RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 GPC2Q8N158 579 aa24.78■■□□□ 1.56
CHD3-204ENST00000439235 ZDHHC15Q96MV8 337 aa24.78■■□□□ 1.56
CHD3-204ENST00000439235 USP26Q9BXU7 913 aa24.78■■□□□ 1.56
CHD3-204ENST00000439235 CRNKL1Q9BZJ0 848 aaKnown RBP24.78■■□□□ 1.56
CHD3-204ENST00000439235 HSPD1P10809 573 aaKnown RBP24.77■■□□□ 1.56
CHD3-204ENST00000439235 DYNLL1P63167 89 aaKnown RBP24.77■■□□□ 1.56
CHD3-204ENST00000439235 PTH1RQ03431 593 aa24.77■■□□□ 1.56
CHD3-204ENST00000439235 DPF2Q92785 391 aa24.77■■□□□ 1.56
CHD3-204ENST00000439235 SLC4A4Q9Y6R1 1079 aa24.77■■□□□ 1.56
CHD3-204ENST00000439235 U3KPZ7 1027 aaPredicted RBP24.77■■□□□ 1.56
CHD3-204ENST00000439235 MYH2Q9UKX2 1941 aa24.76■■□□□ 1.55
CHD3-204ENST00000439235 GMPSP49915 693 aaPredicted RBP24.76■■□□□ 1.55
CHD3-204ENST00000439235 RBM5P52756 815 aaKnown RBP eCLIP24.76■■□□□ 1.55
CHD3-204ENST00000439235 C1QTNF8P60827 252 aa24.76■■□□□ 1.55
CHD3-204ENST00000439235 MAP4K1Q92918 833 aa24.76■■□□□ 1.55
CHD3-204ENST00000439235 PATL2C9JE40 543 aaKnown RBP24.75■■□□□ 1.55
CHD3-204ENST00000439235 CFAP100Q494V2 611 aa24.75■■□□□ 1.55
CHD3-204ENST00000439235 VPS53Q5VIR6 699 aa24.75■■□□□ 1.55
CHD3-204ENST00000439235 C22orf23Q9BZE7 217 aa24.75■■□□□ 1.55
CHD3-204ENST00000439235 NACAP1Q9BZK3 213 aa24.75■■□□□ 1.55
CHD3-204ENST00000439235 APPP05067 770 aa24.74■■□□□ 1.55
CHD3-204ENST00000439235 DDRGK1Q96HY6 314 aa24.74■■□□□ 1.55
CHD3-204ENST00000439235 RBM8AQ9Y5S9 174 aaKnown RBP24.74■■□□□ 1.55
CHD3-204ENST00000439235 ZMYM6O95789 1325 aa24.73■■□□□ 1.55
CHD3-204ENST00000439235 ZNF280AP59817 542 aaPredicted RBP24.73■■□□□ 1.55
CHD3-204ENST00000439235 DLGAP5Q15398 846 aa24.73■■□□□ 1.55
CHD3-204ENST00000439235 APOBEC3HQ6NTF7 200 aaKnown RBP24.73■■□□□ 1.55
CHD3-204ENST00000439235 SH3RF3Q8TEJ3 882 aaPredicted RBP24.73■■□□□ 1.55
CHD3-204ENST00000439235 CTNNA3Q9UI47 895 aa24.73■■□□□ 1.55
CHD3-204ENST00000439235 UTRNP46939 3433 aa24.73■■□□□ 1.55
CHD3-204ENST00000439235 ALX1Q15699 326 aa24.72■■□□□ 1.55
CHD3-204ENST00000439235 DPY19L2Q6NUT2 758 aa24.72■■□□□ 1.55
CHD3-204ENST00000439235 GIMAP6Q6P9H5 292 aa24.72■■□□□ 1.55
CHD3-204ENST00000439235 MICALL2Q8IY33 904 aa24.72■■□□□ 1.55
CHD3-204ENST00000439235 TEX11Q8IYF3 940 aa24.72■■□□□ 1.55
CHD3-204ENST00000439235 MTMR14Q8NCE2 650 aa24.72■■□□□ 1.55
CHD3-204ENST00000439235 TBC1D32Q96NH3 1257 aa24.72■■□□□ 1.55
CHD3-204ENST00000439235 ADAMTSL1Q8N6G6 1762 aa24.72■■□□□ 1.55
CHD3-204ENST00000439235 GSG1L2A8MUP6 293 aa24.71■■□□□ 1.55
CHD3-204ENST00000439235 FOXP2O15409 715 aa24.71■■□□□ 1.55
CHD3-204ENST00000439235 PRKAB2O43741 272 aa24.71■■□□□ 1.55
CHD3-204ENST00000439235 HSPA4P34932 840 aa24.71■■□□□ 1.55
CHD3-204ENST00000439235 USP5P45974 858 aa24.71■■□□□ 1.55
CHD3-204ENST00000439235 RHBDL3P58872 404 aa24.71■■□□□ 1.55
CHD3-204ENST00000439235 RNF20Q5VTR2 975 aa24.71■■□□□ 1.55
CHD3-204ENST00000439235 NAPBQ9H115 298 aa24.71■■□□□ 1.55
CHD3-204ENST00000439235 ATP8A2Q9NTI2 1148 aa24.71■■□□□ 1.55
CHD3-204ENST00000439235 USP40Q9NVE5 1235 aa24.71■■□□□ 1.55
CHD3-204ENST00000439235 SPDYE2BA6NHP3 402 aa24.7■■□□□ 1.54
CHD3-204ENST00000439235 SPDYE6P0CI01 402 aa24.7■■□□□ 1.54
CHD3-204ENST00000439235 TDO2P48775 406 aa24.7■■□□□ 1.54
CHD3-204ENST00000439235 RBM25P49756 843 aaKnown RBP24.7■■□□□ 1.54
CHD3-204ENST00000439235 IFNL3Q8IZI9 196 aa24.7■■□□□ 1.54
CHD3-204ENST00000439235 SDR42E1Q8WUS8 393 aa24.7■■□□□ 1.54
CHD3-204ENST00000439235 EPB41L4AQ9HCS5 686 aaPredicted RBP24.7■■□□□ 1.54
CHD3-204ENST00000439235 MYOZ2Q9NPC6 264 aa24.7■■□□□ 1.54
CHD3-204ENST00000439235 CNOT7Q9UIV1 285 aaKnown RBP24.7■■□□□ 1.54
CHD3-204ENST00000439235 H7C1D1 291 aa24.69■■□□□ 1.54
CHD3-204ENST00000439235 CDC42EP5Q6NZY7 148 aa24.69■■□□□ 1.54
CHD3-204ENST00000439235 GPRC5DQ9NZD1 345 aa24.69■■□□□ 1.54
CHD3-204ENST00000439235 DDNO94850 711 aaPredicted RBP24.68■■□□□ 1.54
CHD3-204ENST00000439235 FGAP02671 866 aa24.68■■□□□ 1.54
CHD3-204ENST00000439235 LMOD1P29536 600 aaPredicted RBP24.68■■□□□ 1.54
CHD3-204ENST00000439235 NECTIN1Q15223 517 aa24.68■■□□□ 1.54
CHD3-204ENST00000439235 TMOD2Q9NZR1 351 aa24.68■■□□□ 1.54
CHD3-204ENST00000439235 MYO1BO43795 1136 aa24.67■■□□□ 1.54
CHD3-204ENST00000439235 ZKSCAN1P17029 563 aaPredicted RBP24.67■■□□□ 1.54
CHD3-204ENST00000439235 IMMTQ16891 758 aaKnown RBP24.67■■□□□ 1.54
CHD3-204ENST00000439235 IFFO2Q5TF58 517 aa24.67■■□□□ 1.54
CHD3-204ENST00000439235 CREB3L3Q68CJ9 461 aa24.67■■□□□ 1.54
CHD3-204ENST00000439235 TGFBRAP1Q8WUH2 860 aa24.67■■□□□ 1.54
CHD3-204ENST00000439235 DCP1AQ9NPI6 582 aaPredicted RBP24.67■■□□□ 1.54
CHD3-204ENST00000439235 PCDHAC2Q9Y5I4 1007 aa24.67■■□□□ 1.54
CHD3-204ENST00000439235 SLC27A2O14975 620 aa24.66■■□□□ 1.54
CHD3-204ENST00000439235 ANAPC15P60006 121 aa24.66■■□□□ 1.54
CHD3-204ENST00000439235 ZBED3Q96IU2 234 aaPredicted RBP24.66■■□□□ 1.54
CHD3-204ENST00000439235 PRMT6Q96LA8 375 aaPredicted RBP24.66■■□□□ 1.54
CHD3-204ENST00000439235 ARPP21Q9UBL0 812 aaPredicted RBP24.66■■□□□ 1.54
CHD3-204ENST00000439235 SHTN1A0MZ66 631 aa24.65■■□□□ 1.54
CHD3-204ENST00000439235 GLTPD2A6NH11 291 aa24.65■■□□□ 1.54
CHD3-204ENST00000439235 WDHD1O75717 1129 aaPredicted RBP24.65■■□□□ 1.54
CHD3-204ENST00000439235 KIF4BQ2VIQ3 1234 aa24.65■■□□□ 1.54
CHD3-204ENST00000439235 AMOTL1Q8IY63 956 aa24.65■■□□□ 1.54
CHD3-204ENST00000439235 KCNB2Q92953 911 aa24.65■■□□□ 1.54
CHD3-204ENST00000439235 L3MBTL3Q96JM7 780 aaPredicted RBP24.65■■□□□ 1.54
CHD3-204ENST00000439235 TDRD3Q9H7E2 651 aaKnown RBP24.65■■□□□ 1.54
CHD3-204ENST00000439235 FLT1P17948 1338 aa24.64■■□□□ 1.54
CHD3-204ENST00000439235 ZNF213O14771 459 aa24.64■■□□□ 1.54
CHD3-204ENST00000439235 MAPKAPK5Q8IW41 473 aa24.64■■□□□ 1.54
CHD3-204ENST00000439235 IDI2Q9BXS1 227 aa24.64■■□□□ 1.54
CHD3-204ENST00000439235 MKRN1Q9UHC7 482 aaKnown RBP24.64■■□□□ 1.54
CHD3-204ENST00000439235 WNT10BO00744 389 aa24.63■■□□□ 1.53
CHD3-204ENST00000439235 NPM3O75607 178 aaKnown RBP24.63■■□□□ 1.53
CHD3-204ENST00000439235 PICALMQ13492 652 aa24.63■■□□□ 1.53
CHD3-204ENST00000439235 SPDYE2Q495Y8 402 aa24.63■■□□□ 1.53
CHD3-204ENST00000439235 TSHZ2Q9NRE2 1034 aa24.63■■□□□ 1.53
CHD3-204ENST00000439235 MCM9Q9NXL9 1143 aa24.63■■□□□ 1.53
CHD3-204ENST00000439235 NAV1Q8NEY1 1877 aa24.62■■□□□ 1.53
CHD3-204ENST00000439235 CYP21A2P08686 494 aa24.62■■□□□ 1.53
CHD3-204ENST00000439235 KRT32Q14532 448 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms