RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 RPAP1Q9BWH6 1393 aaPredicted RBP19.88■□□□□ 0.77
ITGB1-207ENST00000439974 HOOK2Q96ED9 719 aa19.88■□□□□ 0.77
ITGB1-207ENST00000439974 SEMA3EO15041 775 aa19.87■□□□□ 0.77
ITGB1-207ENST00000439974 CRHR2Q13324 411 aa19.87■□□□□ 0.77
ITGB1-207ENST00000439974 MVPQ14764 893 aaKnown RBP19.87■□□□□ 0.77
ITGB1-207ENST00000439974 CNKSR2Q8WXI2 1034 aa19.87■□□□□ 0.77
ITGB1-207ENST00000439974 MS4A4AQ96JQ5 239 aa19.87■□□□□ 0.77
ITGB1-207ENST00000439974 PTPN18Q99952 460 aa19.87■□□□□ 0.77
ITGB1-207ENST00000439974 SALL1Q9NSC2 1324 aa19.86■□□□□ 0.77
ITGB1-207ENST00000439974 PRDX5P30044 214 aa19.86■□□□□ 0.77
ITGB1-207ENST00000439974 PHKA1P46020 1223 aa19.86■□□□□ 0.77
ITGB1-207ENST00000439974 OTUD5Q96G74 571 aa19.86■□□□□ 0.77
ITGB1-207ENST00000439974 DENND2AQ9ULE3 1009 aa19.86■□□□□ 0.77
ITGB1-207ENST00000439974 DAGLAQ9Y4D2 1042 aa19.86■□□□□ 0.77
ITGB1-207ENST00000439974 TRIM17Q9Y577 477 aa19.86■□□□□ 0.77
ITGB1-207ENST00000439974 PDE4DIPQ5VU43 2346 aa19.85■□□□□ 0.77
ITGB1-207ENST00000439974 SPDYE5A6NIY4 337 aa19.85■□□□□ 0.77
ITGB1-207ENST00000439974 ZBTB22O15209 634 aa19.85■□□□□ 0.77
ITGB1-207ENST00000439974 LDHBP07195 334 aaKnown RBP19.85■□□□□ 0.77
ITGB1-207ENST00000439974 MS4A1P11836 297 aa19.85■□□□□ 0.77
ITGB1-207ENST00000439974 GTF2A2P52657 109 aa19.85■□□□□ 0.77
ITGB1-207ENST00000439974 DIXDC1Q155Q3 683 aa19.85■□□□□ 0.77
ITGB1-207ENST00000439974 DCAF15Q66K64 600 aa19.85■□□□□ 0.77
ITGB1-207ENST00000439974 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.85■□□□□ 0.77
ITGB1-207ENST00000439974 BRI3BPQ8WY22 251 aa19.85■□□□□ 0.77
ITGB1-207ENST00000439974 ERO1AQ96HE7 468 aa19.85■□□□□ 0.77
ITGB1-207ENST00000439974 WRNIP1Q96S55 665 aa19.85■□□□□ 0.77
ITGB1-207ENST00000439974 SNCAIPQ9Y6H5 919 aa19.85■□□□□ 0.77
ITGB1-207ENST00000439974 CCL15-CCL14A0A0B4J2E2 113 aa19.84■□□□□ 0.77
ITGB1-207ENST00000439974 MTX1Q13505 466 aa19.84■□□□□ 0.77
ITGB1-207ENST00000439974 CCL15Q16663 113 aa19.84■□□□□ 0.77
ITGB1-207ENST00000439974 FAM151AQ8WW52 585 aa19.84■□□□□ 0.77
ITGB1-207ENST00000439974 ADORA1P30542 326 aa19.83■□□□□ 0.77
ITGB1-207ENST00000439974 RRP1P56182 461 aaKnown RBP19.83■□□□□ 0.77
ITGB1-207ENST00000439974 CCDC102BQ68D86 513 aa19.83■□□□□ 0.77
ITGB1-207ENST00000439974 CDC42EP5Q6NZY7 148 aa19.83■□□□□ 0.77
ITGB1-207ENST00000439974 OTOP1Q7RTM1 612 aa19.83■□□□□ 0.77
ITGB1-207ENST00000439974 ERO1BQ86YB8 467 aa19.83■□□□□ 0.77
ITGB1-207ENST00000439974 ZGPATQ8N5A5 531 aaKnown RBP19.83■□□□□ 0.77
ITGB1-207ENST00000439974 ZNF341Q9BYN7 854 aa19.83■□□□□ 0.77
ITGB1-207ENST00000439974 AK9Q5TCS8 1911 aa19.82■□□□□ 0.76
ITGB1-207ENST00000439974 ATP8B2P98198 1209 aa19.82■□□□□ 0.76
ITGB1-207ENST00000439974 SP3Q02447 781 aa19.82■□□□□ 0.76
ITGB1-207ENST00000439974 CD99L2Q8TCZ2 262 aa19.82■□□□□ 0.76
ITGB1-207ENST00000439974 ZKSCAN4Q969J2 545 aaPredicted RBP19.82■□□□□ 0.76
ITGB1-207ENST00000439974 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.82■□□□□ 0.76
ITGB1-207ENST00000439974 PDE3AQ14432 1141 aa19.81■□□□□ 0.76
ITGB1-207ENST00000439974 TAF1CQ15572 869 aaPredicted RBP19.81■□□□□ 0.76
ITGB1-207ENST00000439974 CEP85Q6P2H3 762 aa19.81■□□□□ 0.76
ITGB1-207ENST00000439974 ZFYVE28Q9HCC9 887 aa19.81■□□□□ 0.76
ITGB1-207ENST00000439974 DDX19BQ9UMR2 479 aa19.81■□□□□ 0.76
ITGB1-207ENST00000439974 AKAP2Q9Y2D5 859 aa19.81■□□□□ 0.76
ITGB1-207ENST00000439974 PDS5AQ29RF7 1337 aaKnown RBP19.8■□□□□ 0.76
ITGB1-207ENST00000439974 A0A1B0GUL7 405 aa19.8■□□□□ 0.76
ITGB1-207ENST00000439974 TNRC18O15417 2968 aaPredicted RBP19.8■□□□□ 0.76
ITGB1-207ENST00000439974 CETPP11597 493 aa19.8■□□□□ 0.76
ITGB1-207ENST00000439974 TIMM10P62072 90 aa19.8■□□□□ 0.76
ITGB1-207ENST00000439974 TCP10Q12799 353 aa19.8■□□□□ 0.76
ITGB1-207ENST00000439974 NFIAQ12857 509 aa19.8■□□□□ 0.76
ITGB1-207ENST00000439974 RASGRF1Q13972 1273 aa19.8■□□□□ 0.76
ITGB1-207ENST00000439974 MIGA2Q7L4E1 593 aa19.8■□□□□ 0.76
ITGB1-207ENST00000439974 FAM43AQ8N2R8 423 aa19.8■□□□□ 0.76
ITGB1-207ENST00000439974 EFCC1Q9HA90 598 aa19.8■□□□□ 0.76
ITGB1-207ENST00000439974 USP40Q9NVE5 1235 aa19.8■□□□□ 0.76
ITGB1-207ENST00000439974 MYH2Q9UKX2 1941 aa19.8■□□□□ 0.76
ITGB1-207ENST00000439974 IRF6O14896 467 aa19.79■□□□□ 0.76
ITGB1-207ENST00000439974 WDHD1O75717 1129 aaPredicted RBP19.79■□□□□ 0.76
ITGB1-207ENST00000439974 TFCP2Q12800 502 aa19.79■□□□□ 0.76
ITGB1-207ENST00000439974 PPIL2Q13356 520 aa19.79■□□□□ 0.76
ITGB1-207ENST00000439974 SNAPC2Q13487 334 aa19.79■□□□□ 0.76
ITGB1-207ENST00000439974 POLA2Q14181 598 aa19.79■□□□□ 0.76
ITGB1-207ENST00000439974 XAGE2Q96GT9 111 aa19.79■□□□□ 0.76
ITGB1-207ENST00000439974 ZBTB40Q9NUA8 1239 aa19.79■□□□□ 0.76
ITGB1-207ENST00000439974 HTTP42858 3142 aa19.79■□□□□ 0.76
ITGB1-207ENST00000439974 GAKO14976 1311 aa19.78■□□□□ 0.76
ITGB1-207ENST00000439974 PPATQ06203 517 aa19.78■□□□□ 0.76
ITGB1-207ENST00000439974 DZIP1Q86YF9 867 aaKnown RBP19.78■□□□□ 0.76
ITGB1-207ENST00000439974 SSH3Q8TE77 659 aa19.78■□□□□ 0.76
ITGB1-207ENST00000439974 ZCCHC17Q9NP64 241 aaKnown RBP19.78■□□□□ 0.76
ITGB1-207ENST00000439974 FAM198AQ9UFP1 575 aa19.78■□□□□ 0.76
ITGB1-207ENST00000439974 ABCF2Q9UG63 623 aa19.78■□□□□ 0.76
ITGB1-207ENST00000439974 ZNF112Q9UJU3 913 aa19.78■□□□□ 0.76
ITGB1-207ENST00000439974 PTPN22Q9Y2R2 807 aa19.78■□□□□ 0.76
ITGB1-207ENST00000439974 INPP5BP32019 993 aa19.77■□□□□ 0.76
ITGB1-207ENST00000439974 SLF2Q8IX21 1173 aa19.77■□□□□ 0.76
ITGB1-207ENST00000439974 BTBD19C9JJ37 291 aa19.76■□□□□ 0.75
ITGB1-207ENST00000439974 SURF6O75683 361 aaKnown RBP19.76■□□□□ 0.75
ITGB1-207ENST00000439974 G3BP1Q13283 466 aaKnown RBP eCLIP19.76■□□□□ 0.75
ITGB1-207ENST00000439974 OS9Q13438 667 aaPredicted RBP19.76■□□□□ 0.75
ITGB1-207ENST00000439974 ARHGEF6Q15052 776 aa19.76■□□□□ 0.75
ITGB1-207ENST00000439974 SPTY2D1Q68D10 685 aaPredicted RBP19.76■□□□□ 0.75
ITGB1-207ENST00000439974 IDI2Q9BXS1 227 aa19.76■□□□□ 0.75
ITGB1-207ENST00000439974 DOCK2Q92608 1830 aa19.75■□□□□ 0.75
ITGB1-207ENST00000439974 ENTPD3O75355 529 aa19.75■□□□□ 0.75
ITGB1-207ENST00000439974 RGS3P49796 1198 aa19.75■□□□□ 0.75
ITGB1-207ENST00000439974 NOL9Q5SY16 702 aaKnown RBP19.75■□□□□ 0.75
ITGB1-207ENST00000439974 SIRT2Q8IXJ6 389 aa19.75■□□□□ 0.75
ITGB1-207ENST00000439974 FAM163AQ96GL9 167 aaPredicted RBP19.75■□□□□ 0.75
ITGB1-207ENST00000439974 NEUROD6Q96NK8 337 aa19.75■□□□□ 0.75
ITGB1-207ENST00000439974 CRBNQ96SW2 442 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms