RNA–Protein interactions for RNA: ENST00000436881.2

C9orf172-201, Transcript of Uncharacterized protein C9orf172, humanhuman

APPRIS P1 BASIC

Gene C9orf172, Length 4,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf172-201ENST00000436881 MATR3P43243 847 aaKnown RBP eCLIP18.27■□□□□ 0.52
C9orf172-201ENST00000436881 ASIC1P78348 528 aa18.27■□□□□ 0.52
C9orf172-201ENST00000436881 CUL4AQ13619 759 aa18.27■□□□□ 0.52
C9orf172-201ENST00000436881 ENOX2Q16206 610 aaKnown RBP18.27■□□□□ 0.52
C9orf172-201ENST00000436881 CDC37L1Q7L3B6 337 aa18.27■□□□□ 0.52
C9orf172-201ENST00000436881 GTF3C6Q969F1 213 aa18.27■□□□□ 0.52
C9orf172-201ENST00000436881 PDLIM2Q96JY6 352 aa18.27■□□□□ 0.52
C9orf172-201ENST00000436881 EYA3Q99504 573 aa18.27■□□□□ 0.52
C9orf172-201ENST00000436881 CLSTN2Q9H4D0 955 aa18.27■□□□□ 0.52
C9orf172-201ENST00000436881 POTEJP0CG39 1038 aa18.27■□□□□ 0.52
C9orf172-201ENST00000436881 WDR66Q8TBY9 1149 aa18.27■□□□□ 0.52
C9orf172-201ENST00000436881 GTPBP4Q9BZE4 634 aaKnown RBP18.27■□□□□ 0.52
C9orf172-201ENST00000436881 PODXL2Q9NZ53 605 aa18.27■□□□□ 0.52
C9orf172-201ENST00000436881 JAG2Q9Y219 1238 aa18.27■□□□□ 0.52
C9orf172-201ENST00000436881 H0YHG0 523 aa18.27■□□□□ 0.51
C9orf172-201ENST00000436881 DTHD1Q6ZMT9 781 aa18.27■□□□□ 0.51
C9orf172-201ENST00000436881 HDAC9Q9UKV0 1011 aa18.27■□□□□ 0.51
C9orf172-201ENST00000436881 NCOA3Q9Y6Q9 1424 aa18.27■□□□□ 0.51
C9orf172-201ENST00000436881 DIS3L2Q8IYB7 885 aaKnown RBP18.26■□□□□ 0.51
C9orf172-201ENST00000436881 MYL5Q02045 173 aa18.26■□□□□ 0.51
C9orf172-201ENST00000436881 USP21Q9UK80 565 aa18.26■□□□□ 0.51
C9orf172-201ENST00000436881 AKR1B10O60218 316 aa18.26■□□□□ 0.51
C9orf172-201ENST00000436881 TEX11Q8IYF3 940 aa18.26■□□□□ 0.51
C9orf172-201ENST00000436881 MAP4K1Q92918 833 aa18.26■□□□□ 0.51
C9orf172-201ENST00000436881 ZNF274Q96GC6 653 aaPredicted RBP18.26■□□□□ 0.51
C9orf172-201ENST00000436881 GPR108Q9NPR9 543 aa18.26■□□□□ 0.51
C9orf172-201ENST00000436881 ADGRB3O60242 1522 aa18.26■□□□□ 0.51
C9orf172-201ENST00000436881 KRT79Q5XKE5 535 aa18.26■□□□□ 0.51
C9orf172-201ENST00000436881 IFNKQ9P0W0 207 aa18.26■□□□□ 0.51
C9orf172-201ENST00000436881 PNPLA6Q8IY17 1366 aa18.25■□□□□ 0.51
C9orf172-201ENST00000436881 TBCAO75347 108 aaKnown RBP18.25■□□□□ 0.51
C9orf172-201ENST00000436881 OTUD7BQ6GQQ9 843 aa18.25■□□□□ 0.51
C9orf172-201ENST00000436881 EHBP1Q8NDI1 1231 aa18.25■□□□□ 0.51
C9orf172-201ENST00000436881 ALS2CR12Q96Q35 445 aa18.25■□□□□ 0.51
C9orf172-201ENST00000436881 CERS3Q8IU89 383 aa18.25■□□□□ 0.51
C9orf172-201ENST00000436881 LSG1Q9H089 658 aaKnown RBP18.25■□□□□ 0.51
C9orf172-201ENST00000436881 DBNLQ9UJU6 430 aaKnown RBP18.25■□□□□ 0.51
C9orf172-201ENST00000436881 POTEB2H3BUK9 544 aa18.25■□□□□ 0.51
C9orf172-201ENST00000436881 MCM7P33993 719 aa18.25■□□□□ 0.51
C9orf172-201ENST00000436881 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.25■□□□□ 0.51
C9orf172-201ENST00000436881 V9GYY5 206 aaPredicted RBP18.25■□□□□ 0.51
C9orf172-201ENST00000436881 ALKQ9UM73 1620 aa18.24■□□□□ 0.51
C9orf172-201ENST00000436881 CYP2E1P05181 493 aaPredicted RBP18.24■□□□□ 0.51
C9orf172-201ENST00000436881 CETN2P41208 172 aa18.24■□□□□ 0.51
C9orf172-201ENST00000436881 FAM193AP78312 1265 aa18.24■□□□□ 0.51
C9orf172-201ENST00000436881 RBM17Q96I25 401 aaKnown RBP18.24■□□□□ 0.51
C9orf172-201ENST00000436881 BCL2L12Q9HB09 334 aa18.24■□□□□ 0.51
C9orf172-201ENST00000436881 ABCA9Q8IUA7 1624 aa18.24■□□□□ 0.51
C9orf172-201ENST00000436881 LMTK2Q8IWU2 1503 aa18.24■□□□□ 0.51
C9orf172-201ENST00000436881 WDR17Q8IZU2 1322 aa18.24■□□□□ 0.51
C9orf172-201ENST00000436881 HSPD1P10809 573 aaKnown RBP18.24■□□□□ 0.51
C9orf172-201ENST00000436881 CYLC1P35663 651 aaPredicted RBP18.24■□□□□ 0.51
C9orf172-201ENST00000436881 FAM98CQ17RN3 349 aaKnown RBP18.24■□□□□ 0.51
C9orf172-201ENST00000436881 LRRC24Q50LG9 513 aa18.24■□□□□ 0.51
C9orf172-201ENST00000436881 PPP4R3AQ6IN85 833 aa18.24■□□□□ 0.51
C9orf172-201ENST00000436881 SEC62Q99442 399 aaKnown RBP18.24■□□□□ 0.51
C9orf172-201ENST00000436881 RGS12O14924 1447 aa18.24■□□□□ 0.51
C9orf172-201ENST00000436881 PRDM1O75626 825 aa18.24■□□□□ 0.51
C9orf172-201ENST00000436881 GIGYF2Q6Y7W6 1299 aaKnown RBP18.24■□□□□ 0.51
C9orf172-201ENST00000436881 CENPHQ9H3R5 247 aa18.24■□□□□ 0.51
C9orf172-201ENST00000436881 PARP3Q9Y6F1 533 aa18.24■□□□□ 0.51
C9orf172-201ENST00000436881 V9GY48 417 aaPredicted RBP18.24■□□□□ 0.51
C9orf172-201ENST00000436881 MAP3K15Q6ZN16 1313 aa18.24■□□□□ 0.51
C9orf172-201ENST00000436881 UFL1O94874 794 aa18.23■□□□□ 0.51
C9orf172-201ENST00000436881 U2AF2P26368 475 aaKnown RBP eCLIP18.23■□□□□ 0.51
C9orf172-201ENST00000436881 AKNAD1Q5T1N1 836 aa18.23■□□□□ 0.51
C9orf172-201ENST00000436881 KRT40Q6A162 431 aa18.23■□□□□ 0.51
C9orf172-201ENST00000436881 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.23■□□□□ 0.51
C9orf172-201ENST00000436881 DNAI1Q9UI46 699 aa18.23■□□□□ 0.51
C9orf172-201ENST00000436881 SETBP1Q9Y6X0 1596 aa18.23■□□□□ 0.51
C9orf172-201ENST00000436881 RPS8P62241 208 aaKnown RBP18.23■□□□□ 0.51
C9orf172-201ENST00000436881 KCNH3Q9ULD8 1083 aa18.23■□□□□ 0.51
C9orf172-201ENST00000436881 PATL2C9JE40 543 aaKnown RBP18.23■□□□□ 0.51
C9orf172-201ENST00000436881 CUTAO60888 179 aa18.23■□□□□ 0.51
C9orf172-201ENST00000436881 TNNI2P48788 182 aa18.23■□□□□ 0.51
C9orf172-201ENST00000436881 RASEFQ8IZ41 740 aa18.23■□□□□ 0.51
C9orf172-201ENST00000436881 TMX1Q9H3N1 280 aa18.23■□□□□ 0.51
C9orf172-201ENST00000436881 MED14O60244 1454 aa18.23■□□□□ 0.51
C9orf172-201ENST00000436881 TPCN1Q9ULQ1 816 aa18.22■□□□□ 0.51
C9orf172-201ENST00000436881 MTMR6Q9Y217 621 aa18.22■□□□□ 0.51
C9orf172-201ENST00000436881 RIMBP2O15034 1052 aa18.22■□□□□ 0.51
C9orf172-201ENST00000436881 PARP1P09874 1014 aaKnown RBP18.22■□□□□ 0.51
C9orf172-201ENST00000436881 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.22■□□□□ 0.51
C9orf172-201ENST00000436881 SAMM50Q9Y512 469 aa18.22■□□□□ 0.51
C9orf172-201ENST00000436881 VWA3AA6NCI4 1184 aa18.22■□□□□ 0.51
C9orf172-201ENST00000436881 STX17P56962 302 aa18.22■□□□□ 0.51
C9orf172-201ENST00000436881 TSPYL1Q9H0U9 437 aa18.22■□□□□ 0.51
C9orf172-201ENST00000436881 PRAMEF22A3QJZ6 481 aa18.21■□□□□ 0.51
C9orf172-201ENST00000436881 CIAO1O76071 339 aa18.21■□□□□ 0.51
C9orf172-201ENST00000436881 CNKSR2Q8WXI2 1034 aa18.21■□□□□ 0.51
C9orf172-201ENST00000436881 GGA1Q9UJY5 639 aa18.21■□□□□ 0.51
C9orf172-201ENST00000436881 PDE6AP16499 860 aa18.21■□□□□ 0.51
C9orf172-201ENST00000436881 SYCP3Q8IZU3 236 aa18.21■□□□□ 0.51
C9orf172-201ENST00000436881 SPAG5Q96R06 1193 aa18.21■□□□□ 0.51
C9orf172-201ENST00000436881 ZNF174Q15697 407 aa18.21■□□□□ 0.51
C9orf172-201ENST00000436881 SMARCC2Q8TAQ2 1214 aa18.21■□□□□ 0.51
C9orf172-201ENST00000436881 PHKBQ93100 1093 aa18.21■□□□□ 0.51
C9orf172-201ENST00000436881 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.21■□□□□ 0.57e-9■■■■■ 28.8
C9orf172-201ENST00000436881 BICDL2A1A5D9 508 aa18.2■□□□□ 0.5
C9orf172-201ENST00000436881 SPDYE3A6NKU9 549 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms