RNA–Protein interactions for RNA: ENST00000439790.5

LINC00460-202, long intergenic non-protein coding RNA 460, humanhuman

TSL 1 (best)

Gene LINC00460, Length 497 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00460-202ENST00000439790 CCDC73Q6ZRK6 1079 aa8.12□□□□□ -1.11
LINC00460-202ENST00000439790 MMS22LQ6ZRQ5 1243 aa8.12□□□□□ -1.11
LINC00460-202ENST00000439790 PAXIP1Q6ZW49 1069 aaPredicted RBP8.12□□□□□ -1.11
LINC00460-202ENST00000439790 HDXQ7Z353 690 aa8.12□□□□□ -1.11
LINC00460-202ENST00000439790 LUZP1Q86V48 1076 aa8.12□□□□□ -1.11
LINC00460-202ENST00000439790 ZNF592Q92610 1267 aa8.12□□□□□ -1.11
LINC00460-202ENST00000439790 SECISBP2LQ93073 1101 aaKnown RBP8.12□□□□□ -1.11
LINC00460-202ENST00000439790 STK31Q9BXU1 1019 aa8.12□□□□□ -1.11
LINC00460-202ENST00000439790 GGNBP2Q9H3C7 697 aa8.12□□□□□ -1.11
LINC00460-202ENST00000439790 SNRKQ9NRH2 765 aa8.12□□□□□ -1.11
LINC00460-202ENST00000439790 ATG3Q9NT62 314 aa8.12□□□□□ -1.11
LINC00460-202ENST00000439790 PDRG1Q9NUG6 133 aa8.12□□□□□ -1.11
LINC00460-202ENST00000439790 RNF181Q9P0P0 153 aa8.12□□□□□ -1.11
LINC00460-202ENST00000439790 ADAM21Q9UKJ8 722 aa8.12□□□□□ -1.11
LINC00460-202ENST00000439790 RRP15Q9Y3B9 282 aaKnown RBP8.12□□□□□ -1.11
LINC00460-202ENST00000439790 PKD1L3Q7Z443 1732 aa8.12□□□□□ -1.11
LINC00460-202ENST00000439790 FAM177BA6PVY3 158 aa8.11□□□□□ -1.11
LINC00460-202ENST00000439790 POTECB2RU33 542 aa8.11□□□□□ -1.11
LINC00460-202ENST00000439790 MAP2K7O14733 419 aa8.11□□□□□ -1.11
LINC00460-202ENST00000439790 KINO60870 393 aaKnown RBP8.11□□□□□ -1.11
LINC00460-202ENST00000439790 DPEP1P16444 411 aa8.11□□□□□ -1.11
LINC00460-202ENST00000439790 USP5P45974 858 aa8.11□□□□□ -1.11
LINC00460-202ENST00000439790 VEGFBP49765 207 aa8.11□□□□□ -1.11
LINC00460-202ENST00000439790 IQCB1Q15051 598 aa8.11□□□□□ -1.11
LINC00460-202ENST00000439790 DNAJC21Q5F1R6 531 aaKnown RBP8.11□□□□□ -1.11
LINC00460-202ENST00000439790 LARP1BQ659C4 914 aaKnown RBP8.11□□□□□ -1.11
LINC00460-202ENST00000439790 SYT10Q6XYQ8 523 aa8.11□□□□□ -1.11
LINC00460-202ENST00000439790 RUFY3Q7L099 469 aa8.11□□□□□ -1.11
LINC00460-202ENST00000439790 TTC6Q86TZ1 520 aa8.11□□□□□ -1.11
LINC00460-202ENST00000439790 TSPYL6Q8N831 410 aa8.11□□□□□ -1.11
LINC00460-202ENST00000439790 C8orf58Q8NAV2 365 aa8.11□□□□□ -1.11
LINC00460-202ENST00000439790 CTCFLQ8NI51 663 aaPredicted RBP8.11□□□□□ -1.11
LINC00460-202ENST00000439790 BICD2Q8TD16 824 aa8.11□□□□□ -1.11
LINC00460-202ENST00000439790 DDX54Q8TDD1 881 aaKnown RBP8.11□□□□□ -1.11
LINC00460-202ENST00000439790 JARID2Q92833 1246 aaPredicted RBP8.11□□□□□ -1.11
LINC00460-202ENST00000439790 KHSRPQ92945 711 aaKnown RBP eCLIP8.11□□□□□ -1.11
LINC00460-202ENST00000439790 RILPL2Q969X0 211 aa8.11□□□□□ -1.11
LINC00460-202ENST00000439790 ZNF396Q96N95 335 aaPredicted RBP8.11□□□□□ -1.11
LINC00460-202ENST00000439790 LLPHQ9BRT6 129 aaKnown RBP8.11□□□□□ -1.11
LINC00460-202ENST00000439790 LSG1Q9H089 658 aaKnown RBP8.11□□□□□ -1.11
LINC00460-202ENST00000439790 VIPAS39Q9H9C1 493 aa8.11□□□□□ -1.11
LINC00460-202ENST00000439790 ZNF446Q9NWS9 450 aa8.11□□□□□ -1.11
LINC00460-202ENST00000439790 DACT1Q9NYF0 836 aa8.11□□□□□ -1.11
LINC00460-202ENST00000439790 VPS37CA5D8V6 355 aaPredicted RBP8.1□□□□□ -1.11
LINC00460-202ENST00000439790 SRGAP3O43295 1099 aa8.1□□□□□ -1.11
LINC00460-202ENST00000439790 SMC2O95347 1197 aa8.1□□□□□ -1.11
LINC00460-202ENST00000439790 IL2RBP14784 551 aa8.1□□□□□ -1.11
LINC00460-202ENST00000439790 KCNA3P22001 575 aa8.1□□□□□ -1.11
LINC00460-202ENST00000439790 SATB1Q01826 763 aa8.1□□□□□ -1.11
LINC00460-202ENST00000439790 LRMPQ12912 555 aa8.1□□□□□ -1.11
LINC00460-202ENST00000439790 NKX1-1Q15270 411 aaPredicted RBP8.1□□□□□ -1.11
LINC00460-202ENST00000439790 TSGA10IPQ3SY00 556 aa8.1□□□□□ -1.11
LINC00460-202ENST00000439790 HSP90B2PQ58FF3 399 aa8.1□□□□□ -1.11
LINC00460-202ENST00000439790 HSP90AB3PQ58FF7 597 aa8.1□□□□□ -1.11
LINC00460-202ENST00000439790 TTLL5Q6EMB2 1281 aa8.1□□□□□ -1.11
LINC00460-202ENST00000439790 NAA16Q6N069 864 aaPredicted RBP8.1□□□□□ -1.11
LINC00460-202ENST00000439790 ANKRD13DQ6ZTN6 518 aa8.1□□□□□ -1.11
LINC00460-202ENST00000439790 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.1□□□□□ -1.11
LINC00460-202ENST00000439790 TMC2Q8TDI7 906 aa8.1□□□□□ -1.11
LINC00460-202ENST00000439790 OTUD7AQ8TE49 926 aaPredicted RBP8.1□□□□□ -1.11
LINC00460-202ENST00000439790 SSH3Q8TE77 659 aa8.1□□□□□ -1.11
LINC00460-202ENST00000439790 LEO1Q8WVC0 666 aaPredicted RBP8.1□□□□□ -1.11
LINC00460-202ENST00000439790 AIDAQ96BJ3 306 aa8.1□□□□□ -1.11
LINC00460-202ENST00000439790 MEIS3Q99687 375 aa8.1□□□□□ -1.11
LINC00460-202ENST00000439790 UPF3BQ9BZI7 483 aaKnown RBP8.1□□□□□ -1.11
LINC00460-202ENST00000439790 RAI14Q9P0K7 980 aa8.1□□□□□ -1.11
LINC00460-202ENST00000439790 POLKQ9UBT6 870 aa8.1□□□□□ -1.11
LINC00460-202ENST00000439790 IQSEC3Q9UPP2 1182 aaPredicted RBP8.1□□□□□ -1.11
LINC00460-202ENST00000439790 PDE4DIPQ5VU43 2346 aa8.1□□□□□ -1.11
LINC00460-202ENST00000439790 TNRC6CQ9HCJ0 1690 aaKnown RBP8.1□□□□□ -1.11
LINC00460-202ENST00000439790 RGPD5Q99666 1765 aa8.1□□□□□ -1.11
LINC00460-202ENST00000439790 ATXN2Q99700 1313 aaKnown RBP8.09□□□□□ -1.11
LINC00460-202ENST00000439790 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.09□□□□□ -1.11
LINC00460-202ENST00000439790 IKBKBO14920 756 aa8.09□□□□□ -1.11
LINC00460-202ENST00000439790 PPFIA4O75335 1185 aa8.09□□□□□ -1.11
LINC00460-202ENST00000439790 TADA3O75528 432 aa8.09□□□□□ -1.11
LINC00460-202ENST00000439790 HSP90B1P14625 803 aaKnown RBP8.09□□□□□ -1.11
LINC00460-202ENST00000439790 MAP3K9P80192 1104 aa8.09□□□□□ -1.11
LINC00460-202ENST00000439790 ERCC6LQ2NKX8 1250 aa8.09□□□□□ -1.11
LINC00460-202ENST00000439790 CT47A1Q5JQC4 288 aaPredicted RBP8.09□□□□□ -1.11
LINC00460-202ENST00000439790 CCDC30Q5VVM6 783 aa8.09□□□□□ -1.11
LINC00460-202ENST00000439790 CC2D1AQ6P1N0 951 aaPredicted RBP8.09□□□□□ -1.11
LINC00460-202ENST00000439790 CCAR1Q8IX12 1150 aaKnown RBP8.09□□□□□ -1.11
LINC00460-202ENST00000439790 CEP112Q8N8E3 955 aa8.09□□□□□ -1.11
LINC00460-202ENST00000439790 FAM71BQ8TC56 605 aa8.09□□□□□ -1.11
LINC00460-202ENST00000439790 GOLGA1Q92805 767 aa8.09□□□□□ -1.11
LINC00460-202ENST00000439790 PPP1R13BQ96KQ4 1090 aa8.09□□□□□ -1.11
LINC00460-202ENST00000439790 NFAT5O94916 1531 aa8.08□□□□□ -1.12
LINC00460-202ENST00000439790 A0A1W2PQ27 194 aa8.08□□□□□ -1.12
LINC00460-202ENST00000439790 A0A1W2PQ64 194 aa8.08□□□□□ -1.12
LINC00460-202ENST00000439790 A0A1W2PQD8 194 aa8.08□□□□□ -1.12
LINC00460-202ENST00000439790 ARHGAP6O43182 974 aa8.08□□□□□ -1.12
LINC00460-202ENST00000439790 CLSTN1O94985 981 aa8.08□□□□□ -1.12
LINC00460-202ENST00000439790 OAS2P29728 719 aaKnown RBP8.08□□□□□ -1.12
LINC00460-202ENST00000439790 MAP2K2P36507 400 aa8.08□□□□□ -1.12
LINC00460-202ENST00000439790 TXLNAP40222 546 aa8.08□□□□□ -1.12
LINC00460-202ENST00000439790 RASSF7Q02833 373 aa8.08□□□□□ -1.12
LINC00460-202ENST00000439790 FAM160A1Q05DH4 1040 aa8.08□□□□□ -1.12
LINC00460-202ENST00000439790 DDR1Q08345 913 aa8.08□□□□□ -1.12
LINC00460-202ENST00000439790 NBPF20Q3BBV1 942 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms