RNA–Protein interactions for RNA: ENST00000438581.6

TMEM39A-202, Transcript of transmembrane protein 39A, humanhuman

TSL 1 (best)

Gene TMEM39A, Length 4,393 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-202ENST00000438581 SDR42E1Q8WUS8 393 aa9.32□□□□□ -0.92
TMEM39A-202ENST00000438581 USP25Q9UHP3 1055 aa9.32□□□□□ -0.92
TMEM39A-202ENST00000438581 NCAPD2Q15021 1401 aa9.32□□□□□ -0.92
TMEM39A-202ENST00000438581 TNNT3P45378 269 aaPredicted RBP9.32□□□□□ -0.92
TMEM39A-202ENST00000438581 OSBPL3Q9H4L5 887 aa9.32□□□□□ -0.92
TMEM39A-202ENST00000438581 CRB1P82279 1406 aa9.32□□□□□ -0.92
TMEM39A-202ENST00000438581 LOC102724159A0A0B4J2E5 919 aa9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 SERPINB2P05120 415 aa9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 HSPD1P10809 573 aaKnown RBP9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 POLA2Q14181 598 aa9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 PWP2Q15269 919 aaKnown RBP9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 MFSD14BQ5SR56 506 aa9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 TANGO6Q9C0B7 1094 aa9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 DACH1Q9UI36 760 aa9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 KCNG1Q9UIX4 513 aa9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 ERVV-1B6SEH8 477 aa9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 E7EWF7 191 aa9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 TCP10Q12799 353 aa9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 DOK7Q18PE1 504 aa9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 CFAP100Q494V2 611 aa9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 LARGE2Q8N3Y3 721 aa9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 DDX19AQ9NUU7 478 aaKnown RBP9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 TMEM51Q9NW97 253 aa9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 DACT1Q9NYF0 836 aa9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 ANGEL1Q9UNK9 670 aaKnown RBP9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 R3HCC1Q9Y3T6 440 aaKnown RBP9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 USP17L12C9JPN9 530 aa9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 USP17L21D6R901 530 aa9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 KIF3CO14782 793 aa9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 JAK2O60674 1132 aa9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 CYP19A1P11511 503 aaPredicted RBP9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 UBA7P41226 1012 aa9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 TGFBRAP1Q8WUH2 860 aa9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 MYCBPQ99417 103 aaPredicted RBP9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 ANO10Q9NW15 660 aa9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 GJA3Q9Y6H8 435 aa9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 CCDC12Q8WUD4 166 aaPredicted RBP9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 RIPOR2Q9Y4F9 1068 aa9.31□□□□□ -0.92
TMEM39A-202ENST00000438581 FGAP02671 866 aa9.3□□□□□ -0.92
TMEM39A-202ENST00000438581 ADCK5Q3MIX3 580 aa9.3□□□□□ -0.92
TMEM39A-202ENST00000438581 ZNF772Q68DY9 489 aaPredicted RBP9.3□□□□□ -0.92
TMEM39A-202ENST00000438581 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.3□□□□□ -0.92
TMEM39A-202ENST00000438581 TTC6Q86TZ1 520 aa9.3□□□□□ -0.92
TMEM39A-202ENST00000438581 ZNF589Q86UQ0 364 aaPredicted RBP9.3□□□□□ -0.92
TMEM39A-202ENST00000438581 NLGN1Q8N2Q7 840 aa9.3□□□□□ -0.92
TMEM39A-202ENST00000438581 GOLGA6L1Q8N7Z2 621 aa9.3□□□□□ -0.92
TMEM39A-202ENST00000438581 CUL5Q93034 780 aa9.3□□□□□ -0.92
TMEM39A-202ENST00000438581 hCG_1642624A0A1W2PR95 340 aa9.3□□□□□ -0.92
TMEM39A-202ENST00000438581 IDEP14735 1019 aa9.3□□□□□ -0.92
TMEM39A-202ENST00000438581 NAPAP54920 295 aa9.3□□□□□ -0.92
TMEM39A-202ENST00000438581 ZSCAN23Q3MJ62 389 aa9.3□□□□□ -0.92
TMEM39A-202ENST00000438581 HSP90B2PQ58FF3 399 aa9.3□□□□□ -0.92
TMEM39A-202ENST00000438581 PHKBQ93100 1093 aa9.3□□□□□ -0.92
TMEM39A-202ENST00000438581 ADCY9O60503 1353 aa9.3□□□□□ -0.92
TMEM39A-202ENST00000438581 ZNF165P49910 485 aa9.3□□□□□ -0.92
TMEM39A-202ENST00000438581 GNAQP50148 359 aa9.3□□□□□ -0.92
TMEM39A-202ENST00000438581 SLFNL1Q499Z3 407 aa9.3□□□□□ -0.92
TMEM39A-202ENST00000438581 UBA5Q9GZZ9 404 aa9.3□□□□□ -0.92
TMEM39A-202ENST00000438581 HSPA1LP34931 641 aa9.29□□□□□ -0.92
TMEM39A-202ENST00000438581 PSEN1P49768 467 aa9.29□□□□□ -0.92
TMEM39A-202ENST00000438581 ME3Q16798 604 aa9.29□□□□□ -0.92
TMEM39A-202ENST00000438581 FAM47AQ5JRC9 791 aa9.29□□□□□ -0.92
TMEM39A-202ENST00000438581 GJD4Q96KN9 370 aaPredicted RBP9.29□□□□□ -0.92
TMEM39A-202ENST00000438581 ZNF804BA4D1E1 1349 aa9.29□□□□□ -0.92
TMEM39A-202ENST00000438581 SOS2Q07890 1332 aaPredicted RBP9.29□□□□□ -0.92
TMEM39A-202ENST00000438581 CIAO1O76071 339 aa9.29□□□□□ -0.92
TMEM39A-202ENST00000438581 ALDH1B1P30837 517 aa9.29□□□□□ -0.92
TMEM39A-202ENST00000438581 SYKP43405 635 aa9.29□□□□□ -0.92
TMEM39A-202ENST00000438581 PPFIBP1Q86W92 1011 aa9.29□□□□□ -0.92
TMEM39A-202ENST00000438581 C2CD5Q86YS7 1000 aa9.29□□□□□ -0.92
TMEM39A-202ENST00000438581 PLCD3Q8N3E9 789 aa9.29□□□□□ -0.92
TMEM39A-202ENST00000438581 CERKQ8TCT0 537 aa9.29□□□□□ -0.92
TMEM39A-202ENST00000438581 DSCC1Q9BVC3 393 aa9.29□□□□□ -0.92
TMEM39A-202ENST00000438581 TCP11L1Q9NUJ3 509 aa9.29□□□□□ -0.92
TMEM39A-202ENST00000438581 NRKQ7Z2Y5 1582 aa9.29□□□□□ -0.92
TMEM39A-202ENST00000438581 SCNN1DP51172 638 aa9.29□□□□□ -0.92
TMEM39A-202ENST00000438581 CHMP4BP1P59074 171 aa9.29□□□□□ -0.92
TMEM39A-202ENST00000438581 MYBPC2Q14324 1141 aa9.29□□□□□ -0.92
TMEM39A-202ENST00000438581 TMEM266Q2M3C6 531 aa9.29□□□□□ -0.92
TMEM39A-202ENST00000438581 MARCH10Q8NA82 808 aaPredicted RBP9.29□□□□□ -0.92
TMEM39A-202ENST00000438581 TTF2Q9UNY4 1162 aaKnown RBP9.29□□□□□ -0.92
TMEM39A-202ENST00000438581 V9GY48 417 aaPredicted RBP9.29□□□□□ -0.92
TMEM39A-202ENST00000438581 CD163L1Q9NR16 1453 aa9.29□□□□□ -0.92
TMEM39A-202ENST00000438581 SMTNL1A8MU46 457 aa9.28□□□□□ -0.92
TMEM39A-202ENST00000438581 PPIP5K2O43314 1243 aa9.28□□□□□ -0.92
TMEM39A-202ENST00000438581 RPS6KA4O75676 772 aa9.28□□□□□ -0.92
TMEM39A-202ENST00000438581 CD2BP2O95400 341 aaKnown RBP9.28□□□□□ -0.92
TMEM39A-202ENST00000438581 AFMP43652 599 aa9.28□□□□□ -0.92
TMEM39A-202ENST00000438581 KIAA0825Q8IV33 1275 aa9.28□□□□□ -0.92
TMEM39A-202ENST00000438581 IFNL3Q8IZI9 196 aa9.28□□□□□ -0.92
TMEM39A-202ENST00000438581 TMEM87BQ96K49 555 aa9.28□□□□□ -0.92
TMEM39A-202ENST00000438581 RAB34Q9BZG1 259 aa9.28□□□□□ -0.92
TMEM39A-202ENST00000438581 LSG1Q9H089 658 aaKnown RBP9.28□□□□□ -0.92
TMEM39A-202ENST00000438581 ANAPC4Q9UJX5 808 aa9.28□□□□□ -0.92
TMEM39A-202ENST00000438581 FER1L4A9Z1Z3 1794 aa9.28□□□□□ -0.92
TMEM39A-202ENST00000438581 SPTLC2O15270 562 aa9.28□□□□□ -0.92
TMEM39A-202ENST00000438581 UBE4AQ14139 1066 aa9.28□□□□□ -0.92
TMEM39A-202ENST00000438581 CCDC178Q5BJE1 867 aa9.28□□□□□ -0.92
TMEM39A-202ENST00000438581 PI4K2BQ8TCG2 481 aa9.28□□□□□ -0.92
TMEM39A-202ENST00000438581 ZNF830Q96NB3 372 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms