5	P48382	616 aa	Predicted RBP	20.4	■□□□□ 0.86
LAMB1-205	ENST00000439976	PPAT	Q06203	517 aa		20.4	■□□□□ 0.86
LAMB1-205	ENST00000439976	MOGS	Q13724	837 aa		20.4	■□□□□ 0.86
LAMB1-205	ENST00000439976	SHISA4	Q96DD7	197 aa		20.4	■□□□□ 0.86
LAMB1-205	ENST00000439976	USP44	Q9H0E7	712 aa		20.4	■□□□□ 0.86
LAMB1-205	ENST00000439976	TRIOBP	Q9H2D6	2365 aa		20.4	■□□□□ 0.86
LAMB1-205	ENST00000439976	ZNF112	Q9UJU3	913 aa		20.4	■□□□□ 0.86
LAMB1-205	ENST00000439976	GNRH1	P01148	92 aa		20.39	■□□□□ 0.85
LAMB1-205	ENST00000439976	PUM3	Q15397	648 aa	Known RBP	20.39	■□□□□ 0.85
LAMB1-205	ENST00000439976	DCAF15	Q66K64	600 aa		20.39	■□□□□ 0.85
LAMB1-205	ENST00000439976	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	20.39	■□□□□ 0.85
LAMB1-205	ENST00000439976	HOOK2	Q96ED9	719 aa		20.39	■□□□□ 0.85
LAMB1-205	ENST00000439976	ZNF341	Q9BYN7	854 aa		20.39	■□□□□ 0.85
LAMB1-205	ENST00000439976	RANBP2	P49792	3224 aa	Known RBP	20.39	■□□□□ 0.85
LAMB1-205	ENST00000439976	MYH13	Q9UKX3	1938 aa		20.39	■□□□□ 0.85
LAMB1-205	ENST00000439976	WDHD1	O75717	1129 aa	Predicted RBP	20.38	■□□□□ 0.85
LAMB1-205	ENST00000439976	PRMT2	P55345	433 aa		20.38	■□□□□ 0.85
LAMB1-205	ENST00000439976	KIF22	Q14807	665 aa		20.38	■□□□□ 0.85
LAMB1-205	ENST00000439976	ANKRD23	Q86SG2	305 aa		20.38	■□□□□ 0.85
LAMB1-205	ENST00000439976	FAM151A	Q8WW52	585 aa		20.38	■□□□□ 0.85
LAMB1-205	ENST00000439976	TRIM47	Q96LD4	638 aa		20.38	■□□□□ 0.85
LAMB1-205	ENST00000439976	CPA4	Q9UI42	421 aa		20.38	■□□□□ 0.85
LAMB1-205	ENST00000439976	KCNH4	Q9UQ05	1017 aa		20.38	■□□□□ 0.85
LAMB1-205	ENST00000439976		H0YGN5	161 aa		20.37	■□□□□ 0.85
LAMB1-205	ENST00000439976	IFIT1	P09914	478 aa	Known RBP	20.37	■□□□□ 0.85
LAMB1-205	ENST00000439976	NFIA	Q12857	509 aa		20.37	■□□□□ 0.85
LAMB1-205	ENST00000439976	MTFR1	Q15390	333 aa		20.37	■□□□□ 0.85
LAMB1-205	ENST00000439976	CDC42EP5	Q6NZY7	148 aa		20.37	■□□□□ 0.85
LAMB1-205	ENST00000439976	DAGLA	Q9Y4D2	1042 aa		20.37	■□□□□ 0.85
LAMB1-205	ENST00000439976	EYA2	O00167	538 aa		20.36	■□□□□ 0.85
LAMB1-205	ENST00000439976	ANP32C	O43423	234 aa		20.36	■□□□□ 0.85
LAMB1-205	ENST00000439976	ECM2	O94769	699 aa	Predicted RBP	20.36	■□□□□ 0.85
LAMB1-205	ENST00000439976	DIXDC1	Q155Q3	683 aa		20.36	■□□□□ 0.85
LAMB1-205	ENST00000439976	SRRD	Q9UH36	339 aa		20.36	■□□□□ 0.85
LAMB1-205	ENST00000439976	PTPRC	P08575	1304 aa		20.35	■□□□□ 0.85
LAMB1-205	ENST00000439976	PDHX	O00330	501 aa		20.35	■□□□□ 0.85
LAMB1-205	ENST00000439976	OSBP	P22059	807 aa		20.35	■□□□□ 0.85
LAMB1-205	ENST00000439976	PSMC4	P43686	418 aa		20.35	■□□□□ 0.85
LAMB1-205	ENST00000439976	TCP10	Q12799	353 aa		20.35	■□□□□ 0.85
LAMB1-205	ENST00000439976	NOL9	Q5SY16	702 aa	Known RBP	20.35	■□□□□ 0.85
LAMB1-205	ENST00000439976	ATG9A	Q7Z3C6	839 aa		20.35	■□□□□ 0.85
LAMB1-205	ENST00000439976	WDR66	Q8TBY9	1149 aa		20.35	■□□□□ 0.85
LAMB1-205	ENST00000439976	FAM198A	Q9UFP1	575 aa		20.35	■□□□□ 0.85
LAMB1-205	ENST00000439976	ATRNL1	Q5VV63	1379 aa		20.34	■□□□□ 0.85
LAMB1-205	ENST00000439976	PRDX5	P30044	214 aa		20.34	■□□□□ 0.85
LAMB1-205	ENST00000439976	FAM9B	Q8IZU0	186 aa		20.34	■□□□□ 0.85
LAMB1-205	ENST00000439976	SSH1	Q8WYL5	1049 aa		20.34	■□□□□ 0.85
LAMB1-205	ENST00000439976	LPIN2	Q92539	896 aa		20.34	■□□□□ 0.85
LAMB1-205	ENST00000439976	AK9	Q5TCS8	1911 aa		20.33	■□□□□ 0.85
LAMB1-205	ENST00000439976	SLC5A1	P13866	664 aa		20.33	■□□□□ 0.85
LAMB1-205	ENST00000439976	GPAT2	Q6NUI2	795 aa		20.33	■□□□□ 0.85
LAMB1-205	ENST00000439976	UBE2Q1	Q7Z7E8	422 aa		20.33	■□□□□ 0.85
LAMB1-205	ENST00000439976	ZFPM1	Q8IX07	1006 aa		20.33	■□□□□ 0.85
LAMB1-205	ENST00000439976	BCR	P11274	1271 aa		20.32	■□□□□ 0.84
LAMB1-205	ENST00000439976	PHF20L1	A8MW92	1017 aa		20.31	■□□□□ 0.84
LAMB1-205	ENST00000439976	GRK4	P32298	578 aa		20.31	■□□□□ 0.84
LAMB1-205	ENST00000439976	MGAM	O43451	1857 aa		20.3	■□□□□ 0.84
LAMB1-205	ENST00000439976	SALL1	Q9NSC2	1324 aa		20.3	■□□□□ 0.84
LAMB1-205	ENST00000439976	RFX7	Q2KHR2	1363 aa		20.3	■□□□□ 0.84
LAMB1-205	ENST00000439976	MYPN	Q86TC9	1320 aa		20.29	■□□□□ 0.84
LAMB1-205	ENST00000439976	CXCL11	O14625	94 aa		20.29	■□□□□ 0.84
LAMB1-205	ENST00000439976	FMNL1	O95466	1100 aa	Predicted RBP	20.29	■□□□□ 0.84
LAMB1-205	ENST00000439976	GJB1	P08034	283 aa		20.29	■□□□□ 0.84
LAMB1-205	ENST00000439976	CYP2C8	P10632	490 aa		20.29	■□□□□ 0.84
LAMB1-205	ENST00000439976	GJA8	P48165	433 aa		20.29	■□□□□ 0.84
LAMB1-205	ENST00000439976	PRKCZ	Q05513	592 aa		20.29	■□□□□ 0.84
LAMB1-205	ENST00000439976	RAET1E	Q8TD07	263 aa		20.29	■□□□□ 0.84
LAMB1-205	ENST00000439976	USP40	Q9NVE5	1235 aa		20.29	■□□□□ 0.84
LAMB1-205	ENST00000439976	DOCK2	Q92608	1830 aa		20.29	■□□□□ 0.84
LAMB1-205	ENST00000439976	PTPRF	P10586	1907 aa		20.28	■□□□□ 0.84
LAMB1-205	ENST00000439976	LDHB	P07195	334 aa	Known RBP	20.28	■□□□□ 0.84
LAMB1-205	ENST00000439976	CCL5	P13501	91 aa		20.28	■□□□□ 0.84
LAMB1-205	ENST00000439976	HOXD10	P28358	340 aa		20.28	■□□□□ 0.84
LAMB1-205	ENST00000439976	PHKA1	P46020	1223 aa		20.28	■□□□□ 0.84
LAMB1-205	ENST00000439976	ATP2B3	Q16720	1220 aa		20.28	■□□□□ 0.84
LAMB1-205	ENST00000439976	CHRDL2	Q6WN34	429 aa		20.28	■□□□□ 0.84
LAMB1-205	ENST00000439976	SH3BP5L	Q7L8J4	393 aa		20.28	■□□□□ 0.84
LAMB1-205	ENST00000439976	PARK7	Q99497	189 aa	Known RBP	20.28	■□□□□ 0.84
LAMB1-205	ENST00000439976		A0A0G2JLL6	359 aa	Predicted RBP	20.27	■□□□□ 0.84
LAMB1-205	ENST00000439976	ZBTB22	O15209	634 aa		20.27	■□□□□ 0.84
LAMB1-205	ENST00000439976	CIAO1	O76071	339 aa		20.27	■□□□□ 0.84
LAMB1-205	ENST00000439976	PRRT2	Q7Z6L0	340 aa	Predicted RBP	20.27	■□□□□ 0.84
LAMB1-205	ENST00000439976	NKX2-3	Q8TAU0	364 aa		20.27	■□□□□ 0.84
LAMB1-205	ENST00000439976	IDI2	Q9BXS1	227 aa		20.27	■□□□□ 0.84
LAMB1-205	ENST00000439976	SIL1	Q9H173	461 aa		20.27	■□□□□ 0.84
LAMB1-205	ENST00000439976	PRO3102	Q9H379	93 aa		20.27	■□□□□ 0.84
LAMB1-205	ENST00000439976	RBM27	Q9P2N5	1060 aa	Known RBP	20.27	■□□□□ 0.84
LAMB1-205	ENST00000439976	FBXO3	Q9UK99	471 aa		20.27	■□□□□ 0.84
LAMB1-205	ENST00000439976	GABRQ	Q9UN88	632 aa		20.27	■□□□□ 0.84
LAMB1-205	ENST00000439976	MYH2	Q9UKX2	1941 aa		20.27	■□□□□ 0.84
LAMB1-205	ENST00000439976	GAK	O14976	1311 aa		20.27	■□□□□ 0.83
LAMB1-205	ENST00000439976	PHIP	Q8WWQ0	1821 aa		20.26	■□□□□ 0.83
LAMB1-205	ENST00000439976	SLURP2	P0DP57	97 aa		20.26	■□□□□ 0.83
LAMB1-205	ENST00000439976	RGS3	P49796	1198 aa		20.26	■□□□□ 0.83
LAMB1-205	ENST00000439976	MAP3K10	Q02779	954 aa		20.26	■□□□□ 0.83
LAMB1-205	ENST00000439976		E9PSI1	815 aa		20.25	■□□□□ 0.83
LAMB1-205	ENST00000439976	SEMA3E	O15041	775 aa		20.25	■□□□□ 0.83

Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms