RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 FEZ2Q9UHY8 353 aaPredicted RBP10.35□□□□□ -0.75
COPB1-202ENST00000439561 SOWAHDA6NJG2 315 aa10.35□□□□□ -0.75
COPB1-202ENST00000439561 SASH3O75995 380 aa10.35□□□□□ -0.75
COPB1-202ENST00000439561 KIF23Q02241 960 aaPredicted RBP10.35□□□□□ -0.75
COPB1-202ENST00000439561 TMEM67Q5HYA8 995 aa10.35□□□□□ -0.75
COPB1-202ENST00000439561 IGSF22Q8N9C0 903 aa10.35□□□□□ -0.75
COPB1-202ENST00000439561 KCNH5Q8NCM2 988 aa10.35□□□□□ -0.75
COPB1-202ENST00000439561 STAMQ92783 540 aa10.35□□□□□ -0.75
COPB1-202ENST00000439561 TMEM2Q9UHN6 1383 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 B4E1Z4 1266 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 AKR1B15C9JRZ8 316 aaPredicted RBP10.34□□□□□ -0.75
COPB1-202ENST00000439561 IFIT3O14879 490 aaKnown RBP10.34□□□□□ -0.75
COPB1-202ENST00000439561 ZBTB43O43298 467 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 FGAP02671 866 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 TATP17735 454 aaPredicted RBP10.34□□□□□ -0.75
COPB1-202ENST00000439561 GTF2A1P52655 376 aaPredicted RBP10.34□□□□□ -0.75
COPB1-202ENST00000439561 TRIM22Q8IYM9 498 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 OSBP2Q969R2 916 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 PXDNLA1KZ92 1463 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 CTAGE15A4D2H0 777 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 CTAGE9A4FU28 777 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 TBC1D8O95759 1140 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 CTAGE8P0CG41 777 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 PI16Q6UXB8 463 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 HDXQ7Z353 690 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 CTAGE6Q86UF2 777 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 CTAGE4Q8IX94 777 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 CMTR1Q8N1G2 835 aaKnown RBP10.34□□□□□ -0.75
COPB1-202ENST00000439561 CAPZA3Q96KX2 299 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 ZKSCAN3Q9BRR0 538 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 KCNJ14Q9UNX9 436 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 FAN1Q9Y2M0 1017 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 RRP15Q9Y3B9 282 aaKnown RBP10.34□□□□□ -0.75
COPB1-202ENST00000439561 SLC12A7Q9Y666 1083 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 COL15A1P39059 1388 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 VWA3AA6NCI4 1184 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 IKBKBO14920 756 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 TXLNAP40222 546 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 GPATCH11Q8N954 259 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 ANKRD20A12PQ8NF67 263 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 IPO4Q8TEX9 1081 aaKnown RBP10.34□□□□□ -0.75
COPB1-202ENST00000439561 SUGCTQ9HAC7 445 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 SAMSN1Q9NSI8 373 aaKnown RBP10.34□□□□□ -0.75
COPB1-202ENST00000439561 SERTAD1Q9UHV2 236 aa10.34□□□□□ -0.75
COPB1-202ENST00000439561 CLTCQ00610 1675 aaKnown RBP10.34□□□□□ -0.75
COPB1-202ENST00000439561 MROH7-TTC4A0A0A0MT08 1334 aa10.33□□□□□ -0.75
COPB1-202ENST00000439561 ERBB3P21860 1342 aa10.33□□□□□ -0.75
COPB1-202ENST00000439561 ERICH2A1L162 156 aa10.33□□□□□ -0.76
COPB1-202ENST00000439561 SSRP1Q08945 709 aaKnown RBP10.33□□□□□ -0.76
COPB1-202ENST00000439561 NCAPHQ15003 741 aa10.33□□□□□ -0.76
COPB1-202ENST00000439561 SLC39A14Q15043 492 aa10.33□□□□□ -0.76
COPB1-202ENST00000439561 KRI1Q8N9T8 703 aaKnown RBP10.33□□□□□ -0.76
COPB1-202ENST00000439561 RABGGTAQ92696 567 aa10.33□□□□□ -0.76
COPB1-202ENST00000439561 PUS3Q9BZE2 481 aaKnown RBP10.33□□□□□ -0.76
COPB1-202ENST00000439561 GUCA1BQ9UMX6 200 aa10.33□□□□□ -0.76
COPB1-202ENST00000439561 PREX1Q8TCU6 1659 aa10.33□□□□□ -0.76
COPB1-202ENST00000439561 N4BP3O15049 544 aa10.33□□□□□ -0.76
COPB1-202ENST00000439561 IPO7O95373 1038 aaKnown RBP10.33□□□□□ -0.76
COPB1-202ENST00000439561 SNRPA1P09661 255 aaKnown RBP10.33□□□□□ -0.76
COPB1-202ENST00000439561 ZMYM1Q5SVZ6 1142 aa10.33□□□□□ -0.76
COPB1-202ENST00000439561 NUTM2AQ8IVF1 878 aaPredicted RBP10.33□□□□□ -0.76
COPB1-202ENST00000439561 REXO1L1PQ8IX06 675 aa10.33□□□□□ -0.76
COPB1-202ENST00000439561 RGS22Q8NE09 1264 aa10.33□□□□□ -0.76
COPB1-202ENST00000439561 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.33□□□□□ -0.765e-7■■■□□ 17.7
COPB1-202ENST00000439561 CNNM1Q9NRU3 951 aa10.33□□□□□ -0.76
COPB1-202ENST00000439561 GPAA1O43292 621 aa10.32□□□□□ -0.76
COPB1-202ENST00000439561 GCP02774 474 aa10.32□□□□□ -0.76
COPB1-202ENST00000439561 IL15P40933 162 aaPredicted RBP10.32□□□□□ -0.76
COPB1-202ENST00000439561 EXOSC10Q01780 885 aaKnown RBP10.32□□□□□ -0.76
COPB1-202ENST00000439561 POSTNQ15063 836 aa10.32□□□□□ -0.76
COPB1-202ENST00000439561 CCDC93Q567U6 631 aa10.32□□□□□ -0.76
COPB1-202ENST00000439561 METTL24Q5JXM2 366 aa10.32□□□□□ -0.76
COPB1-202ENST00000439561 SLC9C2Q5TAH2 1124 aa10.32□□□□□ -0.76
COPB1-202ENST00000439561 CEP112Q8N8E3 955 aa10.32□□□□□ -0.76
COPB1-202ENST00000439561 SMARCC1Q92922 1105 aaPredicted RBP10.32□□□□□ -0.76
COPB1-202ENST00000439561 IBSPP21815 317 aaPredicted RBP10.32□□□□□ -0.76
COPB1-202ENST00000439561 ZAP70P43403 619 aa10.32□□□□□ -0.76
COPB1-202ENST00000439561 IRX3P78415 501 aaPredicted RBP10.32□□□□□ -0.76
COPB1-202ENST00000439561 FKBP15Q5T1M5 1219 aa10.32□□□□□ -0.76
COPB1-202ENST00000439561 TRIM65Q6PJ69 517 aa10.32□□□□□ -0.76
COPB1-202ENST00000439561 SHC4Q6S5L8 630 aa10.32□□□□□ -0.76
COPB1-202ENST00000439561 GOLGA5Q8TBA6 731 aa10.32□□□□□ -0.76
COPB1-202ENST00000439561 AIDAQ96BJ3 306 aa10.32□□□□□ -0.76
COPB1-202ENST00000439561 CDC5LQ99459 802 aaKnown RBP10.32□□□□□ -0.76
COPB1-202ENST00000439561 CRACR2AQ9BSW2 395 aa10.32□□□□□ -0.76
COPB1-202ENST00000439561 CWC25Q9NXE8 425 aaPredicted RBP10.32□□□□□ -0.76
COPB1-202ENST00000439561 LCMT1Q9UIC8 334 aa10.32□□□□□ -0.76
COPB1-202ENST00000439561 BTBD18B2RXH4 712 aa10.32□□□□□ -0.76
COPB1-202ENST00000439561 STX10O60499 249 aa10.32□□□□□ -0.76
COPB1-202ENST00000439561 TFRCP02786 760 aaKnown RBP10.32□□□□□ -0.76
COPB1-202ENST00000439561 IVLP07476 585 aa10.32□□□□□ -0.76
COPB1-202ENST00000439561 ADORA1P30542 326 aa10.32□□□□□ -0.76
COPB1-202ENST00000439561 ACTN2P35609 894 aa10.32□□□□□ -0.76
COPB1-202ENST00000439561 PDE4BQ07343 736 aa10.32□□□□□ -0.76
COPB1-202ENST00000439561 TTC31Q49AM3 519 aaPredicted RBP10.32□□□□□ -0.76
COPB1-202ENST00000439561 DNAJC21Q5F1R6 531 aaKnown RBP10.32□□□□□ -0.76
COPB1-202ENST00000439561 SMYD4Q8IYR2 804 aaPredicted RBP10.32□□□□□ -0.76
COPB1-202ENST00000439561 DRC1Q96MC2 740 aa10.32□□□□□ -0.76
COPB1-202ENST00000439561 GBP3Q9H0R5 595 aa10.32□□□□□ -0.76
COPB1-202ENST00000439561 VPS16Q9H269 839 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms