RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 SEC63Q9UGP8 760 aaKnown RBP7.61□□□□□ -1.19
CSDE1-205ENST00000438362 MYO6Q9UM54 1294 aa7.61□□□□□ -1.19
CSDE1-205ENST00000438362 POLR2DO15514 142 aaKnown RBP7.61□□□□□ -1.19
CSDE1-205ENST00000438362 TRIM21P19474 475 aaKnown RBP7.61□□□□□ -1.19
CSDE1-205ENST00000438362 PPP2R3AQ06190 1150 aa7.61□□□□□ -1.19
CSDE1-205ENST00000438362 ZNF569Q5MCW4 686 aa7.61□□□□□ -1.19
CSDE1-205ENST00000438362 ZMYM1Q5SVZ6 1142 aa7.61□□□□□ -1.19
CSDE1-205ENST00000438362 CABP5Q9NP86 173 aa7.61□□□□□ -1.19
CSDE1-205ENST00000438362 ZC3H13Q5T200 1668 aaKnown RBP7.61□□□□□ -1.19
CSDE1-205ENST00000438362 MYO3AQ8NEV4 1616 aa7.61□□□□□ -1.19
CSDE1-205ENST00000438362 DEXIO95424 95 aa7.61□□□□□ -1.19
CSDE1-205ENST00000438362 ITGA6P23229 1130 aa7.61□□□□□ -1.19
CSDE1-205ENST00000438362 STAT6P42226 847 aa7.61□□□□□ -1.19
CSDE1-205ENST00000438362 ETF1P62495 437 aaKnown RBP7.61□□□□□ -1.19
CSDE1-205ENST00000438362 PIP4K2BP78356 416 aa7.61□□□□□ -1.19
CSDE1-205ENST00000438362 CNGA4Q8IV77 575 aa7.61□□□□□ -1.19
CSDE1-205ENST00000438362 TAF4BQ92750 862 aa7.61□□□□□ -1.19
CSDE1-205ENST00000438362 ZKSCAN3Q9BRR0 538 aa7.61□□□□□ -1.19
CSDE1-205ENST00000438362 FTOQ9C0B1 505 aaKnown RBP eCLIP7.61□□□□□ -1.19
CSDE1-205ENST00000438362 KAT14Q9H8E8 782 aa7.61□□□□□ -1.19
CSDE1-205ENST00000438362 PUF60Q9UHX1 559 aaKnown RBP7.61□□□□□ -1.19
CSDE1-205ENST00000438362 RTL9Q8NET4 1388 aa7.61□□□□□ -1.19
CSDE1-205ENST00000438362 MYO1BO43795 1136 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 FGAP02671 866 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 CYLC1P35663 651 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-205ENST00000438362 KRT2P35908 639 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 AMPD3Q01432 767 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 ERCC6LQ2NKX8 1250 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 SPECC1Q5M775 1068 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 FAM114A1Q8IWE2 563 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 IQUBQ8NA54 791 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 MIGA1Q8NAN2 632 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 RAB34Q9BZG1 259 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 CENPHQ9H3R5 247 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 PODXL2Q9NZ53 605 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 CAMSAP1Q5T5Y3 1602 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 COL3A1P02461 1466 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-205ENST00000438362 VWDEQ8N2E2 1590 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 PSMA7O14818 248 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 CALM1P0DP23 149 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 CALM2P0DP24 149 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 CALM3P0DP25 149 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 PTPN12Q05209 780 aaKnown RBP7.6□□□□□ -1.19
CSDE1-205ENST00000438362 TOB2Q14106 344 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-205ENST00000438362 IGSF22Q8N9C0 903 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 CCDC43Q96MW1 224 aaKnown RBP7.6□□□□□ -1.19
CSDE1-205ENST00000438362 MYL10Q9BUA6 226 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 JADE2Q9NQC1 790 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 SPTLC3Q9NUV7 552 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 TUBBP07437 444 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 ADD1P35611 737 aaKnown RBP7.6□□□□□ -1.19
CSDE1-205ENST00000438362 CKAP4Q07065 602 aaKnown RBP7.6□□□□□ -1.19
CSDE1-205ENST00000438362 LRRC24Q50LG9 513 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 TDRD12Q587J7 1177 aaKnown RBP7.6□□□□□ -1.19
CSDE1-205ENST00000438362 CTR9Q6PD62 1173 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 TSG101Q99816 390 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 CRNKL1Q9BZJ0 848 aaKnown RBP7.6□□□□□ -1.19
CSDE1-205ENST00000438362 GPR108Q9NPR9 543 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 TCEAL9Q9UHQ7 104 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 CLIC4Q9Y696 253 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 KIDINS220Q9ULH0 1771 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 A0A087WWV3 80 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 SHTN1A0MZ66 631 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 PSDA5PKW4 1024 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-205ENST00000438362 PNOCQ13519 176 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 POSTNQ15063 836 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 TTLL7Q6ZT98 887 aa7.6□□□□□ -1.19
CSDE1-205ENST00000438362 DZIP3Q86Y13 1208 aaKnown RBP7.6□□□□□ -1.19
CSDE1-205ENST00000438362 USP31Q70CQ4 1352 aa7.59□□□□□ -1.19
CSDE1-205ENST00000438362 RPAP1Q9BWH6 1393 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-205ENST00000438362 CARMIL3Q8ND23 1372 aa7.59□□□□□ -1.19
CSDE1-205ENST00000438362 MAGEB6P1A0A0J9YX57 407 aa7.59□□□□□ -1.19
CSDE1-205ENST00000438362 ERLIN2O94905 339 aa7.59□□□□□ -1.19
CSDE1-205ENST00000438362 IDEP14735 1019 aa7.59□□□□□ -1.19
CSDE1-205ENST00000438362 TMEM266Q2M3C6 531 aa7.59□□□□□ -1.19
CSDE1-205ENST00000438362 CALML4Q96GE6 196 aa7.59□□□□□ -1.19
CSDE1-205ENST00000438362 ALS2CR12Q96Q35 445 aa7.59□□□□□ -1.19
CSDE1-205ENST00000438362 ADGRB2O60241 1585 aa7.59□□□□□ -1.19
CSDE1-205ENST00000438362 AKR1B10O60218 316 aa7.59□□□□□ -1.19
CSDE1-205ENST00000438362 CALML3P27482 149 aa7.59□□□□□ -1.19
CSDE1-205ENST00000438362 SYCP1Q15431 976 aa7.59□□□□□ -1.19
CSDE1-205ENST00000438362 DPCR1Q3MIW9 517 aa7.59□□□□□ -1.19
CSDE1-205ENST00000438362 CT47A1Q5JQC4 288 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-205ENST00000438362 SPECC1LQ69YQ0 1117 aa7.59□□□□□ -1.19
CSDE1-205ENST00000438362 LINC00301Q8NCQ3 95 aa7.59□□□□□ -1.19
CSDE1-205ENST00000438362 PGBD1Q96JS3 809 aa7.59□□□□□ -1.19
CSDE1-205ENST00000438362 POLR3EQ9NVU0 708 aa7.59□□□□□ -1.19
CSDE1-205ENST00000438362 DLC1Q96QB1 1528 aa7.59□□□□□ -1.19
CSDE1-205ENST00000438362 MAST3O60307 1309 aa7.59□□□□□ -1.19
CSDE1-205ENST00000438362 SH3TC1Q8TE82 1336 aa7.59□□□□□ -1.19
CSDE1-205ENST00000438362 ZNF532Q9HCE3 1301 aa7.59□□□□□ -1.19
CSDE1-205ENST00000438362 MYOM1P52179 1685 aa7.59□□□□□ -1.19
CSDE1-205ENST00000438362 VWA3AA6NCI4 1184 aa7.59□□□□□ -1.2
CSDE1-205ENST00000438362 RHOXF2BP0C7M4 288 aa7.59□□□□□ -1.2
CSDE1-205ENST00000438362 RDXP35241 583 aaKnown RBP7.59□□□□□ -1.2
CSDE1-205ENST00000438362 DMTNQ08495 405 aa7.59□□□□□ -1.2
CSDE1-205ENST00000438362 TCIRG1Q13488 830 aa7.59□□□□□ -1.2
CSDE1-205ENST00000438362 PUM3Q15397 648 aaKnown RBP7.59□□□□□ -1.2
CSDE1-205ENST00000438362 RHOXF2Q9BQY4 288 aa7.59□□□□□ -1.2
CSDE1-205ENST00000438362 IL25Q9H293 177 aa7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms