RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 PAG1Q9NWQ8 432 aa15.35■□□□□ 0.05
ACTN1-204ENST00000438964 CEBPAP49715 358 aaPredicted RBP15.35■□□□□ 0.05
ACTN1-204ENST00000438964 KIF23Q02241 960 aaPredicted RBP15.35■□□□□ 0.05
ACTN1-204ENST00000438964 C1orf141Q5JVX7 400 aa15.35■□□□□ 0.05
ACTN1-204ENST00000438964 FKBP15Q5T1M5 1219 aa15.35■□□□□ 0.05
ACTN1-204ENST00000438964 SMYD4Q8IYR2 804 aaPredicted RBP15.35■□□□□ 0.05
ACTN1-204ENST00000438964 KBTBD3Q8NAB2 608 aa15.35■□□□□ 0.05
ACTN1-204ENST00000438964 ACRBPQ8NEB7 543 aa15.35■□□□□ 0.05
ACTN1-204ENST00000438964 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.34■□□□□ 0.05
ACTN1-204ENST00000438964 CCP110O43303 1012 aa15.34■□□□□ 0.05
ACTN1-204ENST00000438964 NEXNQ0ZGT2 675 aa15.34■□□□□ 0.05
ACTN1-204ENST00000438964 LMBR1LQ6UX01 489 aa15.34■□□□□ 0.05
ACTN1-204ENST00000438964 RAD9BQ6WBX8 426 aa15.34■□□□□ 0.05
ACTN1-204ENST00000438964 MICU3Q86XE3 530 aa15.34■□□□□ 0.05
ACTN1-204ENST00000438964 GSPT2Q8IYD1 628 aaKnown RBP15.34■□□□□ 0.05
ACTN1-204ENST00000438964 RABGGTAQ92696 567 aa15.34■□□□□ 0.05
ACTN1-204ENST00000438964 EXOC4Q96A65 974 aa15.34■□□□□ 0.05
ACTN1-204ENST00000438964 TEX13AQ9BXU3 409 aaPredicted RBP15.34■□□□□ 0.05
ACTN1-204ENST00000438964 SEC31BQ9NQW1 1179 aa15.34■□□□□ 0.05
ACTN1-204ENST00000438964 EIF3CLB5ME19 914 aaKnown RBP15.34■□□□□ 0.05
ACTN1-204ENST00000438964 BEND6Q5SZJ8 279 aaPredicted RBP15.34■□□□□ 0.05
ACTN1-204ENST00000438964 NCAPH2Q6IBW4 605 aa15.34■□□□□ 0.05
ACTN1-204ENST00000438964 OSBP2Q969R2 916 aa15.34■□□□□ 0.05
ACTN1-204ENST00000438964 EIF3CQ99613 913 aaKnown RBP15.34■□□□□ 0.05
ACTN1-204ENST00000438964 BPIFA3Q9BQP9 254 aa15.34■□□□□ 0.05
ACTN1-204ENST00000438964 POLD4Q9HCU8 107 aa15.34■□□□□ 0.05
ACTN1-204ENST00000438964 PALLDQ8WX93 1383 aa15.34■□□□□ 0.05
ACTN1-204ENST00000438964 CMA1P23946 247 aa15.33■□□□□ 0.05
ACTN1-204ENST00000438964 VPS37DQ86XT2 251 aa15.33■□□□□ 0.05
ACTN1-204ENST00000438964 CMTR1Q8N1G2 835 aaKnown RBP15.33■□□□□ 0.05
ACTN1-204ENST00000438964 NOA1Q8NC60 698 aaKnown RBP15.33■□□□□ 0.05
ACTN1-204ENST00000438964 HAUS7Q99871 368 aa15.33■□□□□ 0.05
ACTN1-204ENST00000438964 POLR3EQ9NVU0 708 aa15.33■□□□□ 0.05
ACTN1-204ENST00000438964 HPS5Q9UPZ3 1129 aa15.33■□□□□ 0.05
ACTN1-204ENST00000438964 FMN2Q9NZ56 1722 aa15.33■□□□□ 0.04
ACTN1-204ENST00000438964 A0A087WZG4 1122 aa15.33■□□□□ 0.04
ACTN1-204ENST00000438964 RNMTO43148 476 aaKnown RBP15.33■□□□□ 0.04
ACTN1-204ENST00000438964 CBFA2T2O43439 604 aa15.33■□□□□ 0.04
ACTN1-204ENST00000438964 CDC25AP30304 524 aa15.33■□□□□ 0.04
ACTN1-204ENST00000438964 CEMIPQ8WUJ3 1361 aa15.33■□□□□ 0.04
ACTN1-204ENST00000438964 CUTAO60888 179 aa15.33■□□□□ 0.04
ACTN1-204ENST00000438964 DDX58O95786 925 aaKnown RBP15.33■□□□□ 0.04
ACTN1-204ENST00000438964 TPM1P09493 284 aa15.33■□□□□ 0.04
ACTN1-204ENST00000438964 MRPS25P82663 173 aaKnown RBP15.33■□□□□ 0.04
ACTN1-204ENST00000438964 AKAP17AQ02040 695 aaKnown RBP15.33■□□□□ 0.04
ACTN1-204ENST00000438964 TTC19Q6DKK2 380 aaPredicted RBP15.33■□□□□ 0.04
ACTN1-204ENST00000438964 FAM204AQ9H8W3 233 aa15.33■□□□□ 0.04
ACTN1-204ENST00000438964 JCADQ9P266 1359 aa15.32■□□□□ 0.04
ACTN1-204ENST00000438964 LRRIQ3A6PVS8 624 aaPredicted RBP15.32■□□□□ 0.04
ACTN1-204ENST00000438964 IKBKBO14920 756 aa15.32■□□□□ 0.04
ACTN1-204ENST00000438964 PDIA6Q15084 440 aa15.32■□□□□ 0.04
ACTN1-204ENST00000438964 LRRC24Q50LG9 513 aa15.32■□□□□ 0.04
ACTN1-204ENST00000438964 STAMQ92783 540 aa15.32■□□□□ 0.04
ACTN1-204ENST00000438964 ALG1Q9BT22 464 aa15.32■□□□□ 0.04
ACTN1-204ENST00000438964 ENC1O14682 589 aa15.32■□□□□ 0.04
ACTN1-204ENST00000438964 YEATS4O95619 227 aa15.32■□□□□ 0.04
ACTN1-204ENST00000438964 HMGB1P09429 215 aaKnown RBP15.32■□□□□ 0.04
ACTN1-204ENST00000438964 TTC31Q49AM3 519 aaPredicted RBP15.32■□□□□ 0.04
ACTN1-204ENST00000438964 SPECC1LQ69YQ0 1117 aa15.32■□□□□ 0.04
ACTN1-204ENST00000438964 USP49Q70CQ1 688 aa15.32■□□□□ 0.04
ACTN1-204ENST00000438964 SLC35F6Q8N357 371 aa15.32■□□□□ 0.04
ACTN1-204ENST00000438964 EHD4Q9H223 541 aa15.32■□□□□ 0.04
ACTN1-204ENST00000438964 MED15Q96RN5 788 aa15.31■□□□□ 0.04
ACTN1-204ENST00000438964 TRIM10Q9UDY6 481 aa15.31■□□□□ 0.04
ACTN1-204ENST00000438964 KCNH3Q9ULD8 1083 aa15.31■□□□□ 0.04
ACTN1-204ENST00000438964 CCDC151A5D8V7 595 aa15.31■□□□□ 0.04
ACTN1-204ENST00000438964 KCNJ6P48051 423 aa15.31■□□□□ 0.04
ACTN1-204ENST00000438964 RBL2Q08999 1139 aa15.31■□□□□ 0.04
ACTN1-204ENST00000438964 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.31■□□□□ 0.04
ACTN1-204ENST00000438964 JRKLQ9Y4A0 524 aa15.31■□□□□ 0.04
ACTN1-204ENST00000438964 LAMA4Q16363 1823 aa15.31■□□□□ 0.04
ACTN1-204ENST00000438964 RGPD8O14715 1765 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-204ENST00000438964 MAP2K7O14733 419 aa15.3■□□□□ 0.04
ACTN1-204ENST00000438964 POLR2DO15514 142 aaKnown RBP15.3■□□□□ 0.04
ACTN1-204ENST00000438964 A1BGP04217 495 aa15.3■□□□□ 0.04
ACTN1-204ENST00000438964 IBSPP21815 317 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-204ENST00000438964 CASP8Q14790 479 aa15.3■□□□□ 0.04
ACTN1-204ENST00000438964 ICE2Q659A1 982 aa15.3■□□□□ 0.04
ACTN1-204ENST00000438964 LRRC31Q6UY01 552 aa15.3■□□□□ 0.04
ACTN1-204ENST00000438964 SRGAP1Q7Z6B7 1085 aa15.3■□□□□ 0.04
ACTN1-204ENST00000438964 GPIHBP1Q8IV16 184 aa15.3■□□□□ 0.04
ACTN1-204ENST00000438964 ZNF274Q96GC6 653 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-204ENST00000438964 IFIT1P09914 478 aaKnown RBP15.3■□□□□ 0.04
ACTN1-204ENST00000438964 CCT6AP40227 531 aaKnown RBP15.3■□□□□ 0.04
ACTN1-204ENST00000438964 AFMP43652 599 aa15.3■□□□□ 0.04
ACTN1-204ENST00000438964 RFX5P48382 616 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-204ENST00000438964 ANTXR2P58335 489 aa15.3■□□□□ 0.04
ACTN1-204ENST00000438964 SLC39A14Q15043 492 aa15.3■□□□□ 0.04
ACTN1-204ENST00000438964 SLC9C2Q5TAH2 1124 aa15.3■□□□□ 0.04
ACTN1-204ENST00000438964 KRT40Q6A162 431 aa15.3■□□□□ 0.04
ACTN1-204ENST00000438964 PUS3Q9BZE2 481 aaKnown RBP15.3■□□□□ 0.04
ACTN1-204ENST00000438964 MYH15Q9Y2K3 1946 aa15.3■□□□□ 0.04
ACTN1-204ENST00000438964 NWD1Q149M9 1564 aa15.3■□□□□ 0.04
ACTN1-204ENST00000438964 FGAP02671 866 aa15.3■□□□□ 0.04
ACTN1-204ENST00000438964 CCDC102BQ68D86 513 aa15.3■□□□□ 0.04
ACTN1-204ENST00000438964 HDXQ7Z353 690 aa15.3■□□□□ 0.04
ACTN1-204ENST00000438964 CAPZA3Q96KX2 299 aa15.3■□□□□ 0.04
ACTN1-204ENST00000438964 C19orf44Q9H6X5 657 aa15.3■□□□□ 0.04
ACTN1-204ENST00000438964 HDAC6Q9UBN7 1215 aa15.3■□□□□ 0.04
ACTN1-204ENST00000438964 SERTAD1Q9UHV2 236 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 442 ms